Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:44808192-45168203

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49145 14 44821886 to 44834142 12256 + lincRNA gene predicted gene, 49145
Gm34198 14 44846050 to 44846350 300 + lncRNA gene predicted gene, 34198
Ptgdr 14 44851235 to 44859375 8140 - protein coding gene prostaglandin D receptor
Cpgi6356 14 44858755 to 44859338 583 CpG island CpG island 6356
Gm16976 14 44858954 to 44974953 115999 + unclassified non-coding RNA gene predicted gene, 16976
Tssr128219 14 44859348 to 44859364 16 - TSS region transcription start site region 128219
Tssr128220 14 44859370 to 44859381 11 - TSS region transcription start site region 128220
Gm18524 14 44905748 to 44906516 768 + pseudogene predicted gene, 18524
Tssr125198 14 44926818 to 44926824 6 + TSS region transcription start site region 125198
Gm49148 14 44933163 to 44934206 1043 + pseudogene predicted gene, 49148
Gm49147 14 44939102 to 44939266 164 - pseudogene predicted gene, 49147
Gm41142 14 44944488 to 44957540 13052 + lncRNA gene predicted gene, 41142
Mir327 14 44947443 to 44947511 68 - miRNA gene microRNA 327
4930431P03Rik 14 44955215 to 44961326 6111 - lncRNA gene RIKEN cDNA 4930431P03 gene
Gm49364 14 44955217 to 44989699 34482 - unclassified non-coding RNA gene predicted gene, 49364
Gm17173 14 44972268 to 45006900 34632 - antisense lncRNA gene predicted gene 17173
Tssr125199 14 44988164 to 44988178 14 + TSS region transcription start site region 125199
Tssr125200 14 44988192 to 44988203 11 + TSS region transcription start site region 125200
Ptger2 14 44988195 to 45003820 15625 + protein coding gene prostaglandin E receptor 2 (subtype EP2)
Tssr125201 14 44988456 to 44988472 16 + TSS region transcription start site region 125201
Tssr125202 14 44988576 to 44988611 35 + TSS region transcription start site region 125202
Tssr125203 14 44988653 to 44988672 19 + TSS region transcription start site region 125203
Cpgi6357 14 44988725 to 44989852 1127 CpG island CpG island 6357
Tssr4380 14 44988768 to 44988812 44 - TSS region transcription start site region 4380
Tssr125204 14 44988896 to 44988919 23 + TSS region transcription start site region 125204
Tssr128221 14 44989673 to 44989679 6 - TSS region transcription start site region 128221
Tssr128222 14 44989850 to 44989870 20 - TSS region transcription start site region 128222
Tssr128223 14 44989902 to 44989926 24 - TSS region transcription start site region 128223
Tssr125205 14 44997170 to 44997191 21 + TSS region transcription start site region 125205
Tssr125206 14 45038177 to 45038179 2 + TSS region transcription start site region 125206
Tssr128224 14 45041198 to 45041222 24 - TSS region transcription start site region 128224
Gm49180 14 45056497 to 45102094 45597 - lincRNA gene predicted gene, 49180
Gm21010 14 45090615 to 45091900 1285 + pseudogene predicted gene, 21010
Tssr128225 14 45102327 to 45102356 29 - TSS region transcription start site region 128225
Gm49181 14 45113704 to 45114112 408 - pseudogene predicted gene, 49181
Gm49183 14 45114401 to 45114708 307 - pseudogene predicted gene, 49183
Gm49184 14 45130034 to 45130384 350 + pseudogene predicted gene, 49184
Txndc16 14 45134448 to 45219538 85090 - protein coding gene thioredoxin domain containing 16
Tssr125207 14 45155739 to 45155746 7 + TSS region transcription start site region 125207
Tssr125208 14 45155818 to 45155843 25 + TSS region transcription start site region 125208
Tssr128226 14 45158447 to 45158450 3 - TSS region transcription start site region 128226