Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:49170840-49880903

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6401 14 49171833 to 49173471 1638 CpG island CpG island 6401
Tssr125361 14 49172202 to 49172254 52 + TSS region transcription start site region 125361
Naa30 14 49172246 to 49190888 18642 + protein coding gene N(alpha)-acetyltransferase 30, NatC catalytic subunit
Gm48935 14 49217779 to 49220047 2268 + lincRNA gene predicted gene, 48935
Gm48936 14 49220898 to 49223364 2466 + unclassified gene predicted gene, 48936
ccdc198 14 49226358 to 49246326 19968 - protein coding gene coiled-coil domain containing 198
Tssr128352 14 49241178 to 49241181 3 - TSS region transcription start site region 128352
Tssr128353 14 49245389 to 49245441 52 - TSS region transcription start site region 128353
Slc35f4 14 49298520 to 49525837 227317 - protein coding gene solute carrier family 35, member F4
Gm48940 14 49299836 to 49304512 4676 + antisense lncRNA gene predicted gene, 48940
D14Mit258 14 49398523 to 49398612 89 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 258
D14Mit130 14 49447941 to 49448086 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 130
Gm22116 14 49520029 to 49520169 140 - snRNA gene predicted gene, 22116
D14Mit101 14 49524646 to 49524778 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 101
Cpgi6402 14 49525156 to 49526107 951 CpG island CpG island 6402
Tssr128354 14 49525713 to 49525732 19 - TSS region transcription start site region 128354
Tssr128355 14 49525840 to 49525903 63 - TSS region transcription start site region 128355
Gm22949 14 49573214 to 49573318 104 - miRNA gene predicted gene, 22949
Gm36082 14 49669807 to 49672794 2987 - lncRNA gene predicted gene, 36082
Armh4 14 49681664 to 49783409 101745 - protein coding gene armadillo-like helical domain containing 4
Tssr128356 14 49686515 to 49686520 5 - TSS region transcription start site region 128356
Gm16082 14 49713246 to 49713622 376 - pseudogene predicted gene 16082
Gm36146 14 49722652 to 49744296 21644 + antisense lncRNA gene predicted gene, 36146
Tssr125362 14 49724620 to 49724642 22 + TSS region transcription start site region 125362
Gm48950 14 49736658 to 49738009 1351 - unclassified gene predicted gene, 48950
Gm48948 14 49747251 to 49748193 942 - unclassified gene predicted gene, 48948
Cpgi6403 14 49783191 to 49783555 364 CpG island CpG island 6403
Tssr128357 14 49783327 to 49783394 67 - TSS region transcription start site region 128357
Gm22989 14 49788284 to 49788369 85 + snRNA gene predicted gene, 22989
Gm8417 14 49804016 to 49807240 3224 + pseudogene predicted gene 8417