Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:47393387-47943426

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlgap5 14 47387779 to 47418407 30628 - protein coding gene DLG associated protein 5
Tssr125309 14 47395057 to 47395088 31 + TSS region transcription start site region 125309
Tssr128330 14 47395781 to 47395788 7 - TSS region transcription start site region 128330
Cpgi6384 14 47417907 to 47418457 550 CpG island CpG island 6384
Tssr128331 14 47418152 to 47418159 7 - TSS region transcription start site region 128331
Tssr128332 14 47418166 to 47418191 25 - TSS region transcription start site region 128332
Tssr128333 14 47418194 to 47418217 23 - TSS region transcription start site region 128333
Tssr128334 14 47418221 to 47418232 11 - TSS region transcription start site region 128334
Gm8353 14 47419758 to 47420189 431 - pseudogene predicted gene 8353
Tssr125310 14 47421874 to 47421880 6 + TSS region transcription start site region 125310
Gm48975 14 47422417 to 47427570 5153 + lincRNA gene predicted gene, 48975
Cpgi6385 14 47472311 to 47473293 982 CpG island CpG island 6385
Tssr125311 14 47472547 to 47472625 78 + TSS region transcription start site region 125311
Fbxo34 14 47472561 to 47531962 59401 + protein coding gene F-box protein 34
Tssr125312 14 47472628 to 47472640 12 + TSS region transcription start site region 125312
Tssr125313 14 47473116 to 47473141 25 + TSS region transcription start site region 125313
Tssr125314 14 47473502 to 47473505 3 + TSS region transcription start site region 125314
Tssr125315 14 47489788 to 47489793 5 + TSS region transcription start site region 125315
Gm48986 14 47491568 to 47492783 1215 + unclassified gene predicted gene, 48986
Tssr125316 14 47494208 to 47494215 7 + TSS region transcription start site region 125316
Gm35166 14 47502944 to 47508187 5243 - antisense lncRNA gene predicted gene, 35166
Tssr125317 14 47515301 to 47515321 20 + TSS region transcription start site region 125317
Tssr125318 14 47526093 to 47526097 4 + TSS region transcription start site region 125318
Atg14 14 47540893 to 47568434 27541 - protein coding gene autophagy related 14
Gm49004 14 47541980 to 47544217 2237 + antisense lncRNA gene predicted gene, 49004
Cpgi6386 14 47568035 to 47568628 593 CpG island CpG island 6386
Tssr128335 14 47568407 to 47568425 18 - TSS region transcription start site region 128335
Tssr128336 14 47568427 to 47568436 9 - TSS region transcription start site region 128336
Cpgi6387 14 47569347 to 47569536 189 CpG island CpG island 6387
Tssr125319 14 47569406 to 47569410 4 + TSS region transcription start site region 125319
Gm6616 14 47569526 to 47569774 248 + pseudogene predicted gene 6616
Tssr125320 14 47621424 to 47621425 1 + TSS region transcription start site region 125320
Tssr125321 14 47648399 to 47648427 28 + TSS region transcription start site region 125321
Tssr125322 14 47648447 to 47648470 23 + TSS region transcription start site region 125322
Cpgi6388 14 47648784 to 47650159 1375 CpG island CpG island 6388
Ktn1 14 47649100 to 47736564 87464 + protein coding gene kinectin 1
Tssr125323 14 47649102 to 47649120 18 + TSS region transcription start site region 125323
Tssr128337 14 47649214 to 47649264 50 - TSS region transcription start site region 128337
Tssr125324 14 47649293 to 47649389 96 + TSS region transcription start site region 125324
Tssr125325 14 47650386 to 47650389 3 + TSS region transcription start site region 125325
Tssr125326 14 47664235 to 47664258 23 + TSS region transcription start site region 125326
Tssr125327 14 47667310 to 47667322 12 + TSS region transcription start site region 125327
Tssr125328 14 47668387 to 47668426 39 + TSS region transcription start site region 125328
Tssr125329 14 47674791 to 47674811 20 + TSS region transcription start site region 125329
Tssr125330 14 47719787 to 47719804 17 + TSS region transcription start site region 125330
Tssr128338 14 47724042 to 47724044 2 - TSS region transcription start site region 128338
4930538L07Rik 14 47757041 to 47757519 478 - lincRNA gene RIKEN cDNA 4930538L07 gene
Tssr128339 14 47757494 to 47757501 7 - TSS region transcription start site region 128339
Tssr125331 14 47786334 to 47786338 4 + TSS region transcription start site region 125331
Gm41148 14 47791030 to 47805372 14342 - lincRNA gene predicted gene, 41148
Gm49302 14 47800740 to 47801465 725 - lincRNA gene predicted gene, 49302
Gm35360 14 47814235 to 47823090 8855 + lincRNA gene predicted gene, 35360
D14Mit18 14 47817289 to 47817479 190 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 18
Tssr125332 14 47898855 to 47898863 8 + TSS region transcription start site region 125332
4930447J18Rik 14 47898864 to 47944189 45325 + lincRNA gene RIKEN cDNA 4930447J18 gene