Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:48623461-48669774

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D14Mit121 14 48626981 to 48627130 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 121
Gm35766 14 48636152 to 48640715 4563 + lincRNA gene predicted gene, 35766
Gm49151 14 48643461 to 48649774 6313 + lincRNA gene predicted gene, 49151
Cpgi6393 14 48651642 to 48651927 285 CpG island CpG island 6393
Gm23469 14 48652499 to 48652602 103 + snRNA gene predicted gene, 23469
Tssr125346 14 48654826 to 48654851 25 + TSS region transcription start site region 125346
Tssr125347 14 48655281 to 48655295 14 + TSS region transcription start site region 125347
Tssr125348 14 48655306 to 48655318 12 + TSS region transcription start site region 125348
Cpgi6394 14 48655333 to 48655490 157 CpG island CpG island 6394
Otx2 14 48657452 to 48667644 10192 - protein coding gene orthodenticle homeobox 2
Cpgi6395 14 48662063 to 48662619 556 CpG island CpG island 6395
Tssr128341 14 48662740 to 48662751 11 - TSS region transcription start site region 128341
Cpgi6396 14 48664899 to 48665545 646 CpG island CpG island 6396
Tssr128342 14 48665098 to 48665115 17 - TSS region transcription start site region 128342
Cpgi6397 14 48665956 to 48667032 1076 CpG island CpG island 6397
Tssr128343 14 48667432 to 48667450 18 - TSS region transcription start site region 128343
Tssr128344 14 48667477 to 48667478 1 - TSS region transcription start site region 128344
Tssr128345 14 48667511 to 48667550 39 - TSS region transcription start site region 128345
Tssr125349 14 48667651 to 48667653 2 + TSS region transcription start site region 125349
Cpgi6398 14 48668834 to 48669205 371 CpG island CpG island 6398
Otx2os1 14 48669288 to 48793348 124060 + lincRNA gene orthodenticle homeobox 2 opposite strand 1