Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:47302041-48212519

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139 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mapk1ip1l 14 47298266 to 47323204 24938 + protein coding gene mitogen-activated protein kinase 1 interacting protein 1-like
Gm49189 14 47301982 to 47305485 3503 - antisense lncRNA gene predicted gene, 49189
Tssr4387 14 47307917 to 47307929 12 + TSS region transcription start site region 4387
Tssr125267 14 47310539 to 47310564 25 + TSS region transcription start site region 125267
Tssr125268 14 47310670 to 47310704 34 + TSS region transcription start site region 125268
5830458C19Rik 14 47316473 to 47317489 1016 unclassified gene RIKEN cDNA 5830458C19 gene
Tssr125269 14 47319399 to 47319412 13 + TSS region transcription start site region 125269
Tssr125270 14 47319441 to 47319454 13 + TSS region transcription start site region 125270
Tssr125271 14 47319457 to 47319490 33 + TSS region transcription start site region 125271
Tssr125272 14 47319495 to 47319539 44 + TSS region transcription start site region 125272
Tssr125273 14 47319580 to 47319595 15 + TSS region transcription start site region 125273
Tssr125274 14 47319669 to 47319730 61 + TSS region transcription start site region 125274
Gm49190 14 47320410 to 47321056 646 - pseudogene predicted gene, 49190
Gm41147 14 47341670 to 47355646 13976 - lncRNA gene predicted gene, 41147
Tssr125275 14 47351674 to 47351680 6 + TSS region transcription start site region 125275
Tssr125276 14 47358207 to 47358221 14 + TSS region transcription start site region 125276
Tssr125277 14 47360781 to 47360794 13 + TSS region transcription start site region 125277
Tssr128317 14 47361521 to 47361566 45 - TSS region transcription start site region 128317
Tssr125278 14 47367768 to 47367796 28 + TSS region transcription start site region 125278
Cpgi6383 14 47373715 to 47374403 688 CpG island CpG island 6383
Lgals3 14 47373860 to 47386167 12307 + protein coding gene lectin, galactose binding, soluble 3
Tssr125279 14 47373905 to 47373923 18 + TSS region transcription start site region 125279
Tssr125280 14 47374176 to 47374189 13 + TSS region transcription start site region 125280
Tssr125281 14 47374296 to 47374323 27 + TSS region transcription start site region 125281
Tssr125282 14 47375338 to 47375375 37 + TSS region transcription start site region 125282
Tssr125283 14 47376292 to 47376304 12 + TSS region transcription start site region 125283
Tssr125284 14 47376347 to 47376358 11 + TSS region transcription start site region 125284
Tssr125285 14 47377983 to 47378020 37 + TSS region transcription start site region 125285
Tssr128318 14 47378068 to 47378093 25 - TSS region transcription start site region 128318
Tssr125286 14 47378127 to 47378143 16 + TSS region transcription start site region 125286
Tssr125287 14 47378360 to 47378375 15 + TSS region transcription start site region 125287
Tssr125288 14 47378386 to 47378397 11 + TSS region transcription start site region 125288
Tssr128319 14 47378736 to 47378758 22 - TSS region transcription start site region 128319
Tssr125289 14 47380049 to 47380056 7 + TSS region transcription start site region 125289
Tssr125290 14 47380061 to 47380071 10 + TSS region transcription start site region 125290
Tssr125291 14 47380130 to 47380141 11 + TSS region transcription start site region 125291
Tssr125292 14 47380156 to 47380182 26 + TSS region transcription start site region 125292
Tssr125293 14 47380183 to 47380194 11 + TSS region transcription start site region 125293
Tssr125294 14 47380210 to 47380266 56 + TSS region transcription start site region 125294
Tssr128320 14 47380246 to 47380265 19 - TSS region transcription start site region 128320
Tssr128321 14 47380271 to 47380332 61 - TSS region transcription start site region 128321
Tssr125295 14 47380275 to 47380306 31 + TSS region transcription start site region 125295
Tssr125296 14 47380314 to 47380331 17 + TSS region transcription start site region 125296
