Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:37063952-40778088

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrit1 14 37054830 to 37064946 10116 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
Lrit2 14 37067991 to 37073743 5752 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
Tssr125115 14 37068013 to 37068024 11 + TSS region transcription start site region 125115
Tssr125116 14 37068042 to 37068054 12 + TSS region transcription start site region 125116
Tssr125117 14 37068057 to 37068064 7 + TSS region transcription start site region 125117
Cdhr1 14 37077849 to 37098311 20462 - protein coding gene cadherin-related family member 1
Cpgi6346 14 37098005 to 37098501 496 CpG island CpG island 6346
Tssr128121 14 37098211 to 37098280 69 - TSS region transcription start site region 128121
Tssr128122 14 37098348 to 37098363 15 - TSS region transcription start site region 128122
2610528A11Rik 14 37102140 to 37110101 7961 - protein coding gene RIKEN cDNA 2610528A11 gene
Tssr128123 14 37102238 to 37102250 12 - TSS region transcription start site region 128123
Tssr128124 14 37110025 to 37110061 36 - TSS region transcription start site region 128124
Tssr128125 14 37110065 to 37110077 12 - TSS region transcription start site region 128125
Tssr128126 14 37110087 to 37110106 19 - TSS region transcription start site region 128126
Tssr128127 14 37114012 to 37114027 15 - TSS region transcription start site region 128127
Ghitm 14 37120444 to 37135322 14878 - protein coding gene growth hormone inducible transmembrane protein
Tssr128128 14 37121633 to 37121649 16 - TSS region transcription start site region 128128
Tssr128129 14 37125308 to 37125334 26 - TSS region transcription start site region 128129
Tssr4376 14 37131254 to 37131271 17 - TSS region transcription start site region 4376
Cpgi6347 14 37134683 to 37135659 976 CpG island CpG island 6347
Tssr128130 14 37135089 to 37135098 9 - TSS region transcription start site region 128130
Tssr128131 14 37135126 to 37135141 15 - TSS region transcription start site region 128131
Tssr128132 14 37135153 to 37135172 19 - TSS region transcription start site region 128132
Tssr128133 14 37135186 to 37135197 11 - TSS region transcription start site region 128133
Tssr128134 14 37135230 to 37135241 11 - TSS region transcription start site region 128134
Tssr128135 14 37135245 to 37135271 26 - TSS region transcription start site region 128135
Tssr128136 14 37135274 to 37135308 34 - TSS region transcription start site region 128136
Tssr128137 14 37135310 to 37135321 11 - TSS region transcription start site region 128137
Tssr125118 14 37135473 to 37135501 28 + TSS region transcription start site region 125118
Tssr128138 14 37136006 to 37136015 9 - TSS region transcription start site region 128138
D14Mit150 14 37155938 to 37156075 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 150
Gm18834 14 37182238 to 37183016 778 - pseudogene predicted gene, 18834
D14Mit3 14 37209474 to 37209701 227 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 3
Gm22469 14 37224869 to 37225001 132 + snoRNA gene predicted gene, 22469
Tssr4377 14 37360570 to 37360572 2 + TSS region transcription start site region 4377
Gm23909 14 37437490 to 37437620 130 - snoRNA gene predicted gene, 23909
Gm47971 14 37465822 to 37467898 2076 - unclassified gene predicted gene, 47971
Tssr125119 14 37581098 to 37581101 3 + TSS region transcription start site region 125119
Tssr128139 14 37581836 to 37581841 5 - TSS region transcription start site region 128139
Gm31393 14 37601107 to 37606788 5681 - lincRNA gene predicted gene, 31393
Gm5203 14 37722117 to 37722937 820 + pseudogene predicted gene 5203
Gm5204 14 37911848 to 37912698 850 - pseudogene predicted gene 5204
Gm47974 14 38047983 to 38051136 3153 + pseudogene predicted gene, 47974
Gm18523 14 38074111 to 38074901 790 + pseudogene predicted gene, 18523
Tssr125120 14 38117696 to 38117698 2 + TSS region transcription start site region 125120
D14Mit247 14 38126774 to 38126921 147 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-247
Gm31456 14 38317904 to 38337126 19222 + lincRNA gene predicted gene, 31456
Nrg3 14 38368952 to 39473088 1104136 - protein coding gene neuregulin 3
Tssr125121 14 38380449 to 38380471 22 + TSS region transcription start site region 125121
Gm3386 14 38380456 to 38380872 416 + pseudogene predicted gene 3386
Gm20641 14 38522049 to 38532311 10262 + antisense lncRNA gene predicted gene 20641
Tssr128140 14 38617938 to 38617941 3 - TSS region transcription start site region 128140
Tssr125122 14 38626747 to 38626750 3 + TSS region transcription start site region 125122
Tssr128141 14 38657975 to 38657990 15 - TSS region transcription start site region 128141
Tssr128142 14 38701910 to 38701914 4 - TSS region transcription start site region 128142
Tssr128143 14 38710437 to 38710440 3 - TSS region transcription start site region 128143
Gm46486 14 38802884 to 38898182 95298 - lncRNA gene predicted gene, 46486
Tssr128144 14 38804046 to 38804063 17 - TSS region transcription start site region 128144
Tssr128145 14 38833405 to 38833417 12 - TSS region transcription start site region 128145
