Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:34550618-34640142

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ldb3 14 34526603 to 34588682 62079 - protein coding gene LIM domain binding 3
Tssr128084 14 34552210 to 34552222 12 - TSS region transcription start site region 128084
Tssr128085 14 34555466 to 34555493 27 - TSS region transcription start site region 128085
Tssr128086 14 34561737 to 34561751 14 - TSS region transcription start site region 128086
Cpgi6334 14 34565778 to 34565934 156 CpG island CpG island 6334
Tssr128087 14 34567529 to 34567550 21 - TSS region transcription start site region 128087
Cpgi6335 14 34569527 to 34569980 453 CpG island CpG island 6335
Tssr128088 14 34578629 to 34578641 12 - TSS region transcription start site region 128088
Tssr128089 14 34588626 to 34588637 11 - TSS region transcription start site region 128089
Tssr128090 14 34588654 to 34588669 15 - TSS region transcription start site region 128090
Tssr128091 14 34588681 to 34588690 9 - TSS region transcription start site region 128091
Tssr128092 14 34590284 to 34590297 13 - TSS region transcription start site region 128092
Opn4 14 34590618 to 34600142 9524 - protein coding gene opsin 4 (melanopsin)
Cpgi6336 14 34590959 to 34591204 245 CpG island CpG island 6336
Gm49012 14 34591092 to 34605700 14608 + antisense lncRNA gene predicted gene, 49012
Tssr128093 14 34600136 to 34600147 11 - TSS region transcription start site region 128093
Cpgi6337 14 34615097 to 34615312 215 CpG island CpG island 6337
Tssr128094 14 34620709 to 34620740 31 - TSS region transcription start site region 128094