Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:49227740-52387756

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510 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
ccdc198 14 49226358 to 49246326 19968 - protein coding gene coiled-coil domain containing 198
Tssr128352 14 49241178 to 49241181 3 - TSS region transcription start site region 128352
Tssr128353 14 49245389 to 49245441 52 - TSS region transcription start site region 128353
Slc35f4 14 49298520 to 49525837 227317 - protein coding gene solute carrier family 35, member F4
Gm48940 14 49299836 to 49304512 4676 + antisense lncRNA gene predicted gene, 48940
D14Mit258 14 49398523 to 49398612 89 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 258
D14Mit130 14 49447941 to 49448086 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 130
Gm22116 14 49520029 to 49520169 140 - snRNA gene predicted gene, 22116
D14Mit101 14 49524646 to 49524778 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 101
Cpgi6402 14 49525156 to 49526107 951 CpG island CpG island 6402
Tssr128354 14 49525713 to 49525732 19 - TSS region transcription start site region 128354
Tssr128355 14 49525840 to 49525903 63 - TSS region transcription start site region 128355
Gm22949 14 49573214 to 49573318 104 - miRNA gene predicted gene, 22949
Gm36082 14 49669807 to 49672794 2987 - lncRNA gene predicted gene, 36082
Armh4 14 49681664 to 49783409 101745 - protein coding gene armadillo-like helical domain containing 4
Tssr128356 14 49686515 to 49686520 5 - TSS region transcription start site region 128356
Gm16082 14 49713246 to 49713622 376 - pseudogene predicted gene 16082
Gm36146 14 49722652 to 49744296 21644 + antisense lncRNA gene predicted gene, 36146
Tssr125362 14 49724620 to 49724642 22 + TSS region transcription start site region 125362
Gm48950 14 49736658 to 49738009 1351 - unclassified gene predicted gene, 48950
Gm48948 14 49747251 to 49748193 942 - unclassified gene predicted gene, 48948
Cpgi6403 14 49783191 to 49783555 364 CpG island CpG island 6403
Tssr128357 14 49783327 to 49783394 67 - TSS region transcription start site region 128357
Gm22989 14 49788284 to 49788369 85 + snRNA gene predicted gene, 22989
Gm8417 14 49804016 to 49807240 3224 + pseudogene predicted gene 8417
Olfr722 14 49894258 to 49901941 7683 - protein coding gene olfactory receptor 722
Olfr723 14 49928563 to 49931787 3224 - protein coding gene olfactory receptor 723
Olfr724 14 49960091 to 49961096 1005 - protein coding gene olfactory receptor 724
Gm49133 14 49984923 to 49985274 351 + pseudogene predicted gene, 49133
Olfr725 14 50034314 to 50040375 6061 - protein coding gene olfactory receptor 725
Tssr125363 14 50061357 to 50061361 4 + TSS region transcription start site region 125363
Gm37194 14 50061360 to 50064390 3030 + unclassified gene predicted gene, 37194
Cpgi6404 14 50061680 to 50062676 996 CpG island CpG island 6404
Tssr125364 14 50062280 to 50062293 13 + TSS region transcription start site region 125364
Olfr726 14 50083714 to 50084679 965 - protein coding gene olfactory receptor 726
Olfr727 14 50126553 to 50127587 1034 + protein coding gene olfactory receptor 727
Olfr728 14 50139702 to 50140637 935 - protein coding gene olfactory receptor 728
Olfr729 14 50147901 to 50148872 971 - protein coding gene olfactory receptor 729
Olfr730 14 50186262 to 50187218 956 - protein coding gene olfactory receptor 730
Olfr731 14 50237903 to 50238883 980 - protein coding gene olfactory receptor 731
D14Mit61 14 50277539 to 50277717 178 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 61
Olfr732 14 50281228 to 50282271 1043 - protein coding gene olfactory receptor 732
Olfr733 14 50298337 to 50299330 993 - protein coding gene olfactory receptor 733
Olfr734 14 50319892 to 50320833 941 - protein coding gene olfactory receptor 734
Olfr735 14 50345376 to 50346440 1064 - protein coding gene olfactory receptor 735
Tssr125365 14 50357885 to 50357898 13 + TSS region transcription start site region 125365
Tssr125366 14 50357904 to 50357916 12 + TSS region transcription start site region 125366
Tlr11 14 50357914 to 50363663 5749 + protein coding gene toll-like receptor 11
Tssr4393 14 50381284 to 50381294 10 - TSS region transcription start site region 4393
Tssr128358 14 50381300 to 50381311 11 - TSS region transcription start site region 128358
