Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:51520669-52520675

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232 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7247 14 51361756 to 51569982 208226 + protein coding gene predicted gene 7247
Gm5622 14 51552790 to 51662953 110163 + protein coding gene predicted gene 5622
Gm16290 14 51556635 to 51559358 2723 - pseudogene predicted gene 16290
Gm17175 14 51568892 to 51574063 5171 - protein coding gene predicted gene 17175
Gm19156 14 51579731 to 51580195 464 + pseudogene predicted gene, 19156
Gm17174 14 51587653 to 51592139 4486 - protein coding gene predicted gene 17174
Gm19157 14 51598894 to 51599374 480 + pseudogene predicted gene, 19157
Gm17078 14 51608892 to 51611148 2256 - protein coding gene predicted gene 17078
Gm19158 14 51618064 to 51618541 477 + pseudogene predicted gene, 19158
Gm4181 14 51630273 to 51635666 5393 - protein coding gene predicted gene 4181
Gm17186 14 51679863 to 51682065 2202 - pseudogene predicted gene 17186
Gm17079 14 51693036 to 51695319 2283 - protein coding gene predicted gene 17079
Gm5800 14 51711644 to 51717132 5488 - protein coding gene predicted gene 5800
Cpgi6424 14 51738787 to 51739099 312 CpG island CpG island 6424
Cpgi6425 14 51739375 to 51739778 403 CpG island CpG island 6425
D14Mit255b 14 51739938 to 51740082 144 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 255b
Cpgi6426 14 51740561 to 51741206 645 CpG island CpG island 6426
Gm49261 14 51741105 to 51741322 217 + pseudogene predicted gene, 49261
Ear-ps3 14 51753505 to 51753949 444 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 3
Ang4 14 51763892 to 51773590 9698 - protein coding gene angiogenin, ribonuclease A family, member 4
Tssr128438 14 51773578 to 51773596 18 - TSS region transcription start site region 128438
Ear-ps4 14 51793304 to 51793753 449 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 4
AY358078 14 51800046 to 51826359 26313 + protein coding gene cDNA sequence AY358078
Gm18579 14 51805976 to 51806828 852 + pseudogene predicted gene, 18579
Gm6047 14 51825720 to 51826293 573 + pseudogene predicted gene 6047
Gm27375 14 51837151 to 51837257 106 + miRNA gene predicted gene, 27375
Ear-ps5 14 51838999 to 51839461 462 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 5
Tssr125427 14 51853767 to 51853772 5 + TSS region transcription start site region 125427
Ear6 14 51853768 to 51854643 875 + protein coding gene eosinophil-associated, ribonuclease A family, member 6
Tssr128439 14 51870765 to 51870767 2 - TSS region transcription start site region 128439
Tssr128440 14 51877630 to 51877639 9 - TSS region transcription start site region 128440
Cpgi6427 14 51884658 to 51885427 769 CpG island CpG island 6427
Mettl17 14 51884842 to 51891868 7026 + protein coding gene methyltransferase like 17
Tssr125428 14 51884905 to 51884949 44 + TSS region transcription start site region 125428
Tssr125429 14 51884982 to 51884993 11 + TSS region transcription start site region 125429
Tssr125430 14 51885743 to 51885752 9 + TSS region transcription start site region 125430
Slc39a2 14 51893088 to 51896745 3657 + protein coding gene solute carrier family 39 (zinc transporter), member 2
Tssr125431 14 51893632 to 51893677 45 + TSS region transcription start site region 125431
Cpgi6428 14 51894957 to 51895297 340 CpG island CpG island 6428
Tssr4403 14 51895346 to 51895347 1 - TSS region transcription start site region 4403
Tssr125432 14 51902976 to 51902978 2 + TSS region transcription start site region 125432
Ndrg2 14 51905271 to 51914092 8821 - protein coding gene N-myc downstream regulated gene 2
Tssr128441 14 51905805 to 51905816 11 - TSS region transcription start site region 128441
Tssr125433 14 51908063 to 51908080 17 + TSS region transcription start site region 125433
Tssr125434 14 51908088 to 51908099 11 + TSS region transcription start site region 125434
Tssr128442 14 51908366 to 51908391 25 - TSS region transcription start site region 128442
Tssr128443 14 51908621 to 51908648 27 - TSS region transcription start site region 128443
Tssr128444 14 51908652 to 51908661 9 - TSS region transcription start site region 128444
Tssr128445 14 51910705 to 51910739 34 - TSS region transcription start site region 128445
Tssr128446 14 51910783 to 51910793 10 - TSS region transcription start site region 128446
