Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:32600275-33650279

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
twit 14 31646980 to 33256349 1609369 heritable phenotypic marker twitter
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020
Gm36611 14 32752776 to 32770301 17525 - lncRNA gene predicted gene, 36611
Tssr124993 14 32771556 to 32771557 1 + TSS region transcription start site region 124993
Tmem273 14 32785963 to 32817984 32021 + protein coding gene transmembrane protein 273
Tssr124994 14 32786004 to 32786023 19 + TSS region transcription start site region 124994
Cpgi6309 14 32786800 to 32787200 400 CpG island CpG island 6309
Tssr124995 14 32811751 to 32811759 8 + TSS region transcription start site region 124995
Tssr124996 14 32833955 to 32833966 11 + TSS region transcription start site region 124996
Fam170b 14 32833962 to 32836789 2827 + protein coding gene family with sequence similarity 170, member B
Tssr124997 14 32833968 to 32834003 35 + TSS region transcription start site region 124997
Cpgi6310 14 32835501 to 32835848 347 CpG island CpG island 6310
Gm41129 14 32839273 to 32856669 17396 - lncRNA gene predicted gene, 41129
Cpgi6311 14 32856468 to 32857414 946 CpG island CpG island 6311
Vstm4 14 32856756 to 32939489 82733 + protein coding gene V-set and transmembrane domain containing 4
Tssr124998 14 32856782 to 32856808 26 + TSS region transcription start site region 124998
Tssr124999 14 32856817 to 32856830 13 + TSS region transcription start site region 124999
Tssr125000 14 32856856 to 32856895 39 + TSS region transcription start site region 125000
Tssr125001 14 32856897 to 32856916 19 + TSS region transcription start site region 125001
8030431A06Rik 14 32864650 to 32865679 1029 unclassified non-coding RNA gene RIKEN cDNA 8030431A06 gene
Tssr125002 14 32878375 to 32878386 11 + TSS region transcription start site region 125002
Gm7734 14 32897719 to 32898729 1010 + pseudogene predicted gene 7734
Gm36674 14 32904622 to 32915350 10728 - lncRNA gene predicted gene, 36674
Wdfy4 14 32959547 to 33185508 225961 - protein coding gene WD repeat and FYVE domain containing 4
Tssr125003 14 32991379 to 32991390 11 + TSS region transcription start site region 125003
Lrrc18 14 32991382 to 33015291 23909 + protein coding gene leucine rich repeat containing 18
Tssr125004 14 32991392 to 32991403 11 + TSS region transcription start site region 125004
Tssr125005 14 32991412 to 32991423 11 + TSS region transcription start site region 125005
Tssr125006 14 32991430 to 32991454 24 + TSS region transcription start site region 125006
D14Mit100 14 33008036 to 33008231 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 100
Tssr128021 14 33112250 to 33112262 12 - TSS region transcription start site region 128021
Tssr128022 14 33125275 to 33125279 4 - TSS region transcription start site region 128022
Tssr128023 14 33162954 to 33162967 13 - TSS region transcription start site region 128023
Tssr128024 14 33185080 to 33185100 20 - TSS region transcription start site region 128024
Tssr128025 14 33185115 to 33185131 16 - TSS region transcription start site region 128025
Tssr128026 14 33185139 to 33185166 27 - TSS region transcription start site region 128026
Tssr128027 14 33185174 to 33185188 14 - TSS region transcription start site region 128027
Tssr128028 14 33185489 to 33185557 68 - TSS region transcription start site region 128028
Cpgi6312 14 33189927 to 33190191 264 CpG island CpG island 6312
Tssr128029 14 33193927 to 33193938 11 - TSS region transcription start site region 128029
Tssr125007 14 33194001 to 33194008 7 + TSS region transcription start site region 125007
Tssr125008 14 33194036 to 33194040 4 + TSS region transcription start site region 125008
Gm49029 14 33202858 to 33203263 405 + pseudogene predicted gene, 49029
Tssr125009 14 33203966 to 33203973 7 + TSS region transcription start site region 125009
Gm25498 14 33207152 to 33207280 128 + snoRNA gene predicted gene, 25498
