Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:46953895-47389402

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130 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Samd4 14 46882965 to 47105817 222852 + protein coding gene sterile alpha motif domain containing 4
Mir378c 14 46954830 to 46954928 98 - miRNA gene microRNA 378c
Gm15562 14 46961440 to 46965684 4244 + sense intronic lncRNA gene predicted gene 15562
Tssr125247 14 47001336 to 47001343 7 + TSS region transcription start site region 125247
Tssr125248 14 47001354 to 47001377 23 + TSS region transcription start site region 125248
Tssr125249 14 47001379 to 47001393 14 + TSS region transcription start site region 125249
Tssr125250 14 47062870 to 47062874 4 + TSS region transcription start site region 125250
Tssr4383 14 47064996 to 47065003 7 + TSS region transcription start site region 4383
Tssr125251 14 47066417 to 47066439 22 + TSS region transcription start site region 125251
Tssr125252 14 47068938 to 47068948 10 + TSS region transcription start site region 125252
Tssr125253 14 47068962 to 47068983 21 + TSS region transcription start site region 125253
Tssr125254 14 47068993 to 47069032 39 + TSS region transcription start site region 125254
Tssr125255 14 47069040 to 47069049 9 + TSS region transcription start site region 125255
Cpgi6378 14 47073929 to 47074242 313 CpG island CpG island 6378
Cpgi6379 14 47086753 to 47087037 284 CpG island CpG island 6379
Tssr125256 14 47087525 to 47087530 5 + TSS region transcription start site region 125256
Gm10371 14 47097679 to 47116161 18482 - antisense lncRNA gene predicted gene 10371
Tssr4384 14 47097748 to 47097752 4 + TSS region transcription start site region 4384
Hcbip1 14 47097793 to 59725144 12627351 QTL hexachlorobenzene induced porphyria 1
Cia17 14 47097793 to 47097924 131 QTL collagen induced arthritis QTL 17
Ath13 14 47097793 to 47097924 131 QTL atherosclerosis 13
D14Mit60 14 47097793 to 47097924 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 60
Gm49132 14 47116296 to 47120439 4143 + unclassified gene predicted gene, 49132
Gch1 14 47153895 to 47189402 35507 - protein coding gene GTP cyclohydrolase 1
Gm49134 14 47162377 to 47162634 257 + pseudogene predicted gene, 49134
Tssr128303 14 47167747 to 47167766 19 - TSS region transcription start site region 128303
Tssr128304 14 47167793 to 47167811 18 - TSS region transcription start site region 128304
Tssr128305 14 47167822 to 47167835 13 - TSS region transcription start site region 128305
Tssr128306 14 47167890 to 47167909 19 - TSS region transcription start site region 128306
Tssr128307 14 47175648 to 47175664 16 - TSS region transcription start site region 128307
Tssr128308 14 47177304 to 47177337 33 - TSS region transcription start site region 128308
Tssr128309 14 47177838 to 47177861 23 - TSS region transcription start site region 128309
Tssr128310 14 47177875 to 47177886 11 - TSS region transcription start site region 128310
Gm18811 14 47177883 to 47178546 663 - pseudogene predicted gene, 18811
Tssr128311 14 47186953 to 47186957 4 - TSS region transcription start site region 128311
Cpgi6380 14 47188521 to 47189730 1209 CpG island CpG island 6380
Tssr128312 14 47189406 to 47189419 13 - TSS region transcription start site region 128312
Tssr125257 14 47189626 to 47189646 20 + TSS region transcription start site region 125257
Gm49136 14 47199870 to 47200120 250 + pseudogene predicted gene, 49136
Tssr4385 14 47200245 to 47200252 7 + TSS region transcription start site region 4385
Gm49137 14 47214135 to 47214738 603 - pseudogene predicted gene, 49137
Wdhd1 14 47240944 to 47276857 35913 - protein coding gene WD repeat and HMG-box DNA binding protein 1
Gm49149 14 47261832 to 47262186 354 - unclassified gene predicted gene, 49149
Gm24378 14 47270859 to 47270964 105 - snRNA gene predicted gene, 24378
