Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:33951582-34451602

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125053 14 33953977 to 33954016 39 + TSS region transcription start site region 125053
Tssr125054 14 33954020 to 33954031 11 + TSS region transcription start site region 125054
Rbp3 14 33954022 to 33964216 10194 + protein coding gene retinol binding protein 3, interstitial
Tssr125055 14 33954040 to 33954059 19 + TSS region transcription start site region 125055
Cpgi6322 14 33954675 to 33954872 197 CpG island CpG island 6322
Cpgi6323 14 33955362 to 33956337 975 CpG island CpG island 6323
Zfp488 14 33967070 to 33978764 11694 - protein coding gene zinc finger protein 488
Cpgi6324 14 33978568 to 33978959 391 CpG island CpG island 6324
Tssr128042 14 33978751 to 33978791 40 - TSS region transcription start site region 128042
Tssr128043 14 33978801 to 33978812 11 - TSS region transcription start site region 128043
Gm30083 14 33988417 to 34015182 26765 - protein coding gene predicted gene, 30083
Tssr128044 14 34015175 to 34015187 12 - TSS region transcription start site region 128044
Tssr128045 14 34015188 to 34015204 16 - TSS region transcription start site region 128045
Gm5460 14 34016285 to 34047114 30829 + protein coding gene predicted gene 5460
Tssr125056 14 34017038 to 34017051 13 + TSS region transcription start site region 125056
Tssr125057 14 34017056 to 34017067 11 + TSS region transcription start site region 125057
Tssr125058 14 34017074 to 34017089 15 + TSS region transcription start site region 125058
A630023A22Rik 14 34051126 to 34102754 51628 - protein coding gene RIKEN cDNA A630023A22 gene
Tssr125059 14 34052683 to 34052730 47 + TSS region transcription start site region 125059
Antxrl 14 34052712 to 34076323 23611 + protein coding gene anthrax toxin receptor-like
Tssr125060 14 34052737 to 34052748 11 + TSS region transcription start site region 125060
Tssr125061 14 34053158 to 34053176 18 + TSS region transcription start site region 125061
Tssr125062 14 34053466 to 34053473 7 + TSS region transcription start site region 125062
Gm49129 14 34084753 to 34085085 332 + pseudogene predicted gene, 49129
Tssr125063 14 34085978 to 34086004 26 + TSS region transcription start site region 125063
Anxa8 14 34085981 to 34100571 14590 + protein coding gene annexin A8
Tssr125064 14 34086008 to 34086026 18 + TSS region transcription start site region 125064
Tssr125065 14 34091807 to 34091814 7 + TSS region transcription start site region 125065
Tssr125066 14 34092530 to 34092532 2 + TSS region transcription start site region 125066
Tssr128046 14 34102663 to 34102668 5 - TSS region transcription start site region 128046
Tssr128047 14 34102692 to 34102709 17 - TSS region transcription start site region 128047
Gm24998 14 34106156 to 34106244 88 + snoRNA gene predicted gene, 24998
Tssr128048 14 34117752 to 34117789 37 - TSS region transcription start site region 128048
Gm30556 14 34119596 to 34120861 1265 + lincRNA gene predicted gene, 30556
Gm7778 14 34139448 to 34139815 367 + pseudogene predicted gene 7778
Npy4r 14 34145646 to 34152419 6773 - protein coding gene neuropeptide Y receptor Y4
Cpgi6325 14 34152455 to 34152670 215 CpG island CpG island 6325
Tssr128049 14 34152473 to 34152486 13 - TSS region transcription start site region 128049
Tssr125067 14 34170640 to 34170641 1 + TSS region transcription start site region 125067
Rpl23a-ps3 14 34170655 to 34171122 467 + pseudogene ribosomal protein L23A, pseudogene 3
Gm18884 14 34175759 to 34176309 550 - pseudogene predicted gene, 18884
Gprin2 14 34185688 to 34201653 15965 - protein coding gene G protein regulated inducer of neurite outgrowth 2
Cpgi6326 14 34201116 to 34201885 769 CpG island CpG island 6326
Tssr128050 14 34201582 to 34201602 20 - TSS region transcription start site region 128050
Tssr128051 14 34201604 to 34201622 18 - TSS region transcription start site region 128051
Tssr128052 14 34201650 to 34201663 13 - TSS region transcription start site region 128052
Gm49168 14 34218076 to 34218385 309 + pseudogene predicted gene, 49168
Tssr125068 14 34218209 to 34218241 32 + TSS region transcription start site region 125068
Cpgi6327 14 34219769 to 34220231 462 CpG island CpG island 6327
Syt15 14 34219921 to 34230421 10500 + protein coding gene synaptotagmin XV
Tssr125069 14 34220028 to 34220058 30 + TSS region transcription start site region 125069