Tssr128146 14 38833444 to 38833457 13 - TSS region transcription start site region 128146
A830055N07Rik 14 38851334 to 38856758 5424 unclassified gene RIKEN cDNA A830055N07 gene
Tssr128147 14 38880999 to 38881016 17 - TSS region transcription start site region 128147
Tssr128148 14 38898194 to 38898199 5 - TSS region transcription start site region 128148
Tssr125123 14 38898300 to 38898303 3 + TSS region transcription start site region 125123
Nrg3os 14 38898302 to 38958794 60492 + antisense lncRNA gene neuregulin 3, opposite strand
Gm27332 14 38899833 to 38899944 111 - miRNA gene predicted gene, 27332
9330199C07Rik 14 38936424 to 38937442 1018 unclassified gene RIKEN cDNA 9330199C07 gene
D14Mit213 14 38990242 to 38990343 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 213
Tssr128149 14 38998773 to 38998777 4 - TSS region transcription start site region 128149
Tssr128150 14 39001720 to 39001756 36 - TSS region transcription start site region 128150
Tssr128151 14 39146828 to 39146831 3 - TSS region transcription start site region 128151
Tssr128152 14 39208764 to 39208798 34 - TSS region transcription start site region 128152
Tssr125124 14 39220109 to 39220125 16 + TSS region transcription start site region 125124
Tssr125125 14 39220139 to 39220141 2 + TSS region transcription start site region 125125
Gm20642 14 39220222 to 39249746 29524 + antisense lncRNA gene predicted gene 20642
Tssr128153 14 39223335 to 39223341 6 - TSS region transcription start site region 128153
Tssr128154 14 39240185 to 39240195 10 - TSS region transcription start site region 128154
Tssr128155 14 39240244 to 39240255 11 - TSS region transcription start site region 128155
Tssr128156 14 39242491 to 39242496 5 - TSS region transcription start site region 128156
Tssr128157 14 39244108 to 39244110 2 - TSS region transcription start site region 128157
Tssr128158 14 39361156 to 39361170 14 - TSS region transcription start site region 128158
Tssr128159 14 39385206 to 39385211 5 - TSS region transcription start site region 128159
Tssr128160 14 39388379 to 39388415 36 - TSS region transcription start site region 128160
Tssr128161 14 39392197 to 39392202 5 - TSS region transcription start site region 128161
Gm31606 14 39406540 to 39418868 12328 - protein coding gene predicted gene, 31606
Gm18785 14 39429607 to 39430737 1130 + pseudogene predicted gene, 18785
Tssr128162 14 39429926 to 39429942 16 - TSS region transcription start site region 128162
D14Abb2e 14 39468444 to 39468570 126 DNA segment DNA segment, Chr 14, Abbott 2 expressed
Tssr128163 14 39471188 to 39471191 3 - TSS region transcription start site region 128163
Cpgi6348 14 39471913 to 39474201 2288 CpG island CpG island 6348
Tssr128164 14 39472111 to 39472128 17 - TSS region transcription start site region 128164
AI413391 14 39472429 to 39476257 3828 + lncRNA gene expressed sequence AI413391
Tssr128165 14 39472902 to 39472956 54 - TSS region transcription start site region 128165
Tssr128166 14 39473456 to 39473508 52 - TSS region transcription start site region 128166
Tssr128167 14 39473513 to 39473529 16 - TSS region transcription start site region 128167
Tssr128168 14 39473618 to 39473630 12 - TSS region transcription start site region 128168
Tssr128169 14 39473841 to 39473870 29 - TSS region transcription start site region 128169
Tssr128170 14 39474023 to 39474046 23 - TSS region transcription start site region 128170
Tssr128171 14 39474048 to 39474079 31 - TSS region transcription start site region 128171
Tssr125126 14 39655361 to 39655373 12 + TSS region transcription start site region 125126
Tssr125127 14 39655648 to 39655675 27 + TSS region transcription start site region 125127
1700109I08Rik 14 39655663 to 39685293 29630 + lincRNA gene RIKEN cDNA 1700109I08 gene
Gm35389 14 39839784 to 39840009 225 - pseudogene predicted gene, 35389
Tssr125128 14 39980523 to 39980526 3 + TSS region transcription start site region 125128
D14Mit212 14 40003816 to 40003917 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 212
Eif1-ps1 14 40006220 to 40006549 329 + pseudogene eukaryotic translation initiation factor 1, pseudogene 1
Gm25012 14 40009902 to 40010065 163 + snRNA gene predicted gene, 25012
Tssr125129 14 40081794 to 40081803 9 + TSS region transcription start site region 125129
Gm22191 14 40215132 to 40215241 109 - miRNA gene predicted gene, 22191
Gm4817 14 40294120 to 40295530 1410 - pseudogene predicted gene 4817
Tssr128172 14 40294739 to 40294742 3 - TSS region transcription start site region 128172
Tssr128173 14 40295558 to 40295572 14 - TSS region transcription start site region 128173
Gm22726 14 40318072 to 40318250 178 - unclassified non-coding RNA gene predicted gene, 22726
Gm48028 14 40329444 to 40329717 273 + pseudogene predicted gene, 48028
Gm24388 14 40421515 to 40421621 106 + snRNA gene predicted gene, 24388
Tssr125130 14 40448387 to 40448389 2 + TSS region transcription start site region 125130
Gm2791 14 40449115 to 40449618 503 + pseudogene predicted gene 2791
Tssr125131 14 40557168 to 40557170 2 + TSS region transcription start site region 125131
Gm5205 14 40557238 to 40558240 1002 + pseudogene predicted gene 5205
Gm48040 14 40747227 to 40748499 1272 + pseudogene predicted gene, 48040