Tssr128313 14 47275349 to 47275354 5 - TSS region transcription start site region 128313
Cpgi6381 14 47276277 to 47277413 1136 CpG island CpG island 6381
Gm49150 14 47276370 to 47276796 426 + antisense lncRNA gene predicted gene, 49150
Tssr128314 14 47276792 to 47276848 56 - TSS region transcription start site region 128314
Tssr128315 14 47276851 to 47276864 13 - TSS region transcription start site region 128315
Tssr125258 14 47276910 to 47276936 26 + TSS region transcription start site region 125258
Tssr125259 14 47276990 to 47277009 19 + TSS region transcription start site region 125259
Tssr125260 14 47277040 to 47277045 5 + TSS region transcription start site region 125260
Tssr4386 14 47277134 to 47277143 9 + TSS region transcription start site region 4386
Socs4 14 47277143 to 47291591 14448 + protein coding gene suppressor of cytokine signaling 4
Tssr128316 14 47277188 to 47277211 23 - TSS region transcription start site region 128316
Tssr125261 14 47287158 to 47287160 2 + TSS region transcription start site region 125261
Tssr125262 14 47291953 to 47291966 13 + TSS region transcription start site region 125262
Tssr125263 14 47292306 to 47292310 4 + TSS region transcription start site region 125263
Gm35078 14 47296399 to 47298405 2006 + protein coding gene predicted gene, 35078
Tssr125264 14 47296509 to 47296545 36 + TSS region transcription start site region 125264
Gm9502 14 47297508 to 47298542 1034 - unclassified gene predicted gene 9502
Cpgi6382 14 47298014 to 47298686 672 CpG island CpG island 6382
Tssr125265 14 47298260 to 47298342 82 + TSS region transcription start site region 125265
Mapk1ip1l 14 47298266 to 47323204 24938 + protein coding gene mitogen-activated protein kinase 1 interacting protein 1-like
Tssr125266 14 47298618 to 47298647 29 + TSS region transcription start site region 125266
Gm49189 14 47301982 to 47305485 3503 - antisense lncRNA gene predicted gene, 49189
Tssr4387 14 47307917 to 47307929 12 + TSS region transcription start site region 4387
Tssr125267 14 47310539 to 47310564 25 + TSS region transcription start site region 125267
Tssr125268 14 47310670 to 47310704 34 + TSS region transcription start site region 125268
5830458C19Rik 14 47316473 to 47317489 1016 unclassified gene RIKEN cDNA 5830458C19 gene
Tssr125269 14 47319399 to 47319412 13 + TSS region transcription start site region 125269
Tssr125270 14 47319441 to 47319454 13 + TSS region transcription start site region 125270
Tssr125271 14 47319457 to 47319490 33 + TSS region transcription start site region 125271
Tssr125272 14 47319495 to 47319539 44 + TSS region transcription start site region 125272
Tssr125273 14 47319580 to 47319595 15 + TSS region transcription start site region 125273
Tssr125274 14 47319669 to 47319730 61 + TSS region transcription start site region 125274
Gm49190 14 47320410 to 47321056 646 - pseudogene predicted gene, 49190
Gm41147 14 47341670 to 47355646 13976 - lncRNA gene predicted gene, 41147
Tssr125275 14 47351674 to 47351680 6 + TSS region transcription start site region 125275
Tssr125276 14 47358207 to 47358221 14 + TSS region transcription start site region 125276
Tssr125277 14 47360781 to 47360794 13 + TSS region transcription start site region 125277
Tssr128317 14 47361521 to 47361566 45 - TSS region transcription start site region 128317
Tssr125278 14 47367768 to 47367796 28 + TSS region transcription start site region 125278
Cpgi6383 14 47373715 to 47374403 688 CpG island CpG island 6383
Lgals3 14 47373860 to 47386167 12307 + protein coding gene lectin, galactose binding, soluble 3
Tssr125279 14 47373905 to 47373923 18 + TSS region transcription start site region 125279
Tssr125280 14 47374176 to 47374189 13 + TSS region transcription start site region 125280
