Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:34534054-34814065

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ldb3 14 34526603 to 34588682 62079 - protein coding gene LIM domain binding 3
Tssr128083 14 34541960 to 34541995 35 - TSS region transcription start site region 128083
Cpgi6333 14 34548589 to 34549706 1117 CpG island CpG island 6333
Tssr128084 14 34552210 to 34552222 12 - TSS region transcription start site region 128084
Tssr128085 14 34555466 to 34555493 27 - TSS region transcription start site region 128085
Tssr128086 14 34561737 to 34561751 14 - TSS region transcription start site region 128086
Cpgi6334 14 34565778 to 34565934 156 CpG island CpG island 6334
Tssr128087 14 34567529 to 34567550 21 - TSS region transcription start site region 128087
Cpgi6335 14 34569527 to 34569980 453 CpG island CpG island 6335
Tssr128088 14 34578629 to 34578641 12 - TSS region transcription start site region 128088
Tssr128089 14 34588626 to 34588637 11 - TSS region transcription start site region 128089
Tssr128090 14 34588654 to 34588669 15 - TSS region transcription start site region 128090
Tssr128091 14 34588681 to 34588690 9 - TSS region transcription start site region 128091
Tssr128092 14 34590284 to 34590297 13 - TSS region transcription start site region 128092
Opn4 14 34590618 to 34600142 9524 - protein coding gene opsin 4 (melanopsin)
Cpgi6336 14 34590959 to 34591204 245 CpG island CpG island 6336
Gm49012 14 34591092 to 34605700 14608 + antisense lncRNA gene predicted gene, 49012
Tssr128093 14 34600136 to 34600147 11 - TSS region transcription start site region 128093
Cpgi6337 14 34615097 to 34615312 215 CpG island CpG island 6337
Tssr128094 14 34620709 to 34620740 31 - TSS region transcription start site region 128094
Gm49024 14 34661707 to 34662704 997 + lincRNA gene predicted gene, 49024
Cpgi6338 14 34661850 to 34662473 623 CpG island CpG island 6338
Gm49025 14 34668031 to 34668339 308 - lincRNA gene predicted gene, 49025
5830448L01Rik 14 34672465 to 34673763 1298 - bidirectional promoter lncRNA gene RIKEN cDNA 5830448L01 gene
Cpgi6339 14 34673297 to 34674846 1549 CpG island CpG island 6339
Tssr128095 14 34673731 to 34673779 48 - TSS region transcription start site region 128095
Tssr125083 14 34673867 to 34673884 17 + TSS region transcription start site region 125083
Tssr125084 14 34673888 to 34673930 42 + TSS region transcription start site region 125084
Wapl 14 34673928 to 34747983 74055 + protein coding gene WAPL cohesin release factor
Tssr125085 14 34673948 to 34673965 17 + TSS region transcription start site region 125085
Tssr125086 14 34673996 to 34674014 18 + TSS region transcription start site region 125086
Tssr125087 14 34674054 to 34674065 11 + TSS region transcription start site region 125087
Tssr125088 14 34674152 to 34674205 53 + TSS region transcription start site region 125088
Tssr125089 14 34674206 to 34674232 26 + TSS region transcription start site region 125089
Tssr128096 14 34674255 to 34674286 31 - TSS region transcription start site region 128096
Tssr128097 14 34674640 to 34674674 34 - TSS region transcription start site region 128097
Tssr128098 14 34675085 to 34675097 12 - TSS region transcription start site region 128098
Tssr125090 14 34677075 to 34677090 15 + TSS region transcription start site region 125090
Tssr125091 14 34692530 to 34692543 13 + TSS region transcription start site region 125091
Tssr125092 14 34694287 to 34694310 23 + TSS region transcription start site region 125092
Tssr125093 14 34695001 to 34695013 12 + TSS region transcription start site region 125093
Tssr125094 14 34700728 to 34700736 8 + TSS region transcription start site region 125094
Tssr125095 14 34709868 to 34709872 4 + TSS region transcription start site region 125095
Tssr125096 14 34714925 to 34714935 10 + TSS region transcription start site region 125096
Tssr125097 14 34746836 to 34746841 5 + TSS region transcription start site region 125097
A930038B10Rik 14 34760195 to 34769371 9176 + lincRNA gene RIKEN cDNA A930038B10 gene
Gm49032 14 34768956 to 34770055 1099 - lincRNA gene predicted gene, 49032
Cpgi6340 14 34769039 to 34770096 1057 CpG island CpG island 6340
Gm30969 14 34774481 to 34778202 3721 + lncRNA gene predicted gene, 30969
Tssr125098 14 34774551 to 34774584 33 + TSS region transcription start site region 125098