Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:33960355-34660383

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132 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbp3 14 33954022 to 33964216 10194 + protein coding gene retinol binding protein 3, interstitial
Zfp488 14 33967070 to 33978764 11694 - protein coding gene zinc finger protein 488
Cpgi6324 14 33978568 to 33978959 391 CpG island CpG island 6324
Tssr128042 14 33978751 to 33978791 40 - TSS region transcription start site region 128042
Tssr128043 14 33978801 to 33978812 11 - TSS region transcription start site region 128043
Gm30083 14 33988417 to 34015182 26765 - protein coding gene predicted gene, 30083
Tssr128044 14 34015175 to 34015187 12 - TSS region transcription start site region 128044
Tssr128045 14 34015188 to 34015204 16 - TSS region transcription start site region 128045
Gm5460 14 34016285 to 34047114 30829 + protein coding gene predicted gene 5460
Tssr125056 14 34017038 to 34017051 13 + TSS region transcription start site region 125056
Tssr125057 14 34017056 to 34017067 11 + TSS region transcription start site region 125057
Tssr125058 14 34017074 to 34017089 15 + TSS region transcription start site region 125058
A630023A22Rik 14 34051126 to 34102754 51628 - protein coding gene RIKEN cDNA A630023A22 gene
Tssr125059 14 34052683 to 34052730 47 + TSS region transcription start site region 125059
Antxrl 14 34052712 to 34076323 23611 + protein coding gene anthrax toxin receptor-like
Tssr125060 14 34052737 to 34052748 11 + TSS region transcription start site region 125060
Tssr125061 14 34053158 to 34053176 18 + TSS region transcription start site region 125061
Tssr125062 14 34053466 to 34053473 7 + TSS region transcription start site region 125062
Gm49129 14 34084753 to 34085085 332 + pseudogene predicted gene, 49129
Tssr125063 14 34085978 to 34086004 26 + TSS region transcription start site region 125063
Anxa8 14 34085981 to 34100571 14590 + protein coding gene annexin A8
Tssr125064 14 34086008 to 34086026 18 + TSS region transcription start site region 125064
Tssr125065 14 34091807 to 34091814 7 + TSS region transcription start site region 125065
Tssr125066 14 34092530 to 34092532 2 + TSS region transcription start site region 125066
Tssr128046 14 34102663 to 34102668 5 - TSS region transcription start site region 128046
Tssr128047 14 34102692 to 34102709 17 - TSS region transcription start site region 128047
Gm24998 14 34106156 to 34106244 88 + snoRNA gene predicted gene, 24998
Tssr128048 14 34117752 to 34117789 37 - TSS region transcription start site region 128048
Gm30556 14 34119596 to 34120861 1265 + lincRNA gene predicted gene, 30556
Gm7778 14 34139448 to 34139815 367 + pseudogene predicted gene 7778
Npy4r 14 34145646 to 34152419 6773 - protein coding gene neuropeptide Y receptor Y4
Cpgi6325 14 34152455 to 34152670 215 CpG island CpG island 6325
Tssr128049 14 34152473 to 34152486 13 - TSS region transcription start site region 128049
Tssr125067 14 34170640 to 34170641 1 + TSS region transcription start site region 125067
Rpl23a-ps3 14 34170655 to 34171122 467 + pseudogene ribosomal protein L23A, pseudogene 3
Gm18884 14 34175759 to 34176309 550 - pseudogene predicted gene, 18884
Gprin2 14 34185688 to 34201653 15965 - protein coding gene G protein regulated inducer of neurite outgrowth 2
Cpgi6326 14 34201116 to 34201885 769 CpG island CpG island 6326
Tssr128050 14 34201582 to 34201602 20 - TSS region transcription start site region 128050
Tssr128051 14 34201604 to 34201622 18 - TSS region transcription start site region 128051
Tssr128052 14 34201650 to 34201663 13 - TSS region transcription start site region 128052
Gm49168 14 34218076 to 34218385 309 + pseudogene predicted gene, 49168
