Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:47181832-47342186

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gch1 14 47153895 to 47189402 35507 - protein coding gene GTP cyclohydrolase 1
Tssr128311 14 47186953 to 47186957 4 - TSS region transcription start site region 128311
Cpgi6380 14 47188521 to 47189730 1209 CpG island CpG island 6380
Tssr128312 14 47189406 to 47189419 13 - TSS region transcription start site region 128312
Tssr125257 14 47189626 to 47189646 20 + TSS region transcription start site region 125257
Gm49136 14 47199870 to 47200120 250 + pseudogene predicted gene, 49136
Tssr4385 14 47200245 to 47200252 7 + TSS region transcription start site region 4385
Gm49137 14 47214135 to 47214738 603 - pseudogene predicted gene, 49137
Wdhd1 14 47240944 to 47276857 35913 - protein coding gene WD repeat and HMG-box DNA binding protein 1
Gm49149 14 47261832 to 47262186 354 - unclassified gene predicted gene, 49149
Gm24378 14 47270859 to 47270964 105 - snRNA gene predicted gene, 24378
Tssr128313 14 47275349 to 47275354 5 - TSS region transcription start site region 128313
Cpgi6381 14 47276277 to 47277413 1136 CpG island CpG island 6381
Gm49150 14 47276370 to 47276796 426 + antisense lncRNA gene predicted gene, 49150
Tssr128314 14 47276792 to 47276848 56 - TSS region transcription start site region 128314
Tssr128315 14 47276851 to 47276864 13 - TSS region transcription start site region 128315
Tssr125258 14 47276910 to 47276936 26 + TSS region transcription start site region 125258
Tssr125259 14 47276990 to 47277009 19 + TSS region transcription start site region 125259
Tssr125260 14 47277040 to 47277045 5 + TSS region transcription start site region 125260
Tssr4386 14 47277134 to 47277143 9 + TSS region transcription start site region 4386
Socs4 14 47277143 to 47291591 14448 + protein coding gene suppressor of cytokine signaling 4
Tssr128316 14 47277188 to 47277211 23 - TSS region transcription start site region 128316
Tssr125261 14 47287158 to 47287160 2 + TSS region transcription start site region 125261
Tssr125262 14 47291953 to 47291966 13 + TSS region transcription start site region 125262
Tssr125263 14 47292306 to 47292310 4 + TSS region transcription start site region 125263
Gm35078 14 47296399 to 47298405 2006 + protein coding gene predicted gene, 35078
Tssr125264 14 47296509 to 47296545 36 + TSS region transcription start site region 125264
Gm9502 14 47297508 to 47298542 1034 - unclassified gene predicted gene 9502
Cpgi6382 14 47298014 to 47298686 672 CpG island CpG island 6382
Tssr125265 14 47298260 to 47298342 82 + TSS region transcription start site region 125265
Mapk1ip1l 14 47298266 to 47323204 24938 + protein coding gene mitogen-activated protein kinase 1 interacting protein 1-like
Tssr125266 14 47298618 to 47298647 29 + TSS region transcription start site region 125266
Gm49189 14 47301982 to 47305485 3503 - antisense lncRNA gene predicted gene, 49189
Tssr4387 14 47307917 to 47307929 12 + TSS region transcription start site region 4387
Tssr125267 14 47310539 to 47310564 25 + TSS region transcription start site region 125267
Tssr125268 14 47310670 to 47310704 34 + TSS region transcription start site region 125268
5830458C19Rik 14 47316473 to 47317489 1016 unclassified gene RIKEN cDNA 5830458C19 gene
Tssr125269 14 47319399 to 47319412 13 + TSS region transcription start site region 125269
Tssr125270 14 47319441 to 47319454 13 + TSS region transcription start site region 125270
Tssr125271 14 47319457 to 47319490 33 + TSS region transcription start site region 125271
Tssr125272 14 47319495 to 47319539 44 + TSS region transcription start site region 125272
Tssr125273 14 47319580 to 47319595 15 + TSS region transcription start site region 125273
Tssr125274 14 47319669 to 47319730 61 + TSS region transcription start site region 125274
Gm49190 14 47320410 to 47321056 646 - pseudogene predicted gene, 49190
Gm41147 14 47341670 to 47355646 13976 - lncRNA gene predicted gene, 41147