Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:44811523-45612432

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130 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49145 14 44821886 to 44834142 12256 + lincRNA gene predicted gene, 49145
Gm34198 14 44846050 to 44846350 300 + lncRNA gene predicted gene, 34198
Ptgdr 14 44851235 to 44859375 8140 - protein coding gene prostaglandin D receptor
Cpgi6356 14 44858755 to 44859338 583 CpG island CpG island 6356
Gm16976 14 44858954 to 44974953 115999 + unclassified non-coding RNA gene predicted gene, 16976
Tssr128219 14 44859348 to 44859364 16 - TSS region transcription start site region 128219
Tssr128220 14 44859370 to 44859381 11 - TSS region transcription start site region 128220
Gm18524 14 44905748 to 44906516 768 + pseudogene predicted gene, 18524
Tssr125198 14 44926818 to 44926824 6 + TSS region transcription start site region 125198
Gm49148 14 44933163 to 44934206 1043 + pseudogene predicted gene, 49148
Gm49147 14 44939102 to 44939266 164 - pseudogene predicted gene, 49147
Gm41142 14 44944488 to 44957540 13052 + lncRNA gene predicted gene, 41142
Mir327 14 44947443 to 44947511 68 - miRNA gene microRNA 327
4930431P03Rik 14 44955215 to 44961326 6111 - lncRNA gene RIKEN cDNA 4930431P03 gene
Gm49364 14 44955217 to 44989699 34482 - unclassified non-coding RNA gene predicted gene, 49364
Gm17173 14 44972268 to 45006900 34632 - antisense lncRNA gene predicted gene 17173
Tssr125199 14 44988164 to 44988178 14 + TSS region transcription start site region 125199
Tssr125200 14 44988192 to 44988203 11 + TSS region transcription start site region 125200
Ptger2 14 44988195 to 45003820 15625 + protein coding gene prostaglandin E receptor 2 (subtype EP2)
Tssr125201 14 44988456 to 44988472 16 + TSS region transcription start site region 125201
Tssr125202 14 44988576 to 44988611 35 + TSS region transcription start site region 125202
Tssr125203 14 44988653 to 44988672 19 + TSS region transcription start site region 125203
Cpgi6357 14 44988725 to 44989852 1127 CpG island CpG island 6357
Tssr4380 14 44988768 to 44988812 44 - TSS region transcription start site region 4380
Tssr125204 14 44988896 to 44988919 23 + TSS region transcription start site region 125204
Tssr128221 14 44989673 to 44989679 6 - TSS region transcription start site region 128221
Tssr128222 14 44989850 to 44989870 20 - TSS region transcription start site region 128222
Tssr128223 14 44989902 to 44989926 24 - TSS region transcription start site region 128223
Tssr125205 14 44997170 to 44997191 21 + TSS region transcription start site region 125205
Tssr125206 14 45038177 to 45038179 2 + TSS region transcription start site region 125206
Tssr128224 14 45041198 to 45041222 24 - TSS region transcription start site region 128224
Gm49180 14 45056497 to 45102094 45597 - lincRNA gene predicted gene, 49180
Gm21010 14 45090615 to 45091900 1285 + pseudogene predicted gene, 21010
Tssr128225 14 45102327 to 45102356 29 - TSS region transcription start site region 128225
Gm49181 14 45113704 to 45114112 408 - pseudogene predicted gene, 49181
Gm49183 14 45114401 to 45114708 307 - pseudogene predicted gene, 49183
Gm49184 14 45130034 to 45130384 350 + pseudogene predicted gene, 49184
Txndc16 14 45134448 to 45219538 85090 - protein coding gene thioredoxin domain containing 16
Tssr125207 14 45155739 to 45155746 7 + TSS region transcription start site region 125207
Tssr125208 14 45155818 to 45155843 25 + TSS region transcription start site region 125208
Tssr128226 14 45158447 to 45158450 3 - TSS region transcription start site region 128226
Tssr128227 14 45173583 to 45173612 29 - TSS region transcription start site region 128227
Gm34362 14 45175038 to 45176705 1667 - protein coding gene predicted gene, 34362
