Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:40990917-42505614

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160 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prxl2a 14 40993740 to 41013788 20048 - protein coding gene peroxiredoxin like 2A
Tssr128189 14 40994065 to 40994081 16 - TSS region transcription start site region 128189
Tssr128190 14 40994213 to 40994225 12 - TSS region transcription start site region 128190
Tssr128191 14 40994317 to 40994340 23 - TSS region transcription start site region 128191
Tssr128192 14 40994421 to 40994450 29 - TSS region transcription start site region 128192
Tssr128193 14 41004226 to 41004260 34 - TSS region transcription start site region 128193
Tssr128194 14 41004267 to 41004283 16 - TSS region transcription start site region 128194
Tssr128195 14 41004373 to 41004384 11 - TSS region transcription start site region 128195
Tssr128196 14 41004394 to 41004412 18 - TSS region transcription start site region 128196
Tssr128197 14 41004455 to 41004467 12 - TSS region transcription start site region 128197
Tssr128198 14 41004517 to 41004528 11 - TSS region transcription start site region 128198
Tssr128199 14 41006882 to 41006912 30 - TSS region transcription start site region 128199
Tssr128200 14 41008223 to 41008252 29 - TSS region transcription start site region 128200
Tssr128201 14 41008256 to 41008275 19 - TSS region transcription start site region 128201
Tssr128202 14 41008279 to 41008286 7 - TSS region transcription start site region 128202
Tssr128203 14 41008287 to 41008298 11 - TSS region transcription start site region 128203
Tssr128204 14 41008363 to 41008364 1 - TSS region transcription start site region 128204
Cpgi6351 14 41013470 to 41014000 530 CpG island CpG island 6351
Tssr128205 14 41013753 to 41013817 64 - TSS region transcription start site region 128205
Tssr128206 14 41030967 to 41030970 3 - TSS region transcription start site region 128206
Tssr128207 14 41030983 to 41030996 13 - TSS region transcription start site region 128207
Tssr128208 14 41031015 to 41031019 4 - TSS region transcription start site region 128208
Dydc2 14 41049117 to 41069208 20091 - protein coding gene DPY30 domain containing 2
Gm47547 14 41053653 to 41061614 7961 + antisense lncRNA gene predicted gene, 47547
Tssr128209 14 41069193 to 41069212 19 - TSS region transcription start site region 128209
Cpgi6352 14 41072673 to 41073049 376 CpG island CpG island 6352
Tssr125134 14 41072860 to 41072903 43 + TSS region transcription start site region 125134
Tssr125135 14 41072905 to 41072922 17 + TSS region transcription start site region 125135
Dydc1 14 41072911 to 41092197 19286 + protein coding gene DPY30 domain containing 1
Tssr125136 14 41072936 to 41072943 7 + TSS region transcription start site region 125136
Tssr125137 14 41096951 to 41096956 5 + TSS region transcription start site region 125137
Tssr125138 14 41104318 to 41104334 16 + TSS region transcription start site region 125138
Tssr125139 14 41105012 to 41105021 9 + TSS region transcription start site region 125139
Mat1a 14 41105035 to 41124412 19377 + protein coding gene methionine adenosyltransferase I, alpha
Tssr125140 14 41105204 to 41105219 15 + TSS region transcription start site region 125140
Tssr125141 14 41105359 to 41105378 19 + TSS region transcription start site region 125141
Tssr125142 14 41105544 to 41105569 25 + TSS region transcription start site region 125142
Tssr125143 14 41106848 to 41106858 10 + TSS region transcription start site region 125143
Tssr125144 14 41109518 to 41109521 3 + TSS region transcription start site region 125144
Tssr125145 14 41111066 to 41111077 11 + TSS region transcription start site region 125145
Tssr125146 14 41114212 to 41114223 11 + TSS region transcription start site region 125146
Tssr125147 14 41114255 to 41114260 5 + TSS region transcription start site region 125147
Tssr125148 14 41114753 to 41114775 22 + TSS region transcription start site region 125148
Tssr125149 14 41114818 to 41114827 9 + TSS region transcription start site region 125149
Tssr125150 14 41114862 to 41114883 21 + TSS region transcription start site region 125150
Tssr125151 14 41114927 to 41114938 11 + TSS region transcription start site region 125151
Tssr125152 14 41115148 to 41115157 9 + TSS region transcription start site region 125152
Tssr125153 14 41115239 to 41115270 31 + TSS region transcription start site region 125153
Tssr125154 14 41115886 to 41115918 32 + TSS region transcription start site region 125154
