Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:44136665-45057228

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8207 14 44138385 to 44140545 2160 + pseudogene predicted gene 8207
4930503E14Rik 14 44163061 to 44172602 9541 - protein coding gene RIKEN cDNA 4930503E14 gene
1700047E10Rik 14 44191607 to 44213237 21630 - antisense lncRNA gene RIKEN cDNA 1700047E10 gene
Gm8212 14 44197506 to 44201566 4060 + protein coding gene predicted gene 8212
Gm49104 14 44210608 to 44210861 253 + pseudogene predicted gene, 49104
Gm32857 14 44226217 to 44315511 89294 - lincRNA gene predicted gene, 32857
Gm49110 14 44230931 to 44231161 230 - pseudogene predicted gene, 49110
Cpgi6355 14 44248063 to 44248217 154 CpG island CpG island 6355
Tssr4378 14 44256188 to 44256191 3 + TSS region transcription start site region 4378
Gm6532 14 44265044 to 44265602 558 + pseudogene predicted pseudogene 6532
Gm49111 14 44275579 to 44275796 217 - pseudogene predicted gene, 49111
Gm8220 14 44285590 to 44291058 5468 + protein coding gene predicted gene 8220
Gm49109 14 44306134 to 44306443 309 - pseudogene predicted gene, 49109
Gm8224 14 44307689 to 44309906 2217 + pseudogene predicted gene 8224
Gm5930 14 44330442 to 44338584 8142 - protein coding gene predicted gene 5930
Gm8229 14 44365357 to 44370841 5484 + protein coding gene predicted gene 8229
Gm3370 14 44379870 to 44382093 2223 + pseudogene predicted gene 3370
Gm3371 14 44402671 to 44410688 8017 - protein coding gene predicted gene 3371
Gm8232 14 44433563 to 44438946 5383 + protein coding gene predicted gene 8232
Gm49779 14 44440402 to 44452387 11985 - lincRNA gene predicted gene, 49779
Gm21991 14 44447792 to 44450009 2217 + pseudogene predicted gene 21991
Gm17184 14 44472516 to 44535359 62843 - pseudogene predicted gene 17184
BC061237 14 44500122 to 44506345 6223 + protein coding gene cDNA sequence BC061237
Tssr4379 14 44500160 to 44500174 14 + TSS region transcription start site region 4379
Gm17093 14 44518276 to 44523444 5168 + protein coding gene predicted gene 17093
Gm17183 14 44530797 to 44533002 2205 + pseudogene predicted gene 17183
Gm5624 14 44556795 to 44627938 71143 - protein coding gene predicted gene 5624
Gm8247 14 44583282 to 44585558 2276 + protein coding gene predicted gene 8247
Gm16439 14 44596665 to 44597228 563 + pseudogene predicted pseudogene 16439
Gm8256 14 44613568 to 44618896 5328 + pseudogene predicted gene 8256
Gm9593 14 44623288 to 44625490 2202 + pseudogene predicted gene 9593
Gm8257 14 44649532 to 44657357 7825 - protein coding gene predicted pseudogene 8257
Gm21754 14 44687491 to 44689874 2383 + pseudogene predicted gene, 21754
Gm6541 14 44701858 to 44704087 2229 + pseudogene predicted gene 6541
Gm8267 14 44717167 to 44724987 7820 - protein coding gene predicted gene 8267
Gm34060 14 44750397 to 44765684 15287 + lincRNA gene predicted gene, 34060
Gm49142 14 44753446 to 44753631 185 + pseudogene predicted gene, 49142
Gm41141 14 44758109 to 44761831 3722 - lncRNA gene predicted gene, 41141
Tssr128217 14 44772461 to 44772466 5 - TSS region transcription start site region 128217
Gm17187 14 44777463 to 44779762 2299 + pseudogene predicted gene 17187
Gm49143 14 44782571 to 44783601 1030 - pseudogene predicted gene, 49143
Tssr128218 14 44789935 to 44789940 5 - TSS region transcription start site region 128218
Gm17070 14 44804701 to 44805484 783 - pseudogene predicted gene 17070
Gm49145 14 44821886 to 44834142 12256 + lincRNA gene predicted gene, 49145
Gm34198 14 44846050 to 44846350 300 + lncRNA gene predicted gene, 34198
Ptgdr 14 44851235 to 44859375 8140 - protein coding gene prostaglandin D receptor
Cpgi6356 14 44858755 to 44859338 583 CpG island CpG island 6356
Gm16976 14 44858954 to 44974953 115999 + unclassified non-coding RNA gene predicted gene, 16976
Tssr128219 14 44859348 to 44859364 16 - TSS region transcription start site region 128219
Tssr128220 14 44859370 to 44859381 11 - TSS region transcription start site region 128220
Gm18524 14 44905748 to 44906516 768 + pseudogene predicted gene, 18524
Tssr125198 14 44926818 to 44926824 6 + TSS region transcription start site region 125198
Gm49148 14 44933163 to 44934206 1043 + pseudogene predicted gene, 49148
Gm49147 14 44939102 to 44939266 164 - pseudogene predicted gene, 49147
Gm41142 14 44944488 to 44957540 13052 + lncRNA gene predicted gene, 41142
Mir327 14 44947443 to 44947511 68 - miRNA gene microRNA 327
4930431P03Rik 14 44955215 to 44961326 6111 - lncRNA gene RIKEN cDNA 4930431P03 gene
Gm49364 14 44955217 to 44989699 34482 - unclassified non-coding RNA gene predicted gene, 49364
Gm17173 14 44972268 to 45006900 34632 - antisense lncRNA gene predicted gene 17173
Tssr125199 14 44988164 to 44988178 14 + TSS region transcription start site region 125199
Tssr125200 14 44988192 to 44988203 11 + TSS region transcription start site region 125200
Ptger2 14 44988195 to 45003820 15625 + protein coding gene prostaglandin E receptor 2 (subtype EP2)
Tssr125201 14 44988456 to 44988472 16 + TSS region transcription start site region 125201
Tssr125202 14 44988576 to 44988611 35 + TSS region transcription start site region 125202
Tssr125203 14 44988653 to 44988672 19 + TSS region transcription start site region 125203
Cpgi6357 14 44988725 to 44989852 1127 CpG island CpG island 6357
Tssr4380 14 44988768 to 44988812 44 - TSS region transcription start site region 4380
Tssr125204 14 44988896 to 44988919 23 + TSS region transcription start site region 125204
Tssr128221 14 44989673 to 44989679 6 - TSS region transcription start site region 128221
Tssr128222 14 44989850 to 44989870 20 - TSS region transcription start site region 128222
Tssr128223 14 44989902 to 44989926 24 - TSS region transcription start site region 128223
Tssr125205 14 44997170 to 44997191 21 + TSS region transcription start site region 125205
Tssr125206 14 45038177 to 45038179 2 + TSS region transcription start site region 125206
Tssr128224 14 45041198 to 45041222 24 - TSS region transcription start site region 128224
Gm49180 14 45056497 to 45102094 45597 - lincRNA gene predicted gene, 49180