Tssr125068 14 34218209 to 34218241 32 + TSS region transcription start site region 125068
Cpgi6327 14 34219769 to 34220231 462 CpG island CpG island 6327
Syt15 14 34219921 to 34230421 10500 + protein coding gene synaptotagmin XV
Tssr125069 14 34220028 to 34220058 30 + TSS region transcription start site region 125069
Gm49201 14 34230619 to 34231728 1109 - lincRNA gene predicted gene, 49201
Shld2 14 34237033 to 34310493 73460 - protein coding gene shieldin complex subunit 2
Tssr128053 14 34252574 to 34252581 7 - TSS region transcription start site region 128053
Gm18813 14 34260332 to 34261683 1351 + pseudogene predicted gene, 18813
Gm49203 14 34263123 to 34263536 413 + pseudogene predicted gene, 49203
Tssr128054 14 34274230 to 34274249 19 - TSS region transcription start site region 128054
Tssr128055 14 34274277 to 34274294 17 - TSS region transcription start site region 128055
Tssr128056 14 34275345 to 34275348 3 - TSS region transcription start site region 128056
Gm49202 14 34280843 to 34281179 336 + pseudogene predicted gene, 49202
Tssr125070 14 34307933 to 34307941 8 + TSS region transcription start site region 125070
Cpgi6328 14 34309954 to 34311528 1574 CpG island CpG island 6328
Tssr128057 14 34310355 to 34310383 28 - TSS region transcription start site region 128057
Tssr128058 14 34310388 to 34310400 12 - TSS region transcription start site region 128058
Tssr128059 14 34310539 to 34310560 21 - TSS region transcription start site region 128059
Tssr128060 14 34310563 to 34310585 22 - TSS region transcription start site region 128060
Glud1 14 34310727 to 34345033 34306 + protein coding gene glutamate dehydrogenase 1
Cons5 14 34310727 to 34345033 34306 QTL consumption-saccharin intake 5
Tssr125071 14 34310766 to 34310778 12 + TSS region transcription start site region 125071
Tssr125072 14 34310798 to 34310809 11 + TSS region transcription start site region 125072
Tssr125073 14 34310816 to 34310830 14 + TSS region transcription start site region 125073
Tssr125074 14 34311258 to 34311272 14 + TSS region transcription start site region 125074
Tssr125075 14 34319876 to 34319888 12 + TSS region transcription start site region 125075
Gm3219 14 34345281 to 34345583 302 + pseudogene predicted pseudogene 3219
Fam25c 14 34351882 to 34355393 3511 - protein coding gene family with sequence similarity 25, member C
Tssr128061 14 34355383 to 34355401 18 - TSS region transcription start site region 128061
D14Mit45 14 34357246 to 34357347 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 45
Tssr128062 14 34358255 to 34358264 9 - TSS region transcription start site region 128062
Tssr128063 14 34359046 to 34359068 22 - TSS region transcription start site region 128063
Tssr128064 14 34362297 to 34362320 23 - TSS region transcription start site region 128064
Tssr128065 14 34362361 to 34362377 16 - TSS region transcription start site region 128065
Tssr128066 14 34363228 to 34363248 20 - TSS region transcription start site region 128066
Cpgi6329 14 34363550 to 34364134 584 CpG island CpG island 6329
Gm41131 14 34365127 to 34367571 2444 + lncRNA gene predicted gene, 41131
Sncg 14 34370274 to 34374669 4395 - protein coding gene synuclein, gamma
Tssr128067 14 34374617 to 34374690 73 - TSS region transcription start site region 128067
Tssr125076 14 34375488 to 34375499 11 + TSS region transcription start site region 125076
Mmrn2 14 34375504 to 34404287 28783 + protein coding gene multimerin 2
Tssr125077 14 34375517 to 34375582 65 + TSS region transcription start site region 125077
Tssr125078 14 34376431 to 34376470 39 + TSS region transcription start site region 125078
Tssr128068 14 34378571 to 34378582 11 - TSS region transcription start site region 128068
Tssr125079 14 34378764 to 34378779 15 + TSS region transcription start site region 125079
