Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:35226441-37237041

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grid1 14 34820108 to 35583379 763271 + protein coding gene glutamate receptor, ionotropic, delta 1
Tssr125103 14 35247420 to 35247427 7 + TSS region transcription start site region 125103
D14Mit54 14 35323840 to 35323971 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 54
Cosz2 14 35323840 to 68548287 33224447 QTL cocaine seizure 2
D14Mit149 14 35323850 to 35323971 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 149
Gm19016 14 35548132 to 35549126 994 - pseudogene predicted gene, 19016
Tssr4373 14 35568495 to 35568499 4 + TSS region transcription start site region 4373
Gm27617 14 35569953 to 35570120 167 + unclassified non-coding RNA gene predicted gene, 27617
Tssr125104 14 35580838 to 35580874 36 + TSS region transcription start site region 125104
4930596D02Rik 14 35809488 to 35811978 2490 - protein coding gene RIKEN cDNA 4930596D02 gene
Tssr128100 14 35811965 to 35811999 34 - TSS region transcription start site region 128100
Tssr128101 14 35812007 to 35812010 3 - TSS region transcription start site region 128101
Gm49039 14 35820609 to 35821060 451 + pseudogene predicted gene, 49039
Gm49040 14 35980994 to 35981268 274 + pseudogene predicted gene, 49040
Gm46474 14 36013948 to 36015385 1437 + pseudogene predicted gene, 46474
Gm19129 14 36050606 to 36051222 616 + pseudogene predicted gene, 19129
D14Mit53 14 36072579 to 36072735 156 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 53
Gm7853 14 36089359 to 36090816 1457 - pseudogene predicted gene 7853
4930474N05Rik 14 36094942 to 36097401 2459 + protein coding gene RIKEN cDNA 4930474N05 gene
Tssr4374 14 36094960 to 36094969 9 + TSS region transcription start site region 4374
Sluc13 14 36105647 to 36105769 122 QTL susceptibility to lung cancer 13
D14Mit120 14 36105647 to 36105769 122 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 120
Gm48663 14 36231441 to 36232041 600 - pseudogene predicted gene, 48663
Tssr125105 14 36316921 to 36316928 7 + TSS region transcription start site region 125105
Tssr125106 14 36317070 to 36317074 4 + TSS region transcription start site region 125106
Gm24394 14 36612117 to 36612239 122 + snoRNA gene predicted gene, 24394
Gm17940 14 36619421 to 36620087 666 + pseudogene predicted gene, 17940
Tssr125107 14 36659121 to 36659125 4 + TSS region transcription start site region 125107
Gm25204 14 36767425 to 36767530 105 + snRNA gene predicted gene, 25204
Tssr128102 14 36774496 to 36774501 5 - TSS region transcription start site region 128102
n-R5s46 14 36855929 to 36856044 115 - rRNA gene nuclear encoded rRNA 5S 46
Ccser2 14 36874936 to 36968772 93836 - protein coding gene coiled-coil serine rich 2
Tssr128103 14 36906271 to 36906302 31 - TSS region transcription start site region 128103
Tssr128104 14 36906305 to 36906315 10 - TSS region transcription start site region 128104
Tssr128105 14 36906316 to 36906323 7 - TSS region transcription start site region 128105
Tssr128106 14 36911420 to 36911453 33 - TSS region transcription start site region 128106
Tssr128107 14 36919314 to 36919352 38 - TSS region transcription start site region 128107
Tssr128108 14 36919375 to 36919385 10 - TSS region transcription start site region 128108
Tssr128109 14 36919427 to 36919443 16 - TSS region transcription start site region 128109
Tssr128110 14 36919513 to 36919539 26 - TSS region transcription start site region 128110
Tssr128111 14 36919551 to 36919562 11 - TSS region transcription start site region 128111
Tssr128112 14 36922414 to 36922417 3 - TSS region transcription start site region 128112
Tssr128113 14 36935546 to 36935553 7 - TSS region transcription start site region 128113
Tssr128114 14 36935560 to 36935578 18 - TSS region transcription start site region 128114
Tssr128115 14 36935587 to 36935590 3 - TSS region transcription start site region 128115
Tssr128116 14 36935615 to 36935618 3 - TSS region transcription start site region 128116
Cpgi6344 14 36968220 to 36969141 921 CpG island CpG island 6344
Tssr128117 14 36968679 to 36968738 59 - TSS region transcription start site region 128117
Tssr128118 14 36968747 to 36968766 19 - TSS region transcription start site region 128118
