Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:51221635-51894358

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D14Mit257 14 51250813 to 51250907 94 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 257
Tssr125425 14 51253864 to 51253885 21 + TSS region transcription start site region 125425
Rnase2a 14 51255262 to 51256112 850 - protein coding gene ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)
Tssr128435 14 51255746 to 51255753 7 - TSS region transcription start site region 128435
Tssr128436 14 51256123 to 51256138 15 - TSS region transcription start site region 128436
Gm49245 14 51277602 to 51277709 107 + pseudogene predicted gene, 49245
Gm21718 14 51311497 to 51317768 6271 + lincRNA gene predicted gene, 21718
Gm7106 14 51314461 to 51314928 467 + pseudogene predicted gene 7106
4930597G03Rik 14 51317335 to 51345489 28154 - lincRNA gene RIKEN cDNA 4930597G03 gene
Gm36641 14 51323272 to 51325312 2040 + lncRNA gene predicted gene, 36641
Tssr128437 14 51345486 to 51345490 4 - TSS region transcription start site region 128437
Cpgi6420 14 51358010 to 51358925 915 CpG island CpG island 6420
Gm7107 14 51358603 to 51359964 1361 + pseudogene predicted gene 7107
Gm16289 14 51361675 to 51361857 182 - pseudogene predicted gene 16289
Gm7247 14 51361756 to 51569982 208226 + protein coding gene predicted gene 7247
Tssr125426 14 51364245 to 51364249 4 + TSS region transcription start site region 125426
Vmn2r-ps110 14 51377298 to 51380987 3689 + pseudogene vomeronasal 2, receptor, pseudogene 110
Cpgi6421 14 51382793 to 51383558 765 CpG island CpG island 6421
Vmn2r88 14 51411001 to 51419527 8526 + protein coding gene vomeronasal 2, receptor 88
Vmn2r-ps111 14 51428777 to 51432293 3516 + pseudogene vomeronasal 2, receptor, pseudogene 111
Cpgi6422 14 51434703 to 51435625 922 CpG island CpG island 6422
Cpgi6423 14 51436110 to 51436435 325 CpG island CpG island 6423
Vmn2r89 14 51451962 to 51461293 9331 + protein coding gene vomeronasal 2, receptor 89
Gm4185 14 51479969 to 51483178 3209 protein coding gene predicted gene 4185
Gm5622 14 51552790 to 51662953 110163 + protein coding gene predicted gene 5622
Gm16290 14 51556635 to 51559358 2723 - pseudogene predicted gene 16290
Gm17175 14 51568892 to 51574063 5171 - protein coding gene predicted gene 17175
Gm19156 14 51579731 to 51580195 464 + pseudogene predicted gene, 19156
Gm17174 14 51587653 to 51592139 4486 - protein coding gene predicted gene 17174
Gm19157 14 51598894 to 51599374 480 + pseudogene predicted gene, 19157
Gm17078 14 51608892 to 51611148 2256 - protein coding gene predicted gene 17078
Gm19158 14 51618064 to 51618541 477 + pseudogene predicted gene, 19158
Gm4181 14 51630273 to 51635666 5393 - protein coding gene predicted gene 4181
Gm17186 14 51679863 to 51682065 2202 - pseudogene predicted gene 17186
Gm17079 14 51693036 to 51695319 2283 - protein coding gene predicted gene 17079
Gm5800 14 51711644 to 51717132 5488 - protein coding gene predicted gene 5800
Cpgi6424 14 51738787 to 51739099 312 CpG island CpG island 6424
Cpgi6425 14 51739375 to 51739778 403 CpG island CpG island 6425
D14Mit255b 14 51739938 to 51740082 144 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 255b
Cpgi6426 14 51740561 to 51741206 645 CpG island CpG island 6426
Gm49261 14 51741105 to 51741322 217 + pseudogene predicted gene, 49261
Ear-ps3 14 51753505 to 51753949 444 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 3
Ang4 14 51763892 to 51773590 9698 - protein coding gene angiogenin, ribonuclease A family, member 4
Tssr128438 14 51773578 to 51773596 18 - TSS region transcription start site region 128438
Ear-ps4 14 51793304 to 51793753 449 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 4
AY358078 14 51800046 to 51826359 26313 + protein coding gene cDNA sequence AY358078
Gm18579 14 51805976 to 51806828 852 + pseudogene predicted gene, 18579
Gm6047 14 51825720 to 51826293 573 + pseudogene predicted gene 6047
Gm27375 14 51837151 to 51837257 106 + miRNA gene predicted gene, 27375
Ear-ps5 14 51838999 to 51839461 462 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 5
Tssr125427 14 51853767 to 51853772 5 + TSS region transcription start site region 125427
Ear6 14 51853768 to 51854643 875 + protein coding gene eosinophil-associated, ribonuclease A family, member 6
Tssr128439 14 51870765 to 51870767 2 - TSS region transcription start site region 128439
Tssr128440 14 51877630 to 51877639 9 - TSS region transcription start site region 128440
Cpgi6427 14 51884658 to 51885427 769 CpG island CpG island 6427
Mettl17 14 51884842 to 51891868 7026 + protein coding gene methyltransferase like 17
Tssr125428 14 51884905 to 51884949 44 + TSS region transcription start site region 125428
Tssr125429 14 51884982 to 51884993 11 + TSS region transcription start site region 125429
Tssr125430 14 51885743 to 51885752 9 + TSS region transcription start site region 125430
Slc39a2 14 51893088 to 51896745 3657 + protein coding gene solute carrier family 39 (zinc transporter), member 2
Tssr125431 14 51893632 to 51893677 45 + TSS region transcription start site region 125431