Tssr128447 14 51911119 to 51911124 5 - TSS region transcription start site region 128447
Tssr128448 14 51911280 to 51911315 35 - TSS region transcription start site region 128448
Tssr128449 14 51911334 to 51911353 19 - TSS region transcription start site region 128449
Tssr128450 14 51911500 to 51911511 11 - TSS region transcription start site region 128450
Tssr128451 14 51911547 to 51911564 17 - TSS region transcription start site region 128451
Tssr128452 14 51911999 to 51912003 4 - TSS region transcription start site region 128452
Tssr128453 14 51912146 to 51912169 23 - TSS region transcription start site region 128453
Tssr128454 14 51912327 to 51912346 19 - TSS region transcription start site region 128454
Tssr128455 14 51912352 to 51912364 12 - TSS region transcription start site region 128455
Cpgi6429 14 51912937 to 51913969 1032 CpG island CpG island 6429
Tssr128456 14 51913348 to 51913391 43 - TSS region transcription start site region 128456
Tssr128457 14 51913393 to 51913398 5 - TSS region transcription start site region 128457
Tssr128458 14 51913570 to 51913577 7 - TSS region transcription start site region 128458
Tssr128459 14 51913945 to 51914012 67 - TSS region transcription start site region 128459
Tssr128460 14 51914065 to 51914076 11 - TSS region transcription start site region 128460
Tssr128461 14 51914091 to 51914102 11 - TSS region transcription start site region 128461
Tssr125435 14 51918418 to 51918430 12 + TSS region transcription start site region 125435
Tppp2 14 51918425 to 51920700 2275 + protein coding gene tubulin polymerization-promoting protein family member 2
Tssr125436 14 51918452 to 51918460 8 + TSS region transcription start site region 125436
Rnase13 14 51921362 to 51922773 1411 - protein coding gene ribonuclease, RNase A family, 13 (non-active)
Tssr128462 14 51922986 to 51922993 7 - TSS region transcription start site region 128462
Tssr128463 14 51923036 to 51923041 5 - TSS region transcription start site region 128463
Tssr128464 14 51923053 to 51923080 27 - TSS region transcription start site region 128464
Tssr4404 14 51923094 to 51923099 5 - TSS region transcription start site region 4404
Tssr4405 14 51923107 to 51923116 9 - TSS region transcription start site region 4405
Tssr4406 14 51923142 to 51923149 7 - TSS region transcription start site region 4406
Tssr128465 14 51923156 to 51923161 5 - TSS region transcription start site region 128465
Gm49076 14 51926264 to 51929660 3396 - lincRNA gene predicted gene, 49076
Gm19259 14 51950279 to 51950636 357 - pseudogene predicted gene, 19259
Cpgi6430 14 51984384 to 51985499 1115 CpG island CpG island 6430
Tssr125437 14 51984488 to 51984513 25 + TSS region transcription start site region 125437
Tssr125438 14 51984526 to 51984538 12 + TSS region transcription start site region 125438
Tssr125439 14 51984696 to 51984721 25 + TSS region transcription start site region 125439
Arhgef40 14 51984719 to 52006251 21532 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 40
Tssr125440 14 51984826 to 51984856 30 + TSS region transcription start site region 125440
Tssr125441 14 51984857 to 51984908 51 + TSS region transcription start site region 125441
Cpgi6431 14 51985953 to 51986106 153 CpG island CpG island 6431
Gm16617 14 51986425 to 51988827 2402 - antisense lncRNA gene predicted gene, 16617
Tssr128466 14 51988832 to 51988837 5 - TSS region transcription start site region 128466
Cpgi6432 14 51989011 to 51989442 431 CpG island CpG island 6432
Tssr125442 14 51989037 to 51989064 27 + TSS region transcription start site region 125442
Cpgi6433 14 51996983 to 51997900 917 CpG island CpG island 6433
Zfp219 14 52006077 to 52020733 14656 - protein coding gene zinc finger protein 219
Cpgi6434 14 52006711 to 52007119 408 CpG island CpG island 6434
Cpgi6435 14 52008656 to 52009662 1006 CpG island CpG island 6435
Tssr128467 14 52008695 to 52008712 17 - TSS region transcription start site region 128467
Tssr128468 14 52008860 to 52008893 33 - TSS region transcription start site region 128468
Tssr128469 14 52008965 to 52008986 21 - TSS region transcription start site region 128469
Tssr128470 14 52009184 to 52009204 20 - TSS region transcription start site region 128470
Tssr128471 14 52009619 to 52009635 16 - TSS region transcription start site region 128471
