Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:41121816-41754018

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mat1a 14 41105035 to 41124412 19377 + protein coding gene methionine adenosyltransferase I, alpha
Tssr125161 14 41122500 to 41122511 11 + TSS region transcription start site region 125161
Tssr128210 14 41122529 to 41122556 27 - TSS region transcription start site region 128210
Tssr125162 14 41122539 to 41122549 10 + TSS region transcription start site region 125162
Tssr125163 14 41122556 to 41122573 17 + TSS region transcription start site region 125163
Tssr125164 14 41122574 to 41122586 12 + TSS region transcription start site region 125164
Tssr125165 14 41122705 to 41122739 34 + TSS region transcription start site region 125165
Tssr125166 14 41122788 to 41122797 9 + TSS region transcription start site region 125166
Tssr125167 14 41122816 to 41122828 12 + TSS region transcription start site region 125167
Tssr125168 14 41122892 to 41122915 23 + TSS region transcription start site region 125168
Tssr125169 14 41123545 to 41123562 17 + TSS region transcription start site region 125169
Tssr125170 14 41131777 to 41131794 17 + TSS region transcription start site region 125170
Sftpa1 14 41131788 to 41136373 4585 + protein coding gene surfactant associated protein A1
Tssr125171 14 41132296 to 41132304 8 + TSS region transcription start site region 125171
Tssr125172 14 41134100 to 41134111 11 + TSS region transcription start site region 125172
Tssr125173 14 41134304 to 41134315 11 + TSS region transcription start site region 125173
Tssr128211 14 41134397 to 41134412 15 - TSS region transcription start site region 128211
Tssr125174 14 41134406 to 41134413 7 + TSS region transcription start site region 125174
Tssr125175 14 41134636 to 41134652 16 + TSS region transcription start site region 125175
Tssr125176 14 41136345 to 41136355 10 + TSS region transcription start site region 125176
Tssr125177 14 41136410 to 41136424 14 + TSS region transcription start site region 125177
Tssr125178 14 41136431 to 41136442 11 + TSS region transcription start site region 125178
Tssr125179 14 41136590 to 41136607 17 + TSS region transcription start site region 125179
Tssr125180 14 41136633 to 41136646 13 + TSS region transcription start site region 125180
Tssr125181 14 41136675 to 41136690 15 + TSS region transcription start site region 125181
Tssr125182 14 41137344 to 41137353 9 + TSS region transcription start site region 125182
Tssr125183 14 41137391 to 41137403 12 + TSS region transcription start site region 125183
Tssr125184 14 41137441 to 41137452 11 + TSS region transcription start site region 125184
Tssr125185 14 41137608 to 41137633 25 + TSS region transcription start site region 125185
Tssr125186 14 41137739 to 41137747 8 + TSS region transcription start site region 125186
Tssr125187 14 41137807 to 41137823 16 + TSS region transcription start site region 125187
Tssr125188 14 41137836 to 41137851 15 + TSS region transcription start site region 125188
Tssr125189 14 41137862 to 41137873 11 + TSS region transcription start site region 125189
Tssr125190 14 41137874 to 41137883 9 + TSS region transcription start site region 125190
Gm7920 14 41148912 to 41149104 192 + pseudogene predicted gene 7920
Tssr125191 14 41151442 to 41151512 70 + TSS region transcription start site region 125191
Mbl1 14 41151458 to 41159601 8143 + protein coding gene mannose-binding lectin (protein A) 1
Tssr125192 14 41151528 to 41151535 7 + TSS region transcription start site region 125192
Sftpd 14 41172214 to 41185149 12935 - protein coding gene surfactant associated protein D
Tssr125193 14 41172320 to 41172328 8 + TSS region transcription start site region 125193
Tssr128212 14 41185158 to 41185171 13 - TSS region transcription start site region 128212
Tssr128213 14 41185188 to 41185199 11 - TSS region transcription start site region 128213
Tssr128214 14 41185205 to 41185212 7 - TSS region transcription start site region 128214
Gm47114 14 41191401 to 41191653 252 - pseudogene predicted gene, 47114
Gm7925 14 41219463 to 41221651 2188 - pseudogene predicted gene 7925
Gm31895 14 41232267 to 41234850 2583 - lncRNA gene predicted gene, 31895
Gm22823 14 41247686 to 41247792 106 + snRNA gene predicted gene, 22823
Gm2832 14 41278805 to 41288815 10010 + protein coding gene predicted gene 2832
Gm9671 14 41307354 to 41309643 2289 - pseudogene predicted gene 9671
Gm5798 14 41348609 to 41356839 8230 + protein coding gene predicted gene 5798
Gm2855 14 41370175 to 41372374 2199 - pseudogene predicted gene 2855
Gm7945 14 41383751 to 41386229 2478 - protein coding gene predicted gene 7945
Gm6482 14 41402885 to 41408281 5396 - protein coding gene predicted gene 6482
Gm32762 14 41424608 to 41430456 5848 + lncRNA gene predicted gene, 32762
Gm7953 14 41436816 to 41439018 2202 - pseudogene predicted gene 7953
Gm7954 14 41451098 to 41453388 2290 - protein coding gene predicted gene 7954
Gm2878 14 41473616 to 41475917 2301 - pseudogene predicted gene 2878
Gm3486 14 41484232 to 41489485 5253 - protein coding gene predicted gene 3486
Gm6490 14 41518317 to 41520186 1869 + pseudogene predicted gene 6490
Gm17061 14 41538031 to 41540815 2784 - pseudogene predicted gene 17061
Gm7970 14 41550570 to 41555653 5083 - protein coding gene predicted gene 7970
1700049E17Rik2 14 41573211 to 41581305 8094 + protein coding gene tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
Gm46479 14 41606468 to 41620385 13917 + lncRNA gene predicted gene, 46479
Gm17159 14 41608857 to 41611107 2250 - pseudogene predicted gene 17159
Gm3072 14 41622216 to 41624481 2265 - protein coding gene predicted gene 3072
Gm3077 14 41631680 to 41633816 2136 - pseudogene predicted gene 3077
Gm3676 14 41641179 to 41646487 5308 - protein coding gene predicted gene 3676
Gm8065 14 41673751 to 41676835 3084 + pseudogene predicted gene 8065
Gm8068 14 41696393 to 41701885 5492 - protein coding gene predicted gene 8068
Gm7929 14 41745917 to 41750614 4697 - protein coding gene predicted gene 7929