Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:38105139-40335141

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125120 14 38117696 to 38117698 2 + TSS region transcription start site region 125120
D14Mit247 14 38126774 to 38126921 147 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-247
Gm31456 14 38317904 to 38337126 19222 + lincRNA gene predicted gene, 31456
Nrg3 14 38368952 to 39473088 1104136 - protein coding gene neuregulin 3
Tssr125121 14 38380449 to 38380471 22 + TSS region transcription start site region 125121
Gm3386 14 38380456 to 38380872 416 + pseudogene predicted gene 3386
Gm20641 14 38522049 to 38532311 10262 + antisense lncRNA gene predicted gene 20641
Tssr128140 14 38617938 to 38617941 3 - TSS region transcription start site region 128140
Tssr125122 14 38626747 to 38626750 3 + TSS region transcription start site region 125122
Tssr128141 14 38657975 to 38657990 15 - TSS region transcription start site region 128141
Tssr128142 14 38701910 to 38701914 4 - TSS region transcription start site region 128142
Tssr128143 14 38710437 to 38710440 3 - TSS region transcription start site region 128143
Gm46486 14 38802884 to 38898182 95298 - lncRNA gene predicted gene, 46486
Tssr128144 14 38804046 to 38804063 17 - TSS region transcription start site region 128144
Tssr128145 14 38833405 to 38833417 12 - TSS region transcription start site region 128145
Tssr128146 14 38833444 to 38833457 13 - TSS region transcription start site region 128146
A830055N07Rik 14 38851334 to 38856758 5424 unclassified gene RIKEN cDNA A830055N07 gene
Tssr128147 14 38880999 to 38881016 17 - TSS region transcription start site region 128147
Tssr128148 14 38898194 to 38898199 5 - TSS region transcription start site region 128148
Tssr125123 14 38898300 to 38898303 3 + TSS region transcription start site region 125123
Nrg3os 14 38898302 to 38958794 60492 + antisense lncRNA gene neuregulin 3, opposite strand
Gm27332 14 38899833 to 38899944 111 - miRNA gene predicted gene, 27332
9330199C07Rik 14 38936424 to 38937442 1018 unclassified gene RIKEN cDNA 9330199C07 gene
D14Mit213 14 38990242 to 38990343 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 213
Tssr128149 14 38998773 to 38998777 4 - TSS region transcription start site region 128149
Tssr128150 14 39001720 to 39001756 36 - TSS region transcription start site region 128150
Tssr128151 14 39146828 to 39146831 3 - TSS region transcription start site region 128151
Tssr128152 14 39208764 to 39208798 34 - TSS region transcription start site region 128152
Tssr125124 14 39220109 to 39220125 16 + TSS region transcription start site region 125124
Tssr125125 14 39220139 to 39220141 2 + TSS region transcription start site region 125125
Gm20642 14 39220222 to 39249746 29524 + antisense lncRNA gene predicted gene 20642
Tssr128153 14 39223335 to 39223341 6 - TSS region transcription start site region 128153
Tssr128154 14 39240185 to 39240195 10 - TSS region transcription start site region 128154
Tssr128155 14 39240244 to 39240255 11 - TSS region transcription start site region 128155
Tssr128156 14 39242491 to 39242496 5 - TSS region transcription start site region 128156
Tssr128157 14 39244108 to 39244110 2 - TSS region transcription start site region 128157
Tssr128158 14 39361156 to 39361170 14 - TSS region transcription start site region 128158
Tssr128159 14 39385206 to 39385211 5 - TSS region transcription start site region 128159
Tssr128160 14 39388379 to 39388415 36 - TSS region transcription start site region 128160
Tssr128161 14 39392197 to 39392202 5 - TSS region transcription start site region 128161
Gm31606 14 39406540 to 39418868 12328 - protein coding gene predicted gene, 31606
Gm18785 14 39429607 to 39430737 1130 + pseudogene predicted gene, 18785
Tssr128162 14 39429926 to 39429942 16 - TSS region transcription start site region 128162
D14Abb2e 14 39468444 to 39468570 126 DNA segment DNA segment, Chr 14, Abbott 2 expressed
Tssr128163 14 39471188 to 39471191 3 - TSS region transcription start site region 128163
Cpgi6348 14 39471913 to 39474201 2288 CpG island CpG island 6348
Tssr128164 14 39472111 to 39472128 17 - TSS region transcription start site region 128164
AI413391 14 39472429 to 39476257 3828 + lncRNA gene expressed sequence AI413391
Tssr128165 14 39472902 to 39472956 54 - TSS region transcription start site region 128165
Tssr128166 14 39473456 to 39473508 52 - TSS region transcription start site region 128166
Tssr128167 14 39473513 to 39473529 16 - TSS region transcription start site region 128167
Tssr128168 14 39473618 to 39473630 12 - TSS region transcription start site region 128168
Tssr128169 14 39473841 to 39473870 29 - TSS region transcription start site region 128169
Tssr128170 14 39474023 to 39474046 23 - TSS region transcription start site region 128170
Tssr128171 14 39474048 to 39474079 31 - TSS region transcription start site region 128171
Tssr125126 14 39655361 to 39655373 12 + TSS region transcription start site region 125126
Tssr125127 14 39655648 to 39655675 27 + TSS region transcription start site region 125127
1700109I08Rik 14 39655663 to 39685293 29630 + lincRNA gene RIKEN cDNA 1700109I08 gene
Gm35389 14 39839784 to 39840009 225 - pseudogene predicted gene, 35389
Tssr125128 14 39980523 to 39980526 3 + TSS region transcription start site region 125128
D14Mit212 14 40003816 to 40003917 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 212
Eif1-ps1 14 40006220 to 40006549 329 + pseudogene eukaryotic translation initiation factor 1, pseudogene 1
Gm25012 14 40009902 to 40010065 163 + snRNA gene predicted gene, 25012
Tssr125129 14 40081794 to 40081803 9 + TSS region transcription start site region 125129
Gm22191 14 40215132 to 40215241 109 - miRNA gene predicted gene, 22191
Gm4817 14 40294120 to 40295530 1410 - pseudogene predicted gene 4817
Tssr128172 14 40294739 to 40294742 3 - TSS region transcription start site region 128172
Tssr128173 14 40295558 to 40295572 14 - TSS region transcription start site region 128173
Gm22726 14 40318072 to 40318250 178 - unclassified non-coding RNA gene predicted gene, 22726
Gm48028 14 40329444 to 40329717 273 + pseudogene predicted gene, 48028