Tssr128472 14 52009651 to 52009663 12 - TSS region transcription start site region 128472
D14Mit183 14 52010216 to 52010369 153 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 183
Tssr128473 14 52010848 to 52010863 15 - TSS region transcription start site region 128473
Tssr128474 14 52010868 to 52010905 37 - TSS region transcription start site region 128474
Cpgi6436 14 52013844 to 52015160 1316 CpG island CpG island 6436
Tssr128475 14 52014559 to 52014606 47 - TSS region transcription start site region 128475
Tssr128476 14 52014737 to 52014825 88 - TSS region transcription start site region 128476
Tssr128477 14 52014861 to 52014897 36 - TSS region transcription start site region 128477
Tssr125443 14 52014928 to 52014949 21 + TSS region transcription start site region 125443
Tssr125444 14 52014955 to 52014978 23 + TSS region transcription start site region 125444
Tssr128478 14 52014976 to 52015003 27 - TSS region transcription start site region 128478
Tmem253 14 52015658 to 52019794 4136 + protein coding gene transmembrane protein 253
Tssr125445 14 52016816 to 52016844 28 + TSS region transcription start site region 125445
Tssr125446 14 52016849 to 52016879 30 + TSS region transcription start site region 125446
Tssr125447 14 52016884 to 52016897 13 + TSS region transcription start site region 125447
Cpgi6437 14 52019508 to 52020675 1167 CpG island CpG island 6437
Tssr128479 14 52019656 to 52019706 50 - TSS region transcription start site region 128479
Tssr128480 14 52019786 to 52019813 27 - TSS region transcription start site region 128480
Tssr128481 14 52020034 to 52020078 44 - TSS region transcription start site region 128481
Gm49086 14 52020076 to 52021908 1832 + antisense lncRNA gene predicted gene, 49086
Tssr128482 14 52020640 to 52020653 13 - TSS region transcription start site region 128482
Tssr128483 14 52020661 to 52020666 5 - TSS region transcription start site region 128483
Tssr128484 14 52020669 to 52020675 6 - TSS region transcription start site region 128484
Tssr128485 14 52020680 to 52020694 14 - TSS region transcription start site region 128485
Tssr128486 14 52020698 to 52020737 39 - TSS region transcription start site region 128486
Cpgi6438 14 52023211 to 52023463 252 CpG island CpG island 6438
Gm49256 14 52023284 to 52024108 824 + lincRNA gene predicted gene, 49256
Olfr221 14 52035174 to 52036109 935 - protein coding gene olfactory receptor 221
Tssr128487 14 52066161 to 52066169 8 - TSS region transcription start site region 128487
Gm22354 14 52069300 to 52069369 69 + snoRNA gene predicted gene, 22354
Gm8586 14 52069471 to 52070019 548 + pseudogene predicted gene 8586
Gm49258 14 52071523 to 52071927 404 - pseudogene predicted gene, 49258
Hnrnpc 14 52073380 to 52104028 30648 - protein coding gene heterogeneous nuclear ribonucleoprotein C
Tssr128488 14 52078030 to 52078035 5 - TSS region transcription start site region 128488
Tssr128489 14 52079526 to 52079543 17 - TSS region transcription start site region 128489
Tssr128490 14 52080193 to 52080198 5 - TSS region transcription start site region 128490
D930017J03Rik 14 52084592 to 52089687 5095 unclassified gene RIKEN cDNA D930017J03 gene
Tssr128491 14 52088822 to 52088827 5 - TSS region transcription start site region 128491
Tssr128492 14 52095801 to 52095805 4 - TSS region transcription start site region 128492
Cpgi6439 14 52103422 to 52104498 1076 CpG island CpG island 6439
Tssr128493 14 52103991 to 52104011 20 - TSS region transcription start site region 128493
Tssr128494 14 52104015 to 52104026 11 - TSS region transcription start site region 128494
Rpgrip1 14 52110704 to 52163546 52842 + protein coding gene retinitis pigmentosa GTPase regulator interacting protein 1
Tssr125448 14 52110910 to 52110932 22 + TSS region transcription start site region 125448
Tssr125449 14 52110939 to 52110953 14 + TSS region transcription start site region 125449
Cpgi6440 14 52119061 to 52119572 511 CpG island CpG island 6440
Tssr125450 14 52136463 to 52136475 12 + TSS region transcription start site region 125450
Tssr125451 14 52136477 to 52136507 30 + TSS region transcription start site region 125451
Tssr125452 14 52136526 to 52136540 14 + TSS region transcription start site region 125452
Tssr125453 14 52136556 to 52136581 25 + TSS region transcription start site region 125453