Tssr128359 14 50381361 to 50381392 31 - TSS region transcription start site region 128359
Olfr736 14 50392758 to 50393696 938 + protein coding gene olfactory receptor 736
Tssr4394 14 50397082 to 50397092 10 - TSS region transcription start site region 4394
Olfr737-ps1 14 50411178 to 50411460 282 - pseudogene olfactory receptor 737, pseudogene 1
Olfr738 14 50413546 to 50414481 935 + protein coding gene olfactory receptor 738
Olfr739 14 50424521 to 50425450 929 + protein coding gene olfactory receptor 739
Olfr740 14 50453054 to 50455678 2624 + protein coding gene olfactory receptor 740
Tssr125367 14 50466030 to 50466033 3 + TSS region transcription start site region 125367
Olfr741 14 50473057 to 50486395 13338 + protein coding gene olfactory receptor 741
4930413M19Rik 14 50503769 to 50520943 17174 + lncRNA gene RIKEN cDNA 4930413M19 gene
Olfr742 14 50515121 to 50516240 1119 + protein coding gene olfactory receptor 742
Olfr743 14 50533414 to 50534349 935 + protein coding gene olfactory receptor 743
Gm19109 14 50552868 to 50553828 960 + pseudogene predicted gene, 19109
Olfr744 14 50618224 to 50619195 971 + protein coding gene olfactory receptor 744
Olfr745 14 50642195 to 50643369 1174 + protein coding gene olfactory receptor 745
Gm45192 14 50645388 to 50645670 282 - pseudogene predicted gene 45192
Olfr746 14 50653239 to 50654183 944 + protein coding gene olfactory receptor 746
Gm18762 14 50670388 to 50672234 1846 + pseudogene predicted gene, 18762
Olfr747 14 50680691 to 50681645 954 - protein coding gene olfactory receptor 747
Olfr748 14 50710332 to 50711255 923 + protein coding gene olfactory receptor 748
Gm24316 14 50731053 to 50731159 106 + snRNA gene predicted gene, 24316
Olfr749 14 50736219 to 50744324 8105 - protein coding gene olfactory receptor 749
Ttc5 14 50765415 to 50785519 20104 - protein coding gene tetratricopeptide repeat domain 5
Tssr125368 14 50769205 to 50769207 2 + TSS region transcription start site region 125368
Gm10916 14 50769248 to 50769730 482 + pseudogene predicted gene 10916
Tssr128360 14 50781214 to 50781219 5 - TSS region transcription start site region 128360
Cpgi6405 14 50785246 to 50785606 360 CpG island CpG island 6405
Gm48938 14 50787816 to 50788239 423 + pseudogene predicted gene, 48938
Ccnb1ip1 14 50789249 to 50795728 6479 - protein coding gene cyclin B1 interacting protein 1
Tssr128361 14 50795689 to 50795705 16 - TSS region transcription start site region 128361
Cpgi6406 14 50805007 to 50805230 223 CpG island CpG island 6406
Rpph1 14 50807449 to 50807767 318 - RNase P RNA gene ribonuclease P RNA component H1
Cpgi6407 14 50807484 to 50808091 607 CpG island CpG island 6407
Tssr125369 14 50807490 to 50807511 21 + TSS region transcription start site region 125369
Tssr128362 14 50807561 to 50807565 4 - TSS region transcription start site region 128362
Tssr128363 14 50807580 to 50807587 7 - TSS region transcription start site region 128363
Tssr128364 14 50807600 to 50807658 58 - TSS region transcription start site region 128364
Tssr128365 14 50807708 to 50807720 12 - TSS region transcription start site region 128365
Tssr128366 14 50807725 to 50807732 7 - TSS region transcription start site region 128366
Tssr128367 14 50807740 to 50807756 16 - TSS region transcription start site region 128367
Tssr128368 14 50807758 to 50807776 18 - TSS region transcription start site region 128368
Parp2 14 50807897 to 50821301 13404 + protein coding gene poly (ADP-ribose) polymerase family, member 2
Tssr125370 14 50807915 to 50807942 27 + TSS region transcription start site region 125370
Tep1 14 50824061 to 50870554 46493 - protein coding gene telomerase associated protein 1
Tssr128369 14 50826880 to 50826894 14 - TSS region transcription start site region 128369
Tssr128370 14 50826919 to 50826941 22 - TSS region transcription start site region 128370
Tssr128371 14 50830038 to 50830075 37 - TSS region transcription start site region 128371
Tssr128372 14 50833939 to 50833977 38 - TSS region transcription start site region 128372
Tssr128373 14 50834033 to 50834058 25 - TSS region transcription start site region 128373
Tssr125371 14 50834738 to 50834784 46 + TSS region transcription start site region 125371
Tssr128374 14 50835670 to 50835678 8 - TSS region transcription start site region 128374