Tssr125281 14 47374296 to 47374323 27 + TSS region transcription start site region 125281
Tssr125282 14 47375338 to 47375375 37 + TSS region transcription start site region 125282
Tssr125283 14 47376292 to 47376304 12 + TSS region transcription start site region 125283
Tssr125284 14 47376347 to 47376358 11 + TSS region transcription start site region 125284
Tssr125285 14 47377983 to 47378020 37 + TSS region transcription start site region 125285
Tssr128318 14 47378068 to 47378093 25 - TSS region transcription start site region 128318
Tssr125286 14 47378127 to 47378143 16 + TSS region transcription start site region 125286
Tssr125287 14 47378360 to 47378375 15 + TSS region transcription start site region 125287
Tssr125288 14 47378386 to 47378397 11 + TSS region transcription start site region 125288
Tssr128319 14 47378736 to 47378758 22 - TSS region transcription start site region 128319
Tssr125289 14 47380049 to 47380056 7 + TSS region transcription start site region 125289
Tssr125290 14 47380061 to 47380071 10 + TSS region transcription start site region 125290
Tssr125291 14 47380130 to 47380141 11 + TSS region transcription start site region 125291
Tssr125292 14 47380156 to 47380182 26 + TSS region transcription start site region 125292
Tssr125293 14 47380183 to 47380194 11 + TSS region transcription start site region 125293
Tssr125294 14 47380210 to 47380266 56 + TSS region transcription start site region 125294
Tssr128320 14 47380246 to 47380265 19 - TSS region transcription start site region 128320
Tssr128321 14 47380271 to 47380332 61 - TSS region transcription start site region 128321
Tssr125295 14 47380275 to 47380306 31 + TSS region transcription start site region 125295
Tssr125296 14 47380314 to 47380331 17 + TSS region transcription start site region 125296
Tssr125297 14 47380346 to 47380360 14 + TSS region transcription start site region 125297
Tssr125298 14 47380367 to 47380381 14 + TSS region transcription start site region 125298
Tssr4388 14 47380386 to 47380398 12 + TSS region transcription start site region 4388
Tssr128322 14 47380407 to 47380423 16 - TSS region transcription start site region 128322
Tssr125299 14 47380535 to 47380558 23 + TSS region transcription start site region 125299
Tssr125300 14 47381582 to 47381609 27 + TSS region transcription start site region 125300
Tssr128323 14 47381619 to 47381642 23 - TSS region transcription start site region 128323
Tssr125301 14 47381622 to 47381635 13 + TSS region transcription start site region 125301
Tssr128324 14 47381660 to 47381692 32 - TSS region transcription start site region 128324
Tssr125302 14 47384591 to 47384613 22 + TSS region transcription start site region 125302
Tssr125303 14 47384620 to 47384642 22 + TSS region transcription start site region 125303
Tssr128325 14 47384623 to 47384655 32 - TSS region transcription start site region 128325
Tssr125304 14 47384672 to 47384690 18 + TSS region transcription start site region 125304
Tssr128326 14 47384689 to 47384728 39 - TSS region transcription start site region 128326
Tssr4389 14 47384699 to 47384708 9 + TSS region transcription start site region 4389
Tssr125305 14 47384716 to 47384727 11 + TSS region transcription start site region 125305
Tssr125306 14 47385518 to 47385594 76 + TSS region transcription start site region 125306
Tssr128327 14 47385578 to 47385653 75 - TSS region transcription start site region 128327
Tssr125307 14 47385599 to 47385665 66 + TSS region transcription start site region 125307
Tssr128328 14 47385682 to 47385702 20 - TSS region transcription start site region 128328
Tssr125308 14 47385725 to 47385732 7 + TSS region transcription start site region 125308
Tssr128329 14 47385793 to 47385798 5 - TSS region transcription start site region 128329
Dlgap5 14 47387779 to 47418407 30628 - protein coding gene DLG associated protein 5