Gm49201 14 34230619 to 34231728 1109 - lincRNA gene predicted gene, 49201
Shld2 14 34237033 to 34310493 73460 - protein coding gene shieldin complex subunit 2
Tssr128053 14 34252574 to 34252581 7 - TSS region transcription start site region 128053
Gm18813 14 34260332 to 34261683 1351 + pseudogene predicted gene, 18813
Gm49203 14 34263123 to 34263536 413 + pseudogene predicted gene, 49203
Tssr128054 14 34274230 to 34274249 19 - TSS region transcription start site region 128054
Tssr128055 14 34274277 to 34274294 17 - TSS region transcription start site region 128055
Tssr128056 14 34275345 to 34275348 3 - TSS region transcription start site region 128056
Gm49202 14 34280843 to 34281179 336 + pseudogene predicted gene, 49202
Tssr125070 14 34307933 to 34307941 8 + TSS region transcription start site region 125070
Cpgi6328 14 34309954 to 34311528 1574 CpG island CpG island 6328
Tssr128057 14 34310355 to 34310383 28 - TSS region transcription start site region 128057
Tssr128058 14 34310388 to 34310400 12 - TSS region transcription start site region 128058
Tssr128059 14 34310539 to 34310560 21 - TSS region transcription start site region 128059
Tssr128060 14 34310563 to 34310585 22 - TSS region transcription start site region 128060
Cons5 14 34310727 to 34345033 34306 QTL consumption-saccharin intake 5
Glud1 14 34310727 to 34345033 34306 + protein coding gene glutamate dehydrogenase 1
Tssr125071 14 34310766 to 34310778 12 + TSS region transcription start site region 125071
Tssr125072 14 34310798 to 34310809 11 + TSS region transcription start site region 125072
Tssr125073 14 34310816 to 34310830 14 + TSS region transcription start site region 125073
Tssr125074 14 34311258 to 34311272 14 + TSS region transcription start site region 125074
Tssr125075 14 34319876 to 34319888 12 + TSS region transcription start site region 125075
Gm3219 14 34345281 to 34345583 302 + pseudogene predicted pseudogene 3219
Fam25c 14 34351882 to 34355393 3511 - protein coding gene family with sequence similarity 25, member C
Tssr128061 14 34355383 to 34355401 18 - TSS region transcription start site region 128061
D14Mit45 14 34357246 to 34357347 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 45
Tssr128062 14 34358255 to 34358264 9 - TSS region transcription start site region 128062
Tssr128063 14 34359046 to 34359068 22 - TSS region transcription start site region 128063
Tssr128064 14 34362297 to 34362320 23 - TSS region transcription start site region 128064
Tssr128065 14 34362361 to 34362377 16 - TSS region transcription start site region 128065
Tssr128066 14 34363228 to 34363248 20 - TSS region transcription start site region 128066
Cpgi6329 14 34363550 to 34364134 584 CpG island CpG island 6329
Gm41131 14 34365127 to 34367571 2444 + lncRNA gene predicted gene, 41131
Sncg 14 34370274 to 34374669 4395 - protein coding gene synuclein, gamma
Tssr128067 14 34374617 to 34374690 73 - TSS region transcription start site region 128067
Tssr125076 14 34375488 to 34375499 11 + TSS region transcription start site region 125076
Mmrn2 14 34375504 to 34404287 28783 + protein coding gene multimerin 2
Tssr125077 14 34375517 to 34375582 65 + TSS region transcription start site region 125077
Tssr125078 14 34376431 to 34376470 39 + TSS region transcription start site region 125078
Tssr128068 14 34378571 to 34378582 11 - TSS region transcription start site region 128068
Tssr125079 14 34378764 to 34378779 15 + TSS region transcription start site region 125079
Tssr125080 14 34378782 to 34378795 13 + TSS region transcription start site region 125080
Tssr125081 14 34378838 to 34378852 14 + TSS region transcription start site region 125081
Tssr128069 14 34379182 to 34379230 48 - TSS region transcription start site region 128069
Cpgi6330 14 34398775 to 34399068 293 CpG island CpG island 6330
Tssr128070 14 34403741 to 34403745 4 - TSS region transcription start site region 128070
Bmpr1a 14 34411068 to 34503461 92393 - protein coding gene bone morphogenetic protein receptor, type 1A
Tssr128071 14 34417287 to 34417293 6 - TSS region transcription start site region 128071
D14Mit189 14 34418566 to 34418667 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 189
Tssr128072 14 34422714 to 34422724 10 - TSS region transcription start site region 128072
Tssr128073 14 34422751 to 34422754 3 - TSS region transcription start site region 128073