Tssr128375 14 50836384 to 50836399 15 - TSS region transcription start site region 128375
Tssr128376 14 50836451 to 50836464 13 - TSS region transcription start site region 128376
Tssr125372 14 50839792 to 50839830 38 + TSS region transcription start site region 125372
Tssr128377 14 50840522 to 50840525 3 - TSS region transcription start site region 128377
Tssr128378 14 50851140 to 50851157 17 - TSS region transcription start site region 128378
Tssr128379 14 50869350 to 50869355 5 - TSS region transcription start site region 128379
Cpgi6408 14 50870277 to 50870488 211 CpG island CpG island 6408
Tssr125373 14 50870355 to 50870407 52 + TSS region transcription start site region 125373
Gm26782 14 50870469 to 50877205 6736 + antisense lncRNA gene predicted gene, 26782
Tssr128380 14 50870499 to 50870550 51 - TSS region transcription start site region 128380
Tssr128381 14 50870557 to 50870571 14 - TSS region transcription start site region 128381
2310007J06Rik 14 50888581 to 50890566 1985 unclassified non-coding RNA gene RIKEN cDNA 2310007J06 gene
Klhl33 14 50888582 to 50897507 8925 - protein coding gene kelch-like 33
Cpgi6409 14 50892441 to 50892942 501 CpG island CpG island 6409
Tssr125374 14 50896421 to 50896434 13 + TSS region transcription start site region 125374
Cpgi6410 14 50896485 to 50897020 535 CpG island CpG island 6410
Tssr128382 14 50897384 to 50897397 13 - TSS region transcription start site region 128382
Tssr128383 14 50897448 to 50897457 9 - TSS region transcription start site region 128383
Tssr128384 14 50897472 to 50897507 35 - TSS region transcription start site region 128384
Tssr128385 14 50897517 to 50897529 12 - TSS region transcription start site region 128385
Cpgi6411 14 50904135 to 50904441 306 CpG island CpG island 6411
Osgep 14 50915374 to 50924893 9519 - protein coding gene O-sialoglycoprotein endopeptidase
Tssr128386 14 50917322 to 50917336 14 - TSS region transcription start site region 128386
Gm24689 14 50918425 to 50918528 103 + snRNA gene predicted gene, 24689
Cpgi6412 14 50924521 to 50925425 904 CpG island CpG island 6412
Tssr128387 14 50924805 to 50924896 91 - TSS region transcription start site region 128387
Tssr125375 14 50924949 to 50924965 16 + TSS region transcription start site region 125375
Apex1 14 50924968 to 50927139 2171 + protein coding gene apurinic/apyrimidinic endonuclease 1
Tssr125376 14 50924971 to 50925004 33 + TSS region transcription start site region 125376
Tssr125377 14 50925016 to 50925027 11 + TSS region transcription start site region 125377
Tssr125378 14 50925177 to 50925235 58 + TSS region transcription start site region 125378
Tssr125379 14 50926708 to 50926741 33 + TSS region transcription start site region 125379
Tssr125380 14 50927215 to 50927219 4 + TSS region transcription start site region 125380
Pip4p1 14 50927215 to 50930877 3662 - protein coding gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
Tssr125381 14 50930104 to 50930137 33 + TSS region transcription start site region 125381
Cpgi6413 14 50930111 to 50931515 1404 CpG island CpG island 6413
Tssr125382 14 50930140 to 50930160 20 + TSS region transcription start site region 125382
Tssr128388 14 50930261 to 50930283 22 - TSS region transcription start site region 128388
Tssr128389 14 50930311 to 50930329 18 - TSS region transcription start site region 128389
Tssr128390 14 50930832 to 50930878 46 - TSS region transcription start site region 128390
Tssr128391 14 50930881 to 50930890 9 - TSS region transcription start site region 128391
Tssr128392 14 50939077 to 50939091 14 - TSS region transcription start site region 128392
Tssr4395 14 50943259 to 50943261 2 + TSS region transcription start site region 4395
Pnp 14 50944303 to 50953412 9109 + protein coding gene purine-nucleoside phosphorylase
Cpgi6414 14 50944373 to 50944804 431 CpG island CpG island 6414
Tssr125383 14 50944499 to 50944514 15 + TSS region transcription start site region 125383
Gm49342 14 50944517 to 50963136 18619 + protein coding gene predicted gene, 49342
Tssr125384 14 50944523 to 50944534 11 + TSS region transcription start site region 125384
Tssr125385 14 50947941 to 50947961 20 + TSS region transcription start site region 125385
Gm38316 14 50950559 to 50952004 1445 - unclassified gene predicted gene, 38316