Tssr125297 14 47380346 to 47380360 14 + TSS region transcription start site region 125297
Tssr125298 14 47380367 to 47380381 14 + TSS region transcription start site region 125298
Tssr4388 14 47380386 to 47380398 12 + TSS region transcription start site region 4388
Tssr128322 14 47380407 to 47380423 16 - TSS region transcription start site region 128322
Tssr125299 14 47380535 to 47380558 23 + TSS region transcription start site region 125299
Tssr125300 14 47381582 to 47381609 27 + TSS region transcription start site region 125300
Tssr128323 14 47381619 to 47381642 23 - TSS region transcription start site region 128323
Tssr125301 14 47381622 to 47381635 13 + TSS region transcription start site region 125301
Tssr128324 14 47381660 to 47381692 32 - TSS region transcription start site region 128324
Tssr125302 14 47384591 to 47384613 22 + TSS region transcription start site region 125302
Tssr125303 14 47384620 to 47384642 22 + TSS region transcription start site region 125303
Tssr128325 14 47384623 to 47384655 32 - TSS region transcription start site region 128325
Tssr125304 14 47384672 to 47384690 18 + TSS region transcription start site region 125304
Tssr128326 14 47384689 to 47384728 39 - TSS region transcription start site region 128326
Tssr4389 14 47384699 to 47384708 9 + TSS region transcription start site region 4389
Tssr125305 14 47384716 to 47384727 11 + TSS region transcription start site region 125305
Tssr125306 14 47385518 to 47385594 76 + TSS region transcription start site region 125306
Tssr128327 14 47385578 to 47385653 75 - TSS region transcription start site region 128327
Tssr125307 14 47385599 to 47385665 66 + TSS region transcription start site region 125307
Tssr128328 14 47385682 to 47385702 20 - TSS region transcription start site region 128328
Tssr125308 14 47385725 to 47385732 7 + TSS region transcription start site region 125308
Tssr128329 14 47385793 to 47385798 5 - TSS region transcription start site region 128329
Dlgap5 14 47387779 to 47418407 30628 - protein coding gene DLG associated protein 5
Tssr125309 14 47395057 to 47395088 31 + TSS region transcription start site region 125309
Tssr128330 14 47395781 to 47395788 7 - TSS region transcription start site region 128330
Cpgi6384 14 47417907 to 47418457 550 CpG island CpG island 6384
Tssr128331 14 47418152 to 47418159 7 - TSS region transcription start site region 128331
Tssr128332 14 47418166 to 47418191 25 - TSS region transcription start site region 128332
Tssr128333 14 47418194 to 47418217 23 - TSS region transcription start site region 128333
Tssr128334 14 47418221 to 47418232 11 - TSS region transcription start site region 128334
Gm8353 14 47419758 to 47420189 431 - pseudogene predicted gene 8353
Tssr125310 14 47421874 to 47421880 6 + TSS region transcription start site region 125310
Gm48975 14 47422417 to 47427570 5153 + lincRNA gene predicted gene, 48975
Cpgi6385 14 47472311 to 47473293 982 CpG island CpG island 6385
Tssr125311 14 47472547 to 47472625 78 + TSS region transcription start site region 125311
Fbxo34 14 47472561 to 47531962 59401 + protein coding gene F-box protein 34
Tssr125312 14 47472628 to 47472640 12 + TSS region transcription start site region 125312
Tssr125313 14 47473116 to 47473141 25 + TSS region transcription start site region 125313
Tssr125314 14 47473502 to 47473505 3 + TSS region transcription start site region 125314
Tssr125315 14 47489788 to 47489793 5 + TSS region transcription start site region 125315
Gm48986 14 47491568 to 47492783 1215 + unclassified gene predicted gene, 48986
Tssr125316 14 47494208 to 47494215 7 + TSS region transcription start site region 125316
Gm35166 14 47502944 to 47508187 5243 - antisense lncRNA gene predicted gene, 35166
Tssr125317 14 47515301 to 47515321 20 + TSS region transcription start site region 125317
Tssr125318 14 47526093 to 47526097 4 + TSS region transcription start site region 125318
Atg14 14 47540893 to 47568434 27541 - protein coding gene autophagy related 14
Gm49004 14 47541980 to 47544217 2237 + antisense lncRNA gene predicted gene, 49004
