Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:45539689-46208170

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41144 14 45541173 to 45543567 2394 - lincRNA gene predicted gene, 41144
Tssr125222 14 45543675 to 45543692 17 + TSS region transcription start site region 125222
4930527F14Rik 14 45543710 to 45562877 19167 + bidirectional promoter lncRNA gene RIKEN cDNA 4930527F14 gene
Gm49123 14 45551838 to 45554402 2564 - lincRNA gene predicted gene, 49123
Gm5206 14 45557443 to 45558271 828 - pseudogene predicted pseudogene 5206
Gm15601 14 45563834 to 45598512 34678 + antisense lncRNA gene predicted gene 15601
Gm49124 14 45565531 to 45586120 20589 + lincRNA gene predicted gene, 49124
Cpgi6364 14 45566334 to 45566733 399 CpG island CpG island 6364
Tssr125223 14 45573536 to 45573538 2 + TSS region transcription start site region 125223
Gm41145 14 45573816 to 45582167 8351 - lncRNA gene predicted gene, 41145
Tssr128265 14 45582032 to 45582040 8 - TSS region transcription start site region 128265
Ddhd1 14 45593171 to 45658143 64972 - protein coding gene DDHD domain containing 1
Tssr128266 14 45595142 to 45595172 30 - TSS region transcription start site region 128266
Tssr128267 14 45598640 to 45598676 36 - TSS region transcription start site region 128267
Tssr128268 14 45610561 to 45610582 21 - TSS region transcription start site region 128268
Tssr128269 14 45610587 to 45610603 16 - TSS region transcription start site region 128269
Gm49125 14 45612772 to 45614066 1294 - unclassified gene predicted gene, 49125
Tssr128270 14 45648281 to 45648284 3 - TSS region transcription start site region 128270
Cpgi6365 14 45656713 to 45658670 1957 CpG island CpG island 6365
Mir5131 14 45657961 to 45658053 92 - miRNA gene microRNA 5131
Tssr128271 14 45657970 to 45658016 46 - TSS region transcription start site region 128271
Tssr128272 14 45658034 to 45658050 16 - TSS region transcription start site region 128272
Tssr128273 14 45658058 to 45658085 27 - TSS region transcription start site region 128273
Tssr128274 14 45658094 to 45658128 34 - TSS region transcription start site region 128274
Tssr128275 14 45658145 to 45658183 38 - TSS region transcription start site region 128275
A530076I17Rik 14 45660770 to 45668498 7728 - lincRNA gene RIKEN cDNA A530076I17 gene
Gm34360 14 45661477 to 45665793 4316 - lncRNA gene predicted gene, 34360
Tssr128276 14 45664418 to 45664425 7 - TSS region transcription start site region 128276
Gm15516 14 45713132 to 45713324 192 - pseudogene predicted gene 15516
Gm7206 14 45713347 to 45713826 479 + pseudogene predicted pseudogene 7206
Gm15218 14 45754689 to 45993170 238481 + lincRNA gene predicted gene 15218
Cpgi6366 14 45761012 to 45761263 251 CpG island CpG island 6366
Gm8317 14 45858076 to 45858546 470 - pseudogene predicted gene 8317
Gm15220 14 45919087 to 45919465 378 - pseudogene predicted gene 15220
Gm46475 14 45925934 to 45926197 263 + pseudogene predicted gene, 46475
Gm49192 14 45944000 to 45991037 47037 - lincRNA gene predicted gene, 49192
Gm6580 14 46027428 to 46028784 1356 + pseudogene predicted gene 6580
Gm37257 14 46044460 to 46061149 16689 - unclassified gene predicted gene, 37257
Tssr125224 14 46084024 to 46084026 2 + TSS region transcription start site region 125224
Gm1821 14 46084027 to 46084957 930 + pseudogene predicted gene 1821
Tssr125225 14 46173197 to 46173201 4 + TSS region transcription start site region 125225
D14Mit134 14 46196535 to 46196653 118 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 134