Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:51898860-52118893

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125432 14 51902976 to 51902978 2 + TSS region transcription start site region 125432
Ndrg2 14 51905271 to 51914092 8821 - protein coding gene N-myc downstream regulated gene 2
Tssr128441 14 51905805 to 51905816 11 - TSS region transcription start site region 128441
Tssr125433 14 51908063 to 51908080 17 + TSS region transcription start site region 125433
Tssr125434 14 51908088 to 51908099 11 + TSS region transcription start site region 125434
Tssr128442 14 51908366 to 51908391 25 - TSS region transcription start site region 128442
Tssr128443 14 51908621 to 51908648 27 - TSS region transcription start site region 128443
Tssr128444 14 51908652 to 51908661 9 - TSS region transcription start site region 128444
Tssr128445 14 51910705 to 51910739 34 - TSS region transcription start site region 128445
Tssr128446 14 51910783 to 51910793 10 - TSS region transcription start site region 128446
Tssr128447 14 51911119 to 51911124 5 - TSS region transcription start site region 128447
Tssr128448 14 51911280 to 51911315 35 - TSS region transcription start site region 128448
Tssr128449 14 51911334 to 51911353 19 - TSS region transcription start site region 128449
Tssr128450 14 51911500 to 51911511 11 - TSS region transcription start site region 128450
Tssr128451 14 51911547 to 51911564 17 - TSS region transcription start site region 128451
Tssr128452 14 51911999 to 51912003 4 - TSS region transcription start site region 128452
Tssr128453 14 51912146 to 51912169 23 - TSS region transcription start site region 128453
Tssr128454 14 51912327 to 51912346 19 - TSS region transcription start site region 128454
Tssr128455 14 51912352 to 51912364 12 - TSS region transcription start site region 128455
Cpgi6429 14 51912937 to 51913969 1032 CpG island CpG island 6429
Tssr128456 14 51913348 to 51913391 43 - TSS region transcription start site region 128456
Tssr128457 14 51913393 to 51913398 5 - TSS region transcription start site region 128457
Tssr128458 14 51913570 to 51913577 7 - TSS region transcription start site region 128458
Tssr128459 14 51913945 to 51914012 67 - TSS region transcription start site region 128459
Tssr128460 14 51914065 to 51914076 11 - TSS region transcription start site region 128460
Tssr128461 14 51914091 to 51914102 11 - TSS region transcription start site region 128461
Tssr125435 14 51918418 to 51918430 12 + TSS region transcription start site region 125435
Tppp2 14 51918425 to 51920700 2275 + protein coding gene tubulin polymerization-promoting protein family member 2
Tssr125436 14 51918452 to 51918460 8 + TSS region transcription start site region 125436
Rnase13 14 51921362 to 51922773 1411 - protein coding gene ribonuclease, RNase A family, 13 (non-active)
Tssr128462 14 51922986 to 51922993 7 - TSS region transcription start site region 128462
Tssr128463 14 51923036 to 51923041 5 - TSS region transcription start site region 128463
Tssr128464 14 51923053 to 51923080 27 - TSS region transcription start site region 128464
Tssr4404 14 51923094 to 51923099 5 - TSS region transcription start site region 4404
Tssr4405 14 51923107 to 51923116 9 - TSS region transcription start site region 4405
Tssr4406 14 51923142 to 51923149 7 - TSS region transcription start site region 4406
Tssr128465 14 51923156 to 51923161 5 - TSS region transcription start site region 128465
Gm49076 14 51926264 to 51929660 3396 - lincRNA gene predicted gene, 49076
Gm19259 14 51950279 to 51950636 357 - pseudogene predicted gene, 19259
Cpgi6430 14 51984384 to 51985499 1115 CpG island CpG island 6430
Tssr125437 14 51984488 to 51984513 25 + TSS region transcription start site region 125437
Tssr125438 14 51984526 to 51984538 12 + TSS region transcription start site region 125438
Tssr125439 14 51984696 to 51984721 25 + TSS region transcription start site region 125439
Arhgef40 14 51984719 to 52006251 21532 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 40
Tssr125440 14 51984826 to 51984856 30 + TSS region transcription start site region 125440
Tssr125441 14 51984857 to 51984908 51 + TSS region transcription start site region 125441
Cpgi6431 14 51985953 to 51986106 153 CpG island CpG island 6431
Gm16617 14 51986425 to 51988827 2402 - antisense lncRNA gene predicted gene, 16617
Tssr128466 14 51988832 to 51988837 5 - TSS region transcription start site region 128466
Cpgi6432 14 51989011 to 51989442 431 CpG island CpG island 6432
Tssr125442 14 51989037 to 51989064 27 + TSS region transcription start site region 125442
