Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:34597761-35048466

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opn4 14 34590618 to 34600142 9524 - protein coding gene opsin 4 (melanopsin)
Gm49012 14 34591092 to 34605700 14608 + antisense lncRNA gene predicted gene, 49012
Tssr128093 14 34600136 to 34600147 11 - TSS region transcription start site region 128093
Cpgi6337 14 34615097 to 34615312 215 CpG island CpG island 6337
Tssr128094 14 34620709 to 34620740 31 - TSS region transcription start site region 128094
Gm49024 14 34661707 to 34662704 997 + lincRNA gene predicted gene, 49024
Cpgi6338 14 34661850 to 34662473 623 CpG island CpG island 6338
Gm49025 14 34668031 to 34668339 308 - lincRNA gene predicted gene, 49025
5830448L01Rik 14 34672465 to 34673763 1298 - bidirectional promoter lncRNA gene RIKEN cDNA 5830448L01 gene
Cpgi6339 14 34673297 to 34674846 1549 CpG island CpG island 6339
Tssr128095 14 34673731 to 34673779 48 - TSS region transcription start site region 128095
Tssr125083 14 34673867 to 34673884 17 + TSS region transcription start site region 125083
Tssr125084 14 34673888 to 34673930 42 + TSS region transcription start site region 125084
Wapl 14 34673928 to 34747983 74055 + protein coding gene WAPL cohesin release factor
Tssr125085 14 34673948 to 34673965 17 + TSS region transcription start site region 125085
Tssr125086 14 34673996 to 34674014 18 + TSS region transcription start site region 125086
Tssr125087 14 34674054 to 34674065 11 + TSS region transcription start site region 125087
Tssr125088 14 34674152 to 34674205 53 + TSS region transcription start site region 125088
Tssr125089 14 34674206 to 34674232 26 + TSS region transcription start site region 125089
Tssr128096 14 34674255 to 34674286 31 - TSS region transcription start site region 128096
Tssr128097 14 34674640 to 34674674 34 - TSS region transcription start site region 128097
Tssr128098 14 34675085 to 34675097 12 - TSS region transcription start site region 128098
Tssr125090 14 34677075 to 34677090 15 + TSS region transcription start site region 125090
Tssr125091 14 34692530 to 34692543 13 + TSS region transcription start site region 125091
Tssr125092 14 34694287 to 34694310 23 + TSS region transcription start site region 125092
Tssr125093 14 34695001 to 34695013 12 + TSS region transcription start site region 125093
Tssr125094 14 34700728 to 34700736 8 + TSS region transcription start site region 125094
Tssr125095 14 34709868 to 34709872 4 + TSS region transcription start site region 125095
Tssr125096 14 34714925 to 34714935 10 + TSS region transcription start site region 125096
Tssr125097 14 34746836 to 34746841 5 + TSS region transcription start site region 125097
A930038B10Rik 14 34760195 to 34769371 9176 + lincRNA gene RIKEN cDNA A930038B10 gene
Gm49032 14 34768956 to 34770055 1099 - lincRNA gene predicted gene, 49032
Cpgi6340 14 34769039 to 34770096 1057 CpG island CpG island 6340
Gm30969 14 34774481 to 34778202 3721 + lncRNA gene predicted gene, 30969
Tssr125098 14 34774551 to 34774584 33 + TSS region transcription start site region 125098
Cpgi6341 14 34818864 to 34821460 2596 CpG island CpG island 6341
Tssr125099 14 34819811 to 34819834 23 + TSS region transcription start site region 125099
Tssr125100 14 34819840 to 34819856 16 + TSS region transcription start site region 125100
Tssr125101 14 34820095 to 34820153 58 + TSS region transcription start site region 125101
Grid1 14 34820108 to 35583379 763271 + protein coding gene glutamate receptor, ionotropic, delta 1
Cpgi6342 14 34822761 to 34823466 705 CpG island CpG island 6342
D14Mit79 14 34839292 to 34839459 167 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 79
Mir346 14 34894609 to 34894706 97 + miRNA gene microRNA 346
Cpgi6343 14 34896271 to 34896660 389 CpG island CpG island 6343
Tssr128099 14 34936106 to 34936109 3 - TSS region transcription start site region 128099