Tssr125155 14 41116192 to 41116203 11 + TSS region transcription start site region 125155
Tssr125156 14 41116653 to 41116669 16 + TSS region transcription start site region 125156
Tssr125157 14 41116710 to 41116724 14 + TSS region transcription start site region 125157
Tssr125158 14 41117092 to 41117104 12 + TSS region transcription start site region 125158
Tssr125159 14 41121387 to 41121414 27 + TSS region transcription start site region 125159
Tssr125160 14 41121797 to 41121808 11 + TSS region transcription start site region 125160
Tssr125161 14 41122500 to 41122511 11 + TSS region transcription start site region 125161
Tssr128210 14 41122529 to 41122556 27 - TSS region transcription start site region 128210
Tssr125162 14 41122539 to 41122549 10 + TSS region transcription start site region 125162
Tssr125163 14 41122556 to 41122573 17 + TSS region transcription start site region 125163
Tssr125164 14 41122574 to 41122586 12 + TSS region transcription start site region 125164
Tssr125165 14 41122705 to 41122739 34 + TSS region transcription start site region 125165
Tssr125166 14 41122788 to 41122797 9 + TSS region transcription start site region 125166
Tssr125167 14 41122816 to 41122828 12 + TSS region transcription start site region 125167
Tssr125168 14 41122892 to 41122915 23 + TSS region transcription start site region 125168
Tssr125169 14 41123545 to 41123562 17 + TSS region transcription start site region 125169
Tssr125170 14 41131777 to 41131794 17 + TSS region transcription start site region 125170
Sftpa1 14 41131788 to 41136373 4585 + protein coding gene surfactant associated protein A1
Tssr125171 14 41132296 to 41132304 8 + TSS region transcription start site region 125171
Tssr125172 14 41134100 to 41134111 11 + TSS region transcription start site region 125172
Tssr125173 14 41134304 to 41134315 11 + TSS region transcription start site region 125173
Tssr128211 14 41134397 to 41134412 15 - TSS region transcription start site region 128211
Tssr125174 14 41134406 to 41134413 7 + TSS region transcription start site region 125174
Tssr125175 14 41134636 to 41134652 16 + TSS region transcription start site region 125175
Tssr125176 14 41136345 to 41136355 10 + TSS region transcription start site region 125176
Tssr125177 14 41136410 to 41136424 14 + TSS region transcription start site region 125177
Tssr125178 14 41136431 to 41136442 11 + TSS region transcription start site region 125178
Tssr125179 14 41136590 to 41136607 17 + TSS region transcription start site region 125179
Tssr125180 14 41136633 to 41136646 13 + TSS region transcription start site region 125180
Tssr125181 14 41136675 to 41136690 15 + TSS region transcription start site region 125181
Tssr125182 14 41137344 to 41137353 9 + TSS region transcription start site region 125182
Tssr125183 14 41137391 to 41137403 12 + TSS region transcription start site region 125183
Tssr125184 14 41137441 to 41137452 11 + TSS region transcription start site region 125184
Tssr125185 14 41137608 to 41137633 25 + TSS region transcription start site region 125185
Tssr125186 14 41137739 to 41137747 8 + TSS region transcription start site region 125186
Tssr125187 14 41137807 to 41137823 16 + TSS region transcription start site region 125187
Tssr125188 14 41137836 to 41137851 15 + TSS region transcription start site region 125188
Tssr125189 14 41137862 to 41137873 11 + TSS region transcription start site region 125189
Tssr125190 14 41137874 to 41137883 9 + TSS region transcription start site region 125190
Gm7920 14 41148912 to 41149104 192 + pseudogene predicted gene 7920
Tssr125191 14 41151442 to 41151512 70 + TSS region transcription start site region 125191
Mbl1 14 41151458 to 41159601 8143 + protein coding gene mannose-binding lectin (protein A) 1
Tssr125192 14 41151528 to 41151535 7 + TSS region transcription start site region 125192
Sftpd 14 41172214 to 41185149 12935 - protein coding gene surfactant associated protein D
Tssr125193 14 41172320 to 41172328 8 + TSS region transcription start site region 125193
Tssr128212 14 41185158 to 41185171 13 - TSS region transcription start site region 128212
Tssr128213 14 41185188 to 41185199 11 - TSS region transcription start site region 128213
Tssr128214 14 41185205 to 41185212 7 - TSS region transcription start site region 128214
Gm47114 14 41191401 to 41191653 252 - pseudogene predicted gene, 47114
Gm7925 14 41219463 to 41221651 2188 - pseudogene predicted gene 7925
Gm31895 14 41232267 to 41234850 2583 - lncRNA gene predicted gene, 31895