Tssr125386 14 50951622 to 50951641 19 + TSS region transcription start site region 125386
Tssr125387 14 50952252 to 50952256 4 + TSS region transcription start site region 125387
Tssr125388 14 50952297 to 50952300 3 + TSS region transcription start site region 125388
Tssr125389 14 50956134 to 50956169 35 + TSS region transcription start site region 125389
Pnp2 14 50956141 to 50964751 8610 + protein coding gene purine-nucleoside phosphorylase 2
Tssr125390 14 50964920 to 50964931 11 + TSS region transcription start site region 125390
Gm8518 14 50978447 to 50978936 489 - pseudogene predicted gene 8518
Tssr128393 14 50987653 to 50987656 3 - TSS region transcription start site region 128393
Gm49038 14 50995713 to 50997075 1362 - pseudogene predicted gene, 49038
Rnase10 14 51007751 to 51010758 3007 + protein coding gene ribonuclease, RNase A family, 10 (non-active)
Tssr125391 14 51007911 to 51007920 9 + TSS region transcription start site region 125391
Tssr125392 14 51007941 to 51007948 7 + TSS region transcription start site region 125392
Tssr125393 14 51007950 to 51007975 25 + TSS region transcription start site region 125393
Tssr125394 14 51009016 to 51009027 11 + TSS region transcription start site region 125394
Rnase9 14 51038459 to 51041869 3410 - protein coding gene ribonuclease, RNase A family, 9 (non-active)
Tssr128394 14 51039363 to 51039369 6 - TSS region transcription start site region 128394
Tssr128395 14 51041861 to 51041879 18 - TSS region transcription start site region 128395
Tssr128396 14 51041923 to 51041928 5 - TSS region transcription start site region 128396
Tssr128397 14 51042050 to 51042072 22 - TSS region transcription start site region 128397
Rnase11 14 51049451 to 51050163 712 - protein coding gene ribonuclease, RNase A family, 11 (non-active)
Tssr128398 14 51050665 to 51050671 6 - TSS region transcription start site region 128398
Tssr125395 14 51053538 to 51053564 26 + TSS region transcription start site region 125395
Tssr128399 14 51055682 to 51055695 13 - TSS region transcription start site region 128399
Rnase12 14 51056698 to 51057242 544 - protein coding gene ribonuclease, RNase A family, 12 (non-active)
Tssr128400 14 51057261 to 51057288 27 - TSS region transcription start site region 128400
Tssr128401 14 51057466 to 51057473 7 - TSS region transcription start site region 128401
Tssr128402 14 51057480 to 51057487 7 - TSS region transcription start site region 128402
Tssr128403 14 51057595 to 51057606 11 - TSS region transcription start site region 128403
Tssr128404 14 51057611 to 51057628 17 - TSS region transcription start site region 128404
Tssr128405 14 51057639 to 51057667 28 - TSS region transcription start site region 128405
Tssr128406 14 51057674 to 51057689 15 - TSS region transcription start site region 128406
Tssr128407 14 51060876 to 51060880 4 - TSS region transcription start site region 128407
Cpgi6415 14 51063508 to 51064012 504 CpG island CpG island 6415
n-TLaag8 14 51063883 to 51063964 81 + tRNA gene nuclear encoded tRNA leucine 8 (anticodon AAG)
Cpgi6416 14 51064646 to 51065554 908 CpG island CpG island 6416
n-TPagg4 14 51064814 to 51064885 71 - tRNA gene nuclear encoded tRNA proline 4 (anticodon AGG)
n-TTtgt3 14 51065168 to 51065240 72 - tRNA gene nuclear encoded tRNA threonine 3 (anticodon TGT)
Olfr750 14 51070311 to 51071442 1131 - protein coding gene olfactory receptor 750
n-TLtag2 14 51082830 to 51082911 81 - tRNA gene nuclear encoded tRNA leucine 2 (anticodon TAG)
Cpgi6417 14 51083038 to 51083485 447 CpG island CpG island 6417
n-TTtgt1 14 51088650 to 51088722 72 + tRNA gene nuclear encoded tRNA threonine 1 (anticodon TGT)
Cpgi6418 14 51088783 to 51089649 866 CpG island CpG island 6418
n-TYgta10 14 51089489 to 51089578 89 + tRNA gene nuclear encoded tRNA tyrosine 10 (anticodon GTA)
Cpgi6419 14 51090071 to 51090506 435 CpG island CpG island 6419
Tssr125396 14 51090081 to 51090131 50 + TSS region transcription start site region 125396
n-TPtgg5 14 51090647 to 51090718 71 + tRNA gene nuclear encoded tRNA proline 5 (anticodon TGG)
Rnase4 14 51091077 to 51106151 15074 + protein coding gene ribonuclease, RNase A family 4
Tssr125397 14 51091089 to 51091160 71 + TSS region transcription start site region 125397
Ang 14 51091150 to 51102009 10859 + protein coding gene angiogenin, ribonuclease, RNase A family, 5