Gm15765 14 45211523 to 45212432 909 + pseudogene predicted gene 15765
Tssr128228 14 45218983 to 45218997 14 - TSS region transcription start site region 128228
Cpgi6358 14 45218993 to 45220991 1998 CpG island CpG island 6358
Tssr128229 14 45219246 to 45219257 11 - TSS region transcription start site region 128229
Tssr128230 14 45219273 to 45219308 35 - TSS region transcription start site region 128230
Tssr128231 14 45219334 to 45219345 11 - TSS region transcription start site region 128231
Tssr128232 14 45219364 to 45219428 64 - TSS region transcription start site region 128232
Tssr128233 14 45219435 to 45219446 11 - TSS region transcription start site region 128233
Tssr125209 14 45219711 to 45219725 14 + TSS region transcription start site region 125209
Gpr137c 14 45219717 to 45282725 63008 + protein coding gene G protein-coupled receptor 137C
Tssr125210 14 45219744 to 45219775 31 + TSS region transcription start site region 125210
Tssr128234 14 45220741 to 45220761 20 - TSS region transcription start site region 128234
Tssr128235 14 45270197 to 45270205 8 - TSS region transcription start site region 128235
Gm49194 14 45273250 to 45274723 1473 + sense intronic lncRNA gene predicted gene, 49194
Tssr125211 14 45276052 to 45276069 17 + TSS region transcription start site region 125211
Tssr4381 14 45276081 to 45276086 5 + TSS region transcription start site region 4381
Ero1l 14 45283087 to 45318572 35485 - protein coding gene ERO1-like (S. cerevisiae)
Tssr128236 14 45285353 to 45285366 13 - TSS region transcription start site region 128236
Tssr128237 14 45285929 to 45285971 42 - TSS region transcription start site region 128237
Tssr128238 14 45285972 to 45285994 22 - TSS region transcription start site region 128238
Tssr128239 14 45287845 to 45287863 18 - TSS region transcription start site region 128239
Tssr128240 14 45295864 to 45295875 11 - TSS region transcription start site region 128240
Tssr128241 14 45295879 to 45295915 36 - TSS region transcription start site region 128241
Tssr128242 14 45295963 to 45295976 13 - TSS region transcription start site region 128242
Tssr125212 14 45299879 to 45299927 48 + TSS region transcription start site region 125212
Tssr128243 14 45299956 to 45299969 13 - TSS region transcription start site region 128243
Tssr128244 14 45306211 to 45306216 5 - TSS region transcription start site region 128244
Tssr128245 14 45313356 to 45313393 37 - TSS region transcription start site region 128245
Tssr128246 14 45314789 to 45314795 6 - TSS region transcription start site region 128246
Cpgi6359 14 45317935 to 45319050 1115 CpG island CpG island 6359
Tssr128247 14 45318509 to 45318520 11 - TSS region transcription start site region 128247
Tssr128248 14 45318530 to 45318546 16 - TSS region transcription start site region 128248
Tssr128249 14 45318556 to 45318579 23 - TSS region transcription start site region 128249
Tssr128250 14 45318727 to 45318770 43 - TSS region transcription start site region 128250
Cpgi6360 14 45329565 to 45330390 825 CpG island CpG island 6360
Tssr125213 14 45329800 to 45329811 11 + TSS region transcription start site region 125213
Tssr125214 14 45329815 to 45329849 34 + TSS region transcription start site region 125214
Psmc6 14 45329824 to 45349071 19247 + protein coding gene proteasome (prosome, macropain) 26S subunit, ATPase, 6
Tssr125215 14 45337513 to 45337531 18 + TSS region transcription start site region 125215
Tssr125216 14 45341275 to 45341310 35 + TSS region transcription start site region 125216
Cpgi6361 14 45350918 to 45351861 943 CpG island CpG island 6361
Tssr125217 14 45351052 to 45351084 32 + TSS region transcription start site region 125217
Tssr125218 14 45351177 to 45351209 32 + TSS region transcription start site region 125218