Tssr128119 14 36968769 to 36968793 24 - TSS region transcription start site region 128119
Tssr125108 14 36968864 to 36968882 18 + TSS region transcription start site region 125108
Gm31131 14 36968871 to 36984705 15834 + lncRNA gene predicted gene, 31131
Tssr125109 14 36970005 to 36970016 11 + TSS region transcription start site region 125109
Tssr125110 14 36970020 to 36970030 10 + TSS region transcription start site region 125110
Tssr125111 14 36970041 to 36970050 9 + TSS region transcription start site region 125111
Tssr125112 14 36970101 to 36970112 11 + TSS region transcription start site region 125112
Gm47885 14 37023959 to 37024534 575 - pseudogene predicted gene, 47885
Rgr 14 37034909 to 37048964 14055 - protein coding gene retinal G protein coupled receptor
Tssr128120 14 37048957 to 37048970 13 - TSS region transcription start site region 128120
Tssr4375 14 37049023 to 37049028 5 - TSS region transcription start site region 4375
Tssr125113 14 37054818 to 37054853 35 + TSS region transcription start site region 125113
Lrit1 14 37054830 to 37064946 10116 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
Tssr125114 14 37054859 to 37054862 3 + TSS region transcription start site region 125114
Cpgi6345 14 37057326 to 37057572 246 CpG island CpG island 6345
Lrit2 14 37067991 to 37073743 5752 + protein coding gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
Tssr125115 14 37068013 to 37068024 11 + TSS region transcription start site region 125115
Tssr125116 14 37068042 to 37068054 12 + TSS region transcription start site region 125116
Tssr125117 14 37068057 to 37068064 7 + TSS region transcription start site region 125117
Cdhr1 14 37077849 to 37098311 20462 - protein coding gene cadherin-related family member 1
Cpgi6346 14 37098005 to 37098501 496 CpG island CpG island 6346
Tssr128121 14 37098211 to 37098280 69 - TSS region transcription start site region 128121
Tssr128122 14 37098348 to 37098363 15 - TSS region transcription start site region 128122
2610528A11Rik 14 37102140 to 37110101 7961 - protein coding gene RIKEN cDNA 2610528A11 gene
Tssr128123 14 37102238 to 37102250 12 - TSS region transcription start site region 128123
Tssr128124 14 37110025 to 37110061 36 - TSS region transcription start site region 128124
Tssr128125 14 37110065 to 37110077 12 - TSS region transcription start site region 128125
Tssr128126 14 37110087 to 37110106 19 - TSS region transcription start site region 128126
Tssr128127 14 37114012 to 37114027 15 - TSS region transcription start site region 128127
Ghitm 14 37120444 to 37135322 14878 - protein coding gene growth hormone inducible transmembrane protein
Tssr128128 14 37121633 to 37121649 16 - TSS region transcription start site region 128128
Tssr128129 14 37125308 to 37125334 26 - TSS region transcription start site region 128129
Tssr4376 14 37131254 to 37131271 17 - TSS region transcription start site region 4376
Cpgi6347 14 37134683 to 37135659 976 CpG island CpG island 6347
Tssr128130 14 37135089 to 37135098 9 - TSS region transcription start site region 128130
Tssr128131 14 37135126 to 37135141 15 - TSS region transcription start site region 128131
Tssr128132 14 37135153 to 37135172 19 - TSS region transcription start site region 128132
Tssr128133 14 37135186 to 37135197 11 - TSS region transcription start site region 128133
Tssr128134 14 37135230 to 37135241 11 - TSS region transcription start site region 128134
Tssr128135 14 37135245 to 37135271 26 - TSS region transcription start site region 128135
Tssr128136 14 37135274 to 37135308 34 - TSS region transcription start site region 128136
Tssr128137 14 37135310 to 37135321 11 - TSS region transcription start site region 128137
Tssr125118 14 37135473 to 37135501 28 + TSS region transcription start site region 125118
Tssr128138 14 37136006 to 37136015 9 - TSS region transcription start site region 128138
D14Mit150 14 37155938 to 37156075 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 150
Gm18834 14 37182238 to 37183016 778 - pseudogene predicted gene, 18834
D14Mit3 14 37209474 to 37209701 227 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 3
Gm22469 14 37224869 to 37225001 132 + snoRNA gene predicted gene, 22469