Tssr125454 14 52140987 to 52141008 21 + TSS region transcription start site region 125454
Tssr125455 14 52141046 to 52141066 20 + TSS region transcription start site region 125455
Gm18976 14 52143574 to 52144142 568 - pseudogene predicted gene, 18976
Supt16 14 52160419 to 52197239 36820 - protein coding gene suppressor of Ty 16
Tssr128495 14 52160925 to 52160929 4 - TSS region transcription start site region 128495
Tssr128496 14 52175281 to 52175285 4 - TSS region transcription start site region 128496
D14Mit233 14 52175947 to 52176146 199 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 233
D14Dcr2 14 52176043 to 52176140 97 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 2
Tssr128497 14 52180172 to 52180189 17 - TSS region transcription start site region 128497
Tssr128498 14 52180214 to 52180237 23 - TSS region transcription start site region 128498
Tssr128499 14 52180239 to 52180252 13 - TSS region transcription start site region 128499
Cpgi6441 14 52196521 to 52197724 1203 CpG island CpG island 6441
Tssr128500 14 52197150 to 52197173 23 - TSS region transcription start site region 128500
Tssr128501 14 52197182 to 52197207 25 - TSS region transcription start site region 128501
Tssr128502 14 52197216 to 52197267 51 - TSS region transcription start site region 128502
Tssr128503 14 52197405 to 52197465 60 - TSS region transcription start site region 128503
Gm26590 14 52197502 to 52213852 16350 + antisense lncRNA gene predicted gene, 26590
Tssr125456 14 52197511 to 52197518 7 + TSS region transcription start site region 125456
Chd8 14 52198151 to 52257780 59629 - protein coding gene chromodomain helicase DNA binding protein 8
Snord8 14 52209786 to 52209884 98 - snoRNA gene small nucleolar RNA, C/D box 8
Tssr128504 14 52235284 to 52235295 11 - TSS region transcription start site region 128504
Tssr128505 14 52237770 to 52237792 22 - TSS region transcription start site region 128505
Cpgi6442 14 52244158 to 52244747 589 CpG island CpG island 6442
Tssr128506 14 52244451 to 52244523 72 - TSS region transcription start site region 128506
Tssr128507 14 52256332 to 52256339 7 - TSS region transcription start site region 128507
Cpgi6443 14 52257354 to 52258120 766 CpG island CpG island 6443
Tssr128508 14 52257697 to 52257784 87 - TSS region transcription start site region 128508
Tssr128509 14 52257799 to 52257810 11 - TSS region transcription start site region 128509
Gm43766 14 52258811 to 52264227 5416 + unclassified gene predicted gene 43766
Rab2b 14 52261759 to 52279395 17636 - protein coding gene RAB2B, member RAS oncogene family
Tssr128510 14 52262870 to 52262898 28 - TSS region transcription start site region 128510
Tssr128511 14 52269174 to 52269195 21 - TSS region transcription start site region 128511
Gm23758 14 52276531 to 52276620 89 + snoRNA gene predicted gene, 23758
Cpgi6444 14 52278817 to 52280009 1192 CpG island CpG island 6444
Tssr128512 14 52279023 to 52279038 15 - TSS region transcription start site region 128512
Tssr125457 14 52279132 to 52279188 56 + TSS region transcription start site region 125457
Tox4 14 52279146 to 52295509 16363 + protein coding gene TOX high mobility group box family member 4
Tssr128513 14 52279238 to 52279339 101 - TSS region transcription start site region 128513
Tssr128514 14 52279346 to 52279359 13 - TSS region transcription start site region 128514
Tssr125458 14 52279581 to 52279630 49 + TSS region transcription start site region 125458
Mettl3 14 52294841 to 52305128 10287 - protein coding gene methyltransferase like 3
Tssr128515 14 52296431 to 52296435 4 - TSS region transcription start site region 128515
Cpgi6445 14 52304545 to 52305363 818 CpG island CpG island 6445
Tssr125459 14 52304892 to 52304917 25 + TSS region transcription start site region 125459
Tssr128516 14 52305056 to 52305130 74 - TSS region transcription start site region 128516
Sall2 14 52311177 to 52328670 17493 - protein coding gene spalt like transcription factor 2
Cpgi6446 14 52314401 to 52314598 197 CpG island CpG island 6446
Tssr128517 14 52314775 to 52314784 9 - TSS region transcription start site region 128517
Cpgi6447 14 52315562 to 52316383 821 CpG island CpG island 6447
Tssr128518 14 52316113 to 52316142 29 - TSS region transcription start site region 128518