Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:44444701-45165484

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49779 14 44440402 to 44452387 11985 - lincRNA gene predicted gene, 49779
Gm21991 14 44447792 to 44450009 2217 + pseudogene predicted gene 21991
Gm17184 14 44472516 to 44535359 62843 - pseudogene predicted gene 17184
BC061237 14 44500122 to 44506345 6223 + protein coding gene cDNA sequence BC061237
Tssr4379 14 44500160 to 44500174 14 + TSS region transcription start site region 4379
Gm17093 14 44518276 to 44523444 5168 + protein coding gene predicted gene 17093
Gm17183 14 44530797 to 44533002 2205 + pseudogene predicted gene 17183
Gm5624 14 44556795 to 44627938 71143 - protein coding gene predicted gene 5624
Gm8247 14 44583282 to 44585558 2276 + protein coding gene predicted gene 8247
Gm16439 14 44596665 to 44597228 563 + pseudogene predicted pseudogene 16439
Gm8256 14 44613568 to 44618896 5328 + pseudogene predicted gene 8256
Gm9593 14 44623288 to 44625490 2202 + pseudogene predicted gene 9593
Gm8257 14 44649532 to 44657357 7825 - protein coding gene predicted pseudogene 8257
Gm21754 14 44687491 to 44689874 2383 + pseudogene predicted gene, 21754
Gm6541 14 44701858 to 44704087 2229 + pseudogene predicted gene 6541
Gm8267 14 44717167 to 44724987 7820 - protein coding gene predicted gene 8267
Gm34060 14 44750397 to 44765684 15287 + lincRNA gene predicted gene, 34060
Gm49142 14 44753446 to 44753631 185 + pseudogene predicted gene, 49142
Gm41141 14 44758109 to 44761831 3722 - lncRNA gene predicted gene, 41141
Tssr128217 14 44772461 to 44772466 5 - TSS region transcription start site region 128217
Gm17187 14 44777463 to 44779762 2299 + pseudogene predicted gene 17187
Gm49143 14 44782571 to 44783601 1030 - pseudogene predicted gene, 49143
Tssr128218 14 44789935 to 44789940 5 - TSS region transcription start site region 128218
Gm17070 14 44804701 to 44805484 783 - pseudogene predicted gene 17070
Gm49145 14 44821886 to 44834142 12256 + lincRNA gene predicted gene, 49145
Gm34198 14 44846050 to 44846350 300 + lncRNA gene predicted gene, 34198
Ptgdr 14 44851235 to 44859375 8140 - protein coding gene prostaglandin D receptor
Cpgi6356 14 44858755 to 44859338 583 CpG island CpG island 6356
Gm16976 14 44858954 to 44974953 115999 + unclassified non-coding RNA gene predicted gene, 16976
Tssr128219 14 44859348 to 44859364 16 - TSS region transcription start site region 128219
Tssr128220 14 44859370 to 44859381 11 - TSS region transcription start site region 128220
Gm18524 14 44905748 to 44906516 768 + pseudogene predicted gene, 18524
Tssr125198 14 44926818 to 44926824 6 + TSS region transcription start site region 125198
Gm49148 14 44933163 to 44934206 1043 + pseudogene predicted gene, 49148
Gm49147 14 44939102 to 44939266 164 - pseudogene predicted gene, 49147
Gm41142 14 44944488 to 44957540 13052 + lncRNA gene predicted gene, 41142
Mir327 14 44947443 to 44947511 68 - miRNA gene microRNA 327
4930431P03Rik 14 44955215 to 44961326 6111 - lncRNA gene RIKEN cDNA 4930431P03 gene
Gm49364 14 44955217 to 44989699 34482 - unclassified non-coding RNA gene predicted gene, 49364
Gm17173 14 44972268 to 45006900 34632 - antisense lncRNA gene predicted gene 17173
Tssr125199 14 44988164 to 44988178 14 + TSS region transcription start site region 125199
Tssr125200 14 44988192 to 44988203 11 + TSS region transcription start site region 125200
Ptger2 14 44988195 to 45003820 15625 + protein coding gene prostaglandin E receptor 2 (subtype EP2)
Tssr125201 14 44988456 to 44988472 16 + TSS region transcription start site region 125201
Tssr125202 14 44988576 to 44988611 35 + TSS region transcription start site region 125202
Tssr125203 14 44988653 to 44988672 19 + TSS region transcription start site region 125203
Cpgi6357 14 44988725 to 44989852 1127 CpG island CpG island 6357
Tssr4380 14 44988768 to 44988812 44 - TSS region transcription start site region 4380
Tssr125204 14 44988896 to 44988919 23 + TSS region transcription start site region 125204
Tssr128221 14 44989673 to 44989679 6 - TSS region transcription start site region 128221
Tssr128222 14 44989850 to 44989870 20 - TSS region transcription start site region 128222
Tssr128223 14 44989902 to 44989926 24 - TSS region transcription start site region 128223
Tssr125205 14 44997170 to 44997191 21 + TSS region transcription start site region 125205
Tssr125206 14 45038177 to 45038179 2 + TSS region transcription start site region 125206
Tssr128224 14 45041198 to 45041222 24 - TSS region transcription start site region 128224
Gm49180 14 45056497 to 45102094 45597 - lincRNA gene predicted gene, 49180
Gm21010 14 45090615 to 45091900 1285 + pseudogene predicted gene, 21010
Tssr128225 14 45102327 to 45102356 29 - TSS region transcription start site region 128225
Gm49181 14 45113704 to 45114112 408 - pseudogene predicted gene, 49181
Gm49183 14 45114401 to 45114708 307 - pseudogene predicted gene, 49183
Gm49184 14 45130034 to 45130384 350 + pseudogene predicted gene, 49184
Txndc16 14 45134448 to 45219538 85090 - protein coding gene thioredoxin domain containing 16
Tssr125207 14 45155739 to 45155746 7 + TSS region transcription start site region 125207
Tssr125208 14 45155818 to 45155843 25 + TSS region transcription start site region 125208
Tssr128226 14 45158447 to 45158450 3 - TSS region transcription start site region 128226