Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:36615570-38105572

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17940 14 36619421 to 36620087 666 + pseudogene predicted gene, 17940
Tssr125107 14 36659121 to 36659125 4 + TSS region transcription start site region 125107
Gm25204 14 36767425 to 36767530 105 + snRNA gene predicted gene, 25204
Tssr128102 14 36774496 to 36774501 5 - TSS region transcription start site region 128102
n-R5s46 14 36855929 to 36856044 115 - rRNA gene nuclear encoded rRNA 5S 46
Ccser2 14 36874936 to 36968772 93836 - protein coding gene coiled-coil serine rich 2
Tssr128103 14 36906271 to 36906302 31 - TSS region transcription start site region 128103
Tssr128104 14 36906305 to 36906315 10 - TSS region transcription start site region 128104
Tssr128105 14 36906316 to 36906323 7 - TSS region transcription start site region 128105
Tssr128106 14 36911420 to 36911453 33 - TSS region transcription start site region 128106
Tssr128107 14 36919314 to 36919352 38 - TSS region transcription start site region 128107
Tssr128108 14 36919375 to 36919385 10 - TSS region transcription start site region 128108
Tssr128109 14 36919427 to 36919443 16 - TSS region transcription start site region 128109
Tssr128110 14 36919513 to 36919539 26 - TSS region transcription start site region 128110
Tssr128111 14 36919551 to 36919562 11 - TSS region transcription start site region 128111
Tssr128112 14 36922414 to 36922417 3 - TSS region transcription start site region 128112
Tssr128113 14 36935546 to 36935553 7 - TSS region transcription start site region 128113
Tssr128114 14 36935560 to 36935578 18 - TSS region transcription start site region 128114
Tssr128115 14 36935587 to 36935590 3 - TSS region transcription start site region 128115
Tssr128116 14 36935615 to 36935618 3 - TSS region transcription start site region 128116
Cpgi6344 14 36968220 to 36969141 921 CpG island CpG island 6344
Tssr128117 14 36968679 to 36968738 59 - TSS region transcription start site region 128117
Tssr128118 14 36968747 to 36968766 19 - TSS region transcription start site region 128118
Tssr128119 14 36968769 to 36968793 24 - TSS region transcription start site region 128119
Tssr125108 14 36968864 to 36968882 18 + TSS region transcription start site region 125108
Gm31131 14 36968871 to 36984705 15834 + lncRNA gene predicted gene, 31131
Tssr125109 14 36970005 to 36970016 11 + TSS region transcription start site region 125109
Tssr125110 14 36970020 to 36970030 10 + TSS region transcription start site region 125110
Tssr125111 14 36970041 to 36970050 9 + TSS region transcription start site region 125111
Tssr125112 14 36970101 to 36970112 11 + TSS region transcription start site region 125112
Gm47885 14 37023959 to 37024534 575 - pseudogene predicted gene, 47885
Rgr 14 37034909 to 37048964 14055 - protein coding gene retinal G protein coupled receptor
Tssr128120 14 37048957 to 37048970 13 - TSS region transcription start site region 128120
Tssr4375 14 37049023 to 37049028 5 - TSS region transcription start site region 4375
Tssr125113 14 37054818 to 37054853 35 + TSS region transcription start site region 125113
Lrit1 14 37054830 to 37064946 10116 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
Tssr125114 14 37054859 to 37054862 3 + TSS region transcription start site region 125114
Cpgi6345 14 37057326 to 37057572 246 CpG island CpG island 6345
Lrit2 14 37067991 to 37073743 5752 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
Tssr125115 14 37068013 to 37068024 11 + TSS region transcription start site region 125115
Tssr125116 14 37068042 to 37068054 12 + TSS region transcription start site region 125116
Tssr125117 14 37068057 to 37068064 7 + TSS region transcription start site region 125117
Cdhr1 14 37077849 to 37098311 20462 - protein coding gene cadherin-related family member 1
Cpgi6346 14 37098005 to 37098501 496 CpG island CpG island 6346
Tssr128121 14 37098211 to 37098280 69 - TSS region transcription start site region 128121
Tssr128122 14 37098348 to 37098363 15 - TSS region transcription start site region 128122
2610528A11Rik 14 37102140 to 37110101 7961 - protein coding gene RIKEN cDNA 2610528A11 gene
Tssr128123 14 37102238 to 37102250 12 - TSS region transcription start site region 128123
Tssr128124 14 37110025 to 37110061 36 - TSS region transcription start site region 128124
Tssr128125 14 37110065 to 37110077 12 - TSS region transcription start site region 128125
Tssr128126 14 37110087 to 37110106 19 - TSS region transcription start site region 128126
Tssr128127 14 37114012 to 37114027 15 - TSS region transcription start site region 128127
Ghitm 14 37120444 to 37135322 14878 - protein coding gene growth hormone inducible transmembrane protein
Tssr128128 14 37121633 to 37121649 16 - TSS region transcription start site region 128128
Tssr128129 14 37125308 to 37125334 26 - TSS region transcription start site region 128129
Tssr4376 14 37131254 to 37131271 17 - TSS region transcription start site region 4376
Cpgi6347 14 37134683 to 37135659 976 CpG island CpG island 6347
Tssr128130 14 37135089 to 37135098 9 - TSS region transcription start site region 128130
Tssr128131 14 37135126 to 37135141 15 - TSS region transcription start site region 128131
Tssr128132 14 37135153 to 37135172 19 - TSS region transcription start site region 128132
Tssr128133 14 37135186 to 37135197 11 - TSS region transcription start site region 128133
Tssr128134 14 37135230 to 37135241 11 - TSS region transcription start site region 128134
Tssr128135 14 37135245 to 37135271 26 - TSS region transcription start site region 128135
Tssr128136 14 37135274 to 37135308 34 - TSS region transcription start site region 128136
Tssr128137 14 37135310 to 37135321 11 - TSS region transcription start site region 128137
Tssr125118 14 37135473 to 37135501 28 + TSS region transcription start site region 125118
Tssr128138 14 37136006 to 37136015 9 - TSS region transcription start site region 128138
D14Mit150 14 37155938 to 37156075 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 150
Gm18834 14 37182238 to 37183016 778 - pseudogene predicted gene, 18834
D14Mit3 14 37209474 to 37209701 227 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 3
Gm22469 14 37224869 to 37225001 132 + snoRNA gene predicted gene, 22469
Tssr4377 14 37360570 to 37360572 2 + TSS region transcription start site region 4377
Gm23909 14 37437490 to 37437620 130 - snoRNA gene predicted gene, 23909
Gm47971 14 37465822 to 37467898 2076 - unclassified gene predicted gene, 47971
Tssr125119 14 37581098 to 37581101 3 + TSS region transcription start site region 125119
Tssr128139 14 37581836 to 37581841 5 - TSS region transcription start site region 128139
Gm31393 14 37601107 to 37606788 5681 - lincRNA gene predicted gene, 31393
Gm5203 14 37722117 to 37722937 820 + pseudogene predicted gene 5203
Gm5204 14 37911848 to 37912698 850 - pseudogene predicted gene 5204
Gm47974 14 38047983 to 38051136 3153 + pseudogene predicted gene, 47974
Gm18523 14 38074111 to 38074901 790 + pseudogene predicted gene, 18523