Styx 14 45351186 to 45376884 25698 + protein coding gene serine/threonine/tyrosine interaction protein
Tssr125219 14 45358761 to 45358765 4 + TSS region transcription start site region 125219
Gnpnat1 14 45376421 to 45388956 12535 - protein coding gene glucosamine-phosphate N-acetyltransferase 1
Cpgi6362 14 45388449 to 45389374 925 CpG island CpG island 6362
Tssr128251 14 45388747 to 45388758 11 - TSS region transcription start site region 128251
Tssr128252 14 45388772 to 45388836 64 - TSS region transcription start site region 128252
Tssr125220 14 45389028 to 45389076 48 + TSS region transcription start site region 125220
Tssr125221 14 45391679 to 45391687 8 + TSS region transcription start site region 125221
Gm41143 14 45391733 to 45422370 30637 + lncRNA gene predicted gene, 41143
Gm25353 14 45404840 to 45404960 120 - miRNA gene predicted gene, 25353
Tssr128253 14 45442476 to 45442496 20 - TSS region transcription start site region 128253
Gm34250 14 45442754 to 45447073 4319 - lincRNA gene predicted gene, 34250
Tssr128254 14 45444966 to 45444968 2 - TSS region transcription start site region 128254
Fermt2 14 45458792 to 45530113 71321 - protein coding gene fermitin family member 2
Gm22637 14 45461363 to 45461645 282 - unclassified non-coding RNA gene predicted gene, 22637
Tssr128255 14 45477852 to 45477855 3 - TSS region transcription start site region 128255
Tssr128256 14 45477856 to 45477870 14 - TSS region transcription start site region 128256
Tssr128257 14 45477872 to 45477883 11 - TSS region transcription start site region 128257
9630050E16Rik 14 45484645 to 45492085 7440 - unclassified gene RIKEN cDNA 9630050E16 gene
Cpgi6363 14 45529184 to 45530804 1620 CpG island CpG island 6363
Tssr128258 14 45529550 to 45529621 71 - TSS region transcription start site region 128258
Tssr128259 14 45529775 to 45529841 66 - TSS region transcription start site region 128259
Tssr128260 14 45529990 to 45530019 29 - TSS region transcription start site region 128260
Tssr128261 14 45530020 to 45530056 36 - TSS region transcription start site region 128261
Tssr128262 14 45530130 to 45530182 52 - TSS region transcription start site region 128262
Tssr128263 14 45530188 to 45530219 31 - TSS region transcription start site region 128263
Tssr128264 14 45530251 to 45530282 31 - TSS region transcription start site region 128264
Gm46452 14 45530470 to 45538946 8476 + lncRNA gene predicted gene, 46452
Gm41144 14 45541173 to 45543567 2394 - lincRNA gene predicted gene, 41144
Tssr125222 14 45543675 to 45543692 17 + TSS region transcription start site region 125222
4930527F14Rik 14 45543710 to 45562877 19167 + bidirectional promoter lncRNA gene RIKEN cDNA 4930527F14 gene
Gm49123 14 45551838 to 45554402 2564 - lincRNA gene predicted gene, 49123
Gm5206 14 45557443 to 45558271 828 - pseudogene predicted pseudogene 5206
Gm15601 14 45563834 to 45598512 34678 + antisense lncRNA gene predicted gene 15601
Gm49124 14 45565531 to 45586120 20589 + lincRNA gene predicted gene, 49124
Cpgi6364 14 45566334 to 45566733 399 CpG island CpG island 6364
Tssr125223 14 45573536 to 45573538 2 + TSS region transcription start site region 125223
Gm41145 14 45573816 to 45582167 8351 - lncRNA gene predicted gene, 41145
Tssr128265 14 45582032 to 45582040 8 - TSS region transcription start site region 128265
Ddhd1 14 45593171 to 45658143 64972 - protein coding gene DDHD domain containing 1
Tssr128266 14 45595142 to 45595172 30 - TSS region transcription start site region 128266
Tssr128267 14 45598640 to 45598676 36 - TSS region transcription start site region 128267
Tssr128268 14 45610561 to 45610582 21 - TSS region transcription start site region 128268
Tssr128269 14 45610587 to 45610603 16 - TSS region transcription start site region 128269