Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:33289495-33999601

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap22 14 33214026 to 33369934 155908 + protein coding gene Rho GTPase activating protein 22
Tssr125022 14 33294046 to 33294050 4 + TSS region transcription start site region 125022
Tssr125023 14 33312769 to 33312773 4 + TSS region transcription start site region 125023
Tssr125024 14 33317049 to 33317060 11 + TSS region transcription start site region 125024
Tssr125025 14 33317134 to 33317157 23 + TSS region transcription start site region 125025
Tssr125026 14 33317310 to 33317321 11 + TSS region transcription start site region 125026
Cpgi6316 14 33319382 to 33320626 1244 CpG island CpG island 6316
Tssr125027 14 33319741 to 33319744 3 + TSS region transcription start site region 125027
Tssr125028 14 33337406 to 33337415 9 + TSS region transcription start site region 125028
Tssr125029 14 33337435 to 33337443 8 + TSS region transcription start site region 125029
Tssr125030 14 33345612 to 33345636 24 + TSS region transcription start site region 125030
Cpgi6317 14 33350923 to 33351851 928 CpG island CpG island 6317
Tssr125031 14 33351292 to 33351312 20 + TSS region transcription start site region 125031
Tssr125032 14 33351314 to 33351349 35 + TSS region transcription start site region 125032
Gm15512 14 33365951 to 33370143 4192 - antisense lncRNA gene predicted gene 15512
Tssr128033 14 33370137 to 33370147 10 - TSS region transcription start site region 128033
Tssr128034 14 33371271 to 33371272 1 - TSS region transcription start site region 128034
Mapk8 14 33377898 to 33447158 69260 - protein coding gene mitogen-activated protein kinase 8
Tssr128035 14 33382137 to 33382145 8 - TSS region transcription start site region 128035
Tssr128036 14 33382832 to 33382836 4 - TSS region transcription start site region 128036
6030458A19Rik 14 33421245 to 33422282 1037 unclassified gene RIKEN cDNA 6030458A19 gene
Gm49037 14 33428642 to 33429025 383 - pseudogene predicted gene, 49037
Gm46448 14 33432133 to 33432940 807 + pseudogene predicted gene, 46448
Cpgi6318 14 33446485 to 33447681 1196 CpG island CpG island 6318
Tssr128037 14 33447120 to 33447133 13 - TSS region transcription start site region 128037
Tssr128038 14 33447142 to 33447179 37 - TSS region transcription start site region 128038
Tssr128039 14 33447184 to 33447200 16 - TSS region transcription start site region 128039
Tssr125033 14 33471532 to 33471540 8 + TSS region transcription start site region 125033
Tssr125034 14 33471565 to 33471582 17 + TSS region transcription start site region 125034
Tssr125035 14 33471583 to 33471593 10 + TSS region transcription start site region 125035
Frmpd2 14 33483501 to 33575269 91768 + protein coding gene FERM and PDZ domain containing 2
Tssr4370 14 33510929 to 33510932 3 - TSS region transcription start site region 4370
Cpgi6319 14 33589108 to 33589271 163 CpG island CpG island 6319
Ptpn20 14 33589207 to 33640754 51547 + protein coding gene protein tyrosine phosphatase, non-receptor type 20
Tssr125036 14 33589223 to 33589230 7 + TSS region transcription start site region 125036
Tssr125037 14 33589238 to 33589267 29 + TSS region transcription start site region 125037
Tssr125038 14 33590827 to 33590831 4 + TSS region transcription start site region 125038
Tssr128040 14 33609915 to 33609917 2 - TSS region transcription start site region 128040
Gm26228 14 33644495 to 33644601 106 + snRNA gene predicted gene, 26228
Tssr128041 14 33646338 to 33646345 7 - TSS region transcription start site region 128041
D14Mit15 14 33684360 to 33684510 150 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 15
Gm49108 14 33804266 to 33807041 2775 - lincRNA gene predicted gene, 49108
4930503F20Rik 14 33808075 to 33811283 3208 - lincRNA gene RIKEN cDNA 4930503F20 gene
Tssr4371 14 33890336 to 33890338 2 + TSS region transcription start site region 4371
Gm30031 14 33912524 to 33923149 10625 - lncRNA gene predicted gene, 30031
Cpgi6320 14 33923126 to 33924283 1157 CpG island CpG island 6320
Tssr125039 14 33923315 to 33923329 14 + TSS region transcription start site region 125039
Tssr125040 14 33923330 to 33923353 23 + TSS region transcription start site region 125040
Tssr125041 14 33923355 to 33923364 9 + TSS region transcription start site region 125041
Tssr125042 14 33923428 to 33923466 38 + TSS region transcription start site region 125042
Tssr125043 14 33923483 to 33923499 16 + TSS region transcription start site region 125043
Tssr125044 14 33923582 to 33923602 20 + TSS region transcription start site region 125044
Gdf10 14 33923587 to 33935285 11698 + protein coding gene growth differentiation factor 10
Tssr125045 14 33923610 to 33923637 27 + TSS region transcription start site region 125045
Tssr125046 14 33923643 to 33923685 42 + TSS region transcription start site region 125046
Tssr125047 14 33923689 to 33923700 11 + TSS region transcription start site region 125047
Tssr125048 14 33923800 to 33923812 12 + TSS region transcription start site region 125048
Cpgi6321 14 33931923 to 33932618 695 CpG island CpG island 6321
Tssr125049 14 33934866 to 33934879 13 + TSS region transcription start site region 125049
Tssr125050 14 33940971 to 33940982 11 + TSS region transcription start site region 125050
Tssr125051 14 33941021 to 33941052 31 + TSS region transcription start site region 125051
Gdf2 14 33941039 to 33947198 6159 + protein coding gene growth differentiation factor 2
Tssr125052 14 33941072 to 33941084 12 + TSS region transcription start site region 125052
Tssr125053 14 33953977 to 33954016 39 + TSS region transcription start site region 125053
Tssr125054 14 33954020 to 33954031 11 + TSS region transcription start site region 125054
Rbp3 14 33954022 to 33964216 10194 + protein coding gene retinol binding protein 3, interstitial
Tssr125055 14 33954040 to 33954059 19 + TSS region transcription start site region 125055
Cpgi6322 14 33954675 to 33954872 197 CpG island CpG island 6322
Cpgi6323 14 33955362 to 33956337 975 CpG island CpG island 6323
Zfp488 14 33967070 to 33978764 11694 - protein coding gene zinc finger protein 488
Cpgi6324 14 33978568 to 33978959 391 CpG island CpG island 6324
Tssr128042 14 33978751 to 33978791 40 - TSS region transcription start site region 128042
Tssr128043 14 33978801 to 33978812 11 - TSS region transcription start site region 128043
Gm30083 14 33988417 to 34015182 26765 - protein coding gene predicted gene, 30083