Cpgi6433 14 51996983 to 51997900 917 CpG island CpG island 6433
Zfp219 14 52006077 to 52020733 14656 - protein coding gene zinc finger protein 219
Cpgi6434 14 52006711 to 52007119 408 CpG island CpG island 6434
Cpgi6435 14 52008656 to 52009662 1006 CpG island CpG island 6435
Tssr128467 14 52008695 to 52008712 17 - TSS region transcription start site region 128467
Tssr128468 14 52008860 to 52008893 33 - TSS region transcription start site region 128468
Tssr128469 14 52008965 to 52008986 21 - TSS region transcription start site region 128469
Tssr128470 14 52009184 to 52009204 20 - TSS region transcription start site region 128470
Tssr128471 14 52009619 to 52009635 16 - TSS region transcription start site region 128471
Tssr128472 14 52009651 to 52009663 12 - TSS region transcription start site region 128472
D14Mit183 14 52010216 to 52010369 153 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 183
Tssr128473 14 52010848 to 52010863 15 - TSS region transcription start site region 128473
Tssr128474 14 52010868 to 52010905 37 - TSS region transcription start site region 128474
Cpgi6436 14 52013844 to 52015160 1316 CpG island CpG island 6436
Tssr128475 14 52014559 to 52014606 47 - TSS region transcription start site region 128475
Tssr128476 14 52014737 to 52014825 88 - TSS region transcription start site region 128476
Tssr128477 14 52014861 to 52014897 36 - TSS region transcription start site region 128477
Tssr125443 14 52014928 to 52014949 21 + TSS region transcription start site region 125443
Tssr125444 14 52014955 to 52014978 23 + TSS region transcription start site region 125444
Tssr128478 14 52014976 to 52015003 27 - TSS region transcription start site region 128478
Tmem253 14 52015658 to 52019794 4136 + protein coding gene transmembrane protein 253
Tssr125445 14 52016816 to 52016844 28 + TSS region transcription start site region 125445
Tssr125446 14 52016849 to 52016879 30 + TSS region transcription start site region 125446
Tssr125447 14 52016884 to 52016897 13 + TSS region transcription start site region 125447
Cpgi6437 14 52019508 to 52020675 1167 CpG island CpG island 6437
Tssr128479 14 52019656 to 52019706 50 - TSS region transcription start site region 128479
Tssr128480 14 52019786 to 52019813 27 - TSS region transcription start site region 128480
Tssr128481 14 52020034 to 52020078 44 - TSS region transcription start site region 128481
Gm49086 14 52020076 to 52021908 1832 + antisense lncRNA gene predicted gene, 49086
Tssr128482 14 52020640 to 52020653 13 - TSS region transcription start site region 128482
Tssr128483 14 52020661 to 52020666 5 - TSS region transcription start site region 128483
Tssr128484 14 52020669 to 52020675 6 - TSS region transcription start site region 128484
Tssr128485 14 52020680 to 52020694 14 - TSS region transcription start site region 128485
Tssr128486 14 52020698 to 52020737 39 - TSS region transcription start site region 128486
Cpgi6438 14 52023211 to 52023463 252 CpG island CpG island 6438
Gm49256 14 52023284 to 52024108 824 + lincRNA gene predicted gene, 49256
Olfr221 14 52035174 to 52036109 935 - protein coding gene olfactory receptor 221
Tssr128487 14 52066161 to 52066169 8 - TSS region transcription start site region 128487
Gm22354 14 52069300 to 52069369 69 + snoRNA gene predicted gene, 22354
Gm8586 14 52069471 to 52070019 548 + pseudogene predicted gene 8586
Gm49258 14 52071523 to 52071927 404 - pseudogene predicted gene, 49258
Hnrnpc 14 52073380 to 52104028 30648 - protein coding gene heterogeneous nuclear ribonucleoprotein C
Tssr128488 14 52078030 to 52078035 5 - TSS region transcription start site region 128488
Tssr128489 14 52079526 to 52079543 17 - TSS region transcription start site region 128489
Tssr128490 14 52080193 to 52080198 5 - TSS region transcription start site region 128490
D930017J03Rik 14 52084592 to 52089687 5095 unclassified gene RIKEN cDNA D930017J03 gene
Tssr128491 14 52088822 to 52088827 5 - TSS region transcription start site region 128491
Tssr128492 14 52095801 to 52095805 4 - TSS region transcription start site region 128492
Cpgi6439 14 52103422 to 52104498 1076 CpG island CpG island 6439
Tssr128493 14 52103991 to 52104011 20 - TSS region transcription start site region 128493
Tssr128494 14 52104015 to 52104026 11 - TSS region transcription start site region 128494
Rpgrip1 14 52110704 to 52163546 52842 + protein coding gene retinitis pigmentosa GTPase regulator interacting protein 1
Tssr125448 14 52110910 to 52110932 22 + TSS region transcription start site region 125448
Tssr125449 14 52110939 to 52110953 14 + TSS region transcription start site region 125449