Gm22823 14 41247686 to 41247792 106 + snRNA gene predicted gene, 22823
Gm2832 14 41278805 to 41288815 10010 + protein coding gene predicted gene 2832
Gm9671 14 41307354 to 41309643 2289 - pseudogene predicted gene 9671
Gm5798 14 41348609 to 41356839 8230 + protein coding gene predicted gene 5798
Gm2855 14 41370175 to 41372374 2199 - pseudogene predicted gene 2855
Gm7945 14 41383751 to 41386229 2478 - protein coding gene predicted gene 7945
Gm6482 14 41402885 to 41408281 5396 - protein coding gene predicted gene 6482
Gm32762 14 41424608 to 41430456 5848 + lncRNA gene predicted gene, 32762
Gm7953 14 41436816 to 41439018 2202 - pseudogene predicted gene 7953
Gm7954 14 41451098 to 41453388 2290 - protein coding gene predicted gene 7954
Gm2878 14 41473616 to 41475917 2301 - pseudogene predicted gene 2878
Gm3486 14 41484232 to 41489485 5253 - protein coding gene predicted gene 3486
Gm6490 14 41518317 to 41520186 1869 + pseudogene predicted gene 6490
Gm17061 14 41538031 to 41540815 2784 - pseudogene predicted gene 17061
Gm7970 14 41550570 to 41555653 5083 - protein coding gene predicted gene 7970
1700049E17Rik2 14 41573211 to 41581305 8094 + protein coding gene tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
Gm46479 14 41606468 to 41620385 13917 + lncRNA gene predicted gene, 46479
Gm17159 14 41608857 to 41611107 2250 - pseudogene predicted gene 17159
Gm3072 14 41622216 to 41624481 2265 - protein coding gene predicted gene 3072
Gm3077 14 41631680 to 41633816 2136 - pseudogene predicted gene 3077
Gm3676 14 41641179 to 41646487 5308 - protein coding gene predicted gene 3676
Gm8065 14 41673751 to 41676835 3084 + pseudogene predicted gene 8065
Gm8068 14 41696393 to 41701885 5492 - protein coding gene predicted gene 8068
Gm7929 14 41745917 to 41750614 4697 - protein coding gene predicted gene 7929
Gm47189 14 41767172 to 41772441 5269 - protein coding gene predicted gene, 47189
Gm17062 14 41889687 to 41892459 2772 - pseudogene predicted gene 17062
Gm7980 14 41902263 to 41907280 5017 - protein coding gene predicted gene 7980
1700049E17Rik1 14 41924949 to 41933041 8092 + protein coding gene RIKEN cDNA 1700049E17 gene, gene 1
1700024B05Rik 14 41943995 to 42003821 59826 + protein coding gene RIKEN cDNA 1700024B05 gene
Gm9890 14 41946433 to 41948671 2238 - pseudogene predicted gene 9890
Gm6401 14 41962708 to 41967927 5219 - protein coding gene predicted gene 6401
Gm3543 14 41977873 to 41983325 5452 - protein coding gene predicted gene 3543
1700016D02Rik 14 42023077 to 42036801 13724 unclassified gene RIKEN cDNA 1700016D02 gene
Gm17063 14 42025476 to 42027672 2196 - pseudogene predicted gene 17063
Gm2930 14 42037609 to 42040012 2403 - pseudogene predicted gene 2930
Gm7991 14 42067059 to 42070137 3078 + pseudogene predicted gene 7991
1700091H14Rik 14 42089750 to 42095277 5527 - lncRNA gene RIKEN cDNA 1700091H14 gene
Gm7951 14 42114803 to 42117238 2435 - protein coding gene predicted gene 7951
Gm41135 14 42124186 to 42129546 5360 - lncRNA gene predicted gene, 41135
Gm5376 14 42134452 to 42139693 5241 + unclassified gene predicted gene 5376
Gm17064 14 42145893 to 42148119 2226 - pseudogene predicted gene 17064
Gm17027 14 42160200 to 42162492 2292 - protein coding gene predicted gene 17027
Gm17166 14 42175704 to 42178006 2302 - pseudogene predicted gene 17166
Gm3573 14 42185391 to 42190791 5400 - protein coding gene predicted gene 3573
Gm17165 14 42218285 to 42220283 1998 + pseudogene predicted gene 17165
Gm46449 14 42227166 to 42232411 5245 - pseudogene predicted gene, 46449
Gm17038 14 42243217 to 42245444 2227 - pseudogene predicted gene 17038
Gm17026 14 42254659 to 42260048 5389 - protein coding gene predicted gene 17026
Gm25208 14 42274419 to 42274539 120 - miRNA gene predicted gene, 25208
Gm25892 14 42280342 to 42280462 120 - miRNA gene predicted gene, 25892
Gm9611 14 42293794 to 42297348 3554 - protein coding gene predicted gene 9611
Gm7995 14 42310217 to 42325396 15179 + protein coding gene predicted gene 7995
Gm17164 14 42359209 to 42361450 2241 - pseudogene predicted gene 17164
Gm2951 14 42371350 to 42373777 2427 - pseudogene predicted gene 2951
Gm2959 14 42411451 to 42414526 3075 + pseudogene predicted gene 2959
Gm8005 14 42434261 to 42439663 5402 - protein coding gene predicted gene 8005
Gm49360 14 42452905 to 42453082 177 + pseudogene predicted gene, 49360
Gm8011 14 42463881 to 42472122 8241 + protein coding gene predicted gene 8011
Gm2966 14 42485417 to 42487658 2241 - pseudogene predicted gene 2966
Gm8020 14 42499749 to 42502219 2470 - protein coding gene predicted gene 8020