Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:47920823-48481575

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930447J18Rik 14 47898864 to 47944189 45325 + lincRNA gene RIKEN cDNA 4930447J18 gene
Gm49303 14 47960019 to 47973713 13694 + lincRNA gene predicted gene, 49303
Gm49304 14 47991528 to 47993803 2275 - lincRNA gene predicted gene, 49304
Tssr128340 14 47993797 to 47993805 8 - TSS region transcription start site region 128340
Gm49305 14 47993941 to 47997714 3773 + lincRNA gene predicted gene, 49305
Tssr4390 14 47995199 to 47995200 1 + TSS region transcription start site region 4390
Gm49306 14 48047011 to 48058470 11459 + lincRNA gene predicted gene, 49306
Gm6055 14 48079375 to 48079752 377 - pseudogene predicted gene 6055
D14Mit4 14 48110224 to 48110419 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 4
Cpgi6389 14 48120483 to 48121813 1330 CpG island CpG island 6389
Tssr125333 14 48120740 to 48120782 42 + TSS region transcription start site region 125333
Tssr125334 14 48120810 to 48120828 18 + TSS region transcription start site region 125334
Peli2 14 48120823 to 48281575 160752 + protein coding gene pellino 2
Tssr125335 14 48120841 to 48120865 24 + TSS region transcription start site region 125335
Tssr125336 14 48120873 to 48120956 83 + TSS region transcription start site region 125336
Tssr125337 14 48120958 to 48120967 9 + TSS region transcription start site region 125337
9530086P17Rik 14 48129485 to 48130163 678 - unclassified gene RIKEN cDNA 9530086P17 gene
Tssr125338 14 48132865 to 48132869 4 + TSS region transcription start site region 125338
Gm49310 14 48134224 to 48137246 3022 + unclassified gene predicted gene, 49310
Gm49307 14 48196760 to 48198030 1270 + unclassified gene predicted gene, 49307
Tssr125339 14 48227126 to 48227130 4 + TSS region transcription start site region 125339
Gm6498 14 48227201 to 48228206 1005 + pseudogene predicted gene 6498
Cpgi6390 14 48235170 to 48235355 185 CpG island CpG island 6390
Tssr4391 14 48250564 to 48250586 22 + TSS region transcription start site region 4391
1700128I11Rik 14 48360578 to 48362615 2037 - lincRNA gene RIKEN cDNA 1700128I11 gene
Gm23881 14 48364337 to 48364402 65 - miRNA gene predicted gene, 23881
Gm18962 14 48387114 to 48388005 891 - pseudogene predicted gene, 18962
Gm3534 14 48408618 to 48409618 1000 + pseudogene predicted pseudogene 3534
Cpgi6391 14 48445985 to 48446831 846 CpG island CpG island 6391
Tmem260 14 48446123 to 48520708 74585 + protein coding gene transmembrane protein 260
Tssr125340 14 48446265 to 48446276 11 + TSS region transcription start site region 125340
Tssr125341 14 48446340 to 48446429 89 + TSS region transcription start site region 125341
Cpgi6392 14 48451974 to 48452166 192 CpG island CpG island 6392
Tssr125342 14 48464182 to 48464184 2 + TSS region transcription start site region 125342