Cpgi6386 14 47568035 to 47568628 593 CpG island CpG island 6386
Tssr128335 14 47568407 to 47568425 18 - TSS region transcription start site region 128335
Tssr128336 14 47568427 to 47568436 9 - TSS region transcription start site region 128336
Cpgi6387 14 47569347 to 47569536 189 CpG island CpG island 6387
Tssr125319 14 47569406 to 47569410 4 + TSS region transcription start site region 125319
Gm6616 14 47569526 to 47569774 248 + pseudogene predicted gene 6616
Tssr125320 14 47621424 to 47621425 1 + TSS region transcription start site region 125320
Tssr125321 14 47648399 to 47648427 28 + TSS region transcription start site region 125321
Tssr125322 14 47648447 to 47648470 23 + TSS region transcription start site region 125322
Cpgi6388 14 47648784 to 47650159 1375 CpG island CpG island 6388
Ktn1 14 47649100 to 47736564 87464 + protein coding gene kinectin 1
Tssr125323 14 47649102 to 47649120 18 + TSS region transcription start site region 125323
Tssr128337 14 47649214 to 47649264 50 - TSS region transcription start site region 128337
Tssr125324 14 47649293 to 47649389 96 + TSS region transcription start site region 125324
Tssr125325 14 47650386 to 47650389 3 + TSS region transcription start site region 125325
Tssr125326 14 47664235 to 47664258 23 + TSS region transcription start site region 125326
Tssr125327 14 47667310 to 47667322 12 + TSS region transcription start site region 125327
Tssr125328 14 47668387 to 47668426 39 + TSS region transcription start site region 125328
Tssr125329 14 47674791 to 47674811 20 + TSS region transcription start site region 125329
Tssr125330 14 47719787 to 47719804 17 + TSS region transcription start site region 125330
Tssr128338 14 47724042 to 47724044 2 - TSS region transcription start site region 128338
4930538L07Rik 14 47757041 to 47757519 478 - lincRNA gene RIKEN cDNA 4930538L07 gene
Tssr128339 14 47757494 to 47757501 7 - TSS region transcription start site region 128339
Tssr125331 14 47786334 to 47786338 4 + TSS region transcription start site region 125331
Gm41148 14 47791030 to 47805372 14342 - lincRNA gene predicted gene, 41148
Gm49302 14 47800740 to 47801465 725 - lincRNA gene predicted gene, 49302
Gm35360 14 47814235 to 47823090 8855 + lincRNA gene predicted gene, 35360
D14Mit18 14 47817289 to 47817479 190 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 18
Tssr125332 14 47898855 to 47898863 8 + TSS region transcription start site region 125332
4930447J18Rik 14 47898864 to 47944189 45325 + lincRNA gene RIKEN cDNA 4930447J18 gene
Gm49303 14 47960019 to 47973713 13694 + lincRNA gene predicted gene, 49303
Gm49304 14 47991528 to 47993803 2275 - lincRNA gene predicted gene, 49304
Tssr128340 14 47993797 to 47993805 8 - TSS region transcription start site region 128340
Gm49305 14 47993941 to 47997714 3773 + lincRNA gene predicted gene, 49305
Tssr4390 14 47995199 to 47995200 1 + TSS region transcription start site region 4390
Gm49306 14 48047011 to 48058470 11459 + lincRNA gene predicted gene, 49306
Gm6055 14 48079375 to 48079752 377 - pseudogene predicted gene 6055
D14Mit4 14 48110224 to 48110419 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 4
Cpgi6389 14 48120483 to 48121813 1330 CpG island CpG island 6389
Tssr125333 14 48120740 to 48120782 42 + TSS region transcription start site region 125333
Tssr125334 14 48120810 to 48120828 18 + TSS region transcription start site region 125334
Peli2 14 48120823 to 48281575 160752 + protein coding gene pellino 2
Tssr125335 14 48120841 to 48120865 24 + TSS region transcription start site region 125335
Tssr125336 14 48120873 to 48120956 83 + TSS region transcription start site region 125336
Tssr125337 14 48120958 to 48120967 9 + TSS region transcription start site region 125337
9530086P17Rik 14 48129485 to 48130163 678 - unclassified gene RIKEN cDNA 9530086P17 gene
Tssr125338 14 48132865 to 48132869 4 + TSS region transcription start site region 125338
Gm49310 14 48134224 to 48137246 3022 + unclassified gene predicted gene, 49310
Gm49307 14 48196760 to 48198030 1270 + unclassified gene predicted gene, 49307