MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 14:48266265-48626276

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mrdq4	14	12546018 to 48527625	35981607		QTL	modifier of retinal degeneration QTL 4
Peli2	14	48120823 to 48281575	160752	+	protein coding gene	pellino 2
1700128I11Rik	14	48360578 to 48362615	2037	-	lincRNA gene	RIKEN cDNA 1700128I11 gene
Gm23881	14	48364337 to 48364402	65	-	miRNA gene	predicted gene, 23881
Gm18962	14	48387114 to 48388005	891	-	pseudogene	predicted gene, 18962
Gm3534	14	48408618 to 48409618	1000	+	pseudogene	predicted pseudogene 3534
Cpgi6391	14	48445985 to 48446831	846		CpG island	CpG island 6391
Tmem260	14	48446123 to 48520708	74585	+	protein coding gene	transmembrane protein 260
Tssr125340	14	48446265 to 48446276	11	+	TSS region	transcription start site region 125340
Tssr125341	14	48446340 to 48446429	89	+	TSS region	transcription start site region 125341
Cpgi6392	14	48451974 to 48452166	192		CpG island	CpG island 6392
Tssr125342	14	48464182 to 48464184	2	+	TSS region	transcription start site region 125342
Gm49519	14	48518236 to 48560287	42051	+	unclassified non-coding RNA gene	predicted gene, 49519
Gm49096	14	48530358 to 48532665	2307	+	unclassified gene	predicted gene, 49096
4930572G02Rik	14	48537991 to 48571888	33897	+	lincRNA gene	RIKEN cDNA 4930572G02 gene
Tssr125343	14	48538347 to 48538367	20	+	TSS region	transcription start site region 125343
Tssr125344	14	48553257 to 48553266	9	+	TSS region	transcription start site region 125344
Tssr125345	14	48580621 to 48580625	4	+	TSS region	transcription start site region 125345
Gm49120	14	48590599 to 48596402	5803	+	lincRNA gene	predicted gene, 49120