Tssr125080 14 34378782 to 34378795 13 + TSS region transcription start site region 125080
Tssr125081 14 34378838 to 34378852 14 + TSS region transcription start site region 125081
Tssr128069 14 34379182 to 34379230 48 - TSS region transcription start site region 128069
Cpgi6330 14 34398775 to 34399068 293 CpG island CpG island 6330
Tssr128070 14 34403741 to 34403745 4 - TSS region transcription start site region 128070
Bmpr1a 14 34411068 to 34503461 92393 - protein coding gene bone morphogenetic protein receptor, type 1A
Tssr128071 14 34417287 to 34417293 6 - TSS region transcription start site region 128071
D14Mit189 14 34418566 to 34418667 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 189
Tssr128072 14 34422714 to 34422724 10 - TSS region transcription start site region 128072
Tssr128073 14 34422751 to 34422754 3 - TSS region transcription start site region 128073
Gm17110 14 34501715 to 34502684 969 + antisense lncRNA gene predicted gene 17110
Cpgi6331 14 34501773 to 34503449 1676 CpG island CpG island 6331
Tssr125082 14 34501943 to 34501962 19 + TSS region transcription start site region 125082
Tssr128074 14 34502522 to 34502574 52 - TSS region transcription start site region 128074
Tssr128075 14 34502634 to 34502657 23 - TSS region transcription start site region 128075
Tssr128076 14 34502663 to 34502715 52 - TSS region transcription start site region 128076
Tssr128077 14 34503224 to 34503231 7 - TSS region transcription start site region 128077
Tssr128078 14 34503240 to 34503250 10 - TSS region transcription start site region 128078
Tssr128079 14 34503254 to 34503281 27 - TSS region transcription start site region 128079
Tssr128080 14 34503294 to 34503318 24 - TSS region transcription start site region 128080
Tssr128081 14 34503323 to 34503345 22 - TSS region transcription start site region 128081
Tssr128082 14 34503352 to 34503371 19 - TSS region transcription start site region 128082
9230112D13Rik 14 34511621 to 34522801 11180 - protein coding gene RIKEN cDNA 9230112D13 gene
Gm48953 14 34516195 to 34516676 481 + pseudogene predicted gene, 48953
Cpgi6332 14 34523455 to 34523687 232 CpG island CpG island 6332
Ldb3 14 34526603 to 34588682 62079 - protein coding gene LIM domain binding 3
Tssr128083 14 34541960 to 34541995 35 - TSS region transcription start site region 128083
Cpgi6333 14 34548589 to 34549706 1117 CpG island CpG island 6333
Tssr128084 14 34552210 to 34552222 12 - TSS region transcription start site region 128084
Tssr128085 14 34555466 to 34555493 27 - TSS region transcription start site region 128085
Tssr128086 14 34561737 to 34561751 14 - TSS region transcription start site region 128086
Cpgi6334 14 34565778 to 34565934 156 CpG island CpG island 6334
Tssr128087 14 34567529 to 34567550 21 - TSS region transcription start site region 128087
Cpgi6335 14 34569527 to 34569980 453 CpG island CpG island 6335
Tssr128088 14 34578629 to 34578641 12 - TSS region transcription start site region 128088
Tssr128089 14 34588626 to 34588637 11 - TSS region transcription start site region 128089
Tssr128090 14 34588654 to 34588669 15 - TSS region transcription start site region 128090
Tssr128091 14 34588681 to 34588690 9 - TSS region transcription start site region 128091
Tssr128092 14 34590284 to 34590297 13 - TSS region transcription start site region 128092
Opn4 14 34590618 to 34600142 9524 - protein coding gene opsin 4 (melanopsin)
Cpgi6336 14 34590959 to 34591204 245 CpG island CpG island 6336
Gm49012 14 34591092 to 34605700 14608 + antisense lncRNA gene predicted gene, 49012
Tssr128093 14 34600136 to 34600147 11 - TSS region transcription start site region 128093
Cpgi6337 14 34615097 to 34615312 215 CpG island CpG island 6337
Tssr128094 14 34620709 to 34620740 31 - TSS region transcription start site region 128094