Gm6340 14 33213160 to 33213392 232 + pseudogene predicted pseudogene 6340
Cpgi6313 14 33213885 to 33214144 259 CpG island CpG island 6313
Arhgap22 14 33214026 to 33369934 155908 + protein coding gene Rho GTPase activating protein 22
Tssr125010 14 33214040 to 33214069 29 + TSS region transcription start site region 125010
Tssr125011 14 33216569 to 33216611 42 + TSS region transcription start site region 125011
Tssr125012 14 33216817 to 33216903 86 + TSS region transcription start site region 125012
Tssr125013 14 33216973 to 33216984 11 + TSS region transcription start site region 125013
Tssr125014 14 33217038 to 33217046 8 + TSS region transcription start site region 125014
Gm49030 14 33218044 to 33220931 2887 - antisense lncRNA gene predicted gene, 49030
Tssr125015 14 33225438 to 33225441 3 + TSS region transcription start site region 125015
Tssr125016 14 33227650 to 33227662 12 + TSS region transcription start site region 125016
Gm41130 14 33229671 to 33231891 2220 - lncRNA gene predicted gene, 41130
Tssr125017 14 33247690 to 33247719 29 + TSS region transcription start site region 125017
Tssr128030 14 33247764 to 33247779 15 - TSS region transcription start site region 128030
Tssr128031 14 33247831 to 33247842 11 - TSS region transcription start site region 128031
Tssr128032 14 33247862 to 33247873 11 - TSS region transcription start site region 128032
Tssr125018 14 33250377 to 33250411 34 + TSS region transcription start site region 125018
Cpgi6314 14 33250411 to 33251034 623 CpG island CpG island 6314
Tssr125019 14 33250414 to 33250435 21 + TSS region transcription start site region 125019
Tssr125020 14 33250436 to 33250475 39 + TSS region transcription start site region 125020
Tssr125021 14 33250538 to 33250553 15 + TSS region transcription start site region 125021
D14Mit188 14 33252079 to 33252190 111 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 188
D14Mit175 14 33256211 to 33256349 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 175
Cpgi6315 14 33277638 to 33277848 210 CpG island CpG island 6315
Tssr125022 14 33294046 to 33294050 4 + TSS region transcription start site region 125022
Tssr125023 14 33312769 to 33312773 4 + TSS region transcription start site region 125023
Tssr125024 14 33317049 to 33317060 11 + TSS region transcription start site region 125024
Tssr125025 14 33317134 to 33317157 23 + TSS region transcription start site region 125025
Tssr125026 14 33317310 to 33317321 11 + TSS region transcription start site region 125026
Cpgi6316 14 33319382 to 33320626 1244 CpG island CpG island 6316
Tssr125027 14 33319741 to 33319744 3 + TSS region transcription start site region 125027
Tssr125028 14 33337406 to 33337415 9 + TSS region transcription start site region 125028
Tssr125029 14 33337435 to 33337443 8 + TSS region transcription start site region 125029
Tssr125030 14 33345612 to 33345636 24 + TSS region transcription start site region 125030
Cpgi6317 14 33350923 to 33351851 928 CpG island CpG island 6317
Tssr125031 14 33351292 to 33351312 20 + TSS region transcription start site region 125031
Tssr125032 14 33351314 to 33351349 35 + TSS region transcription start site region 125032
Gm15512 14 33365951 to 33370143 4192 - antisense lncRNA gene predicted gene 15512
Tssr128033 14 33370137 to 33370147 10 - TSS region transcription start site region 128033
Tssr128034 14 33371271 to 33371272 1 - TSS region transcription start site region 128034
Mapk8 14 33377898 to 33447158 69260 - protein coding gene mitogen-activated protein kinase 8
Tssr128035 14 33382137 to 33382145 8 - TSS region transcription start site region 128035
Tssr128036 14 33382832 to 33382836 4 - TSS region transcription start site region 128036
6030458A19Rik 14 33421245 to 33422282 1037 unclassified gene RIKEN cDNA 6030458A19 gene
Gm49037 14 33428642 to 33429025 383 - pseudogene predicted gene, 49037
Gm46448 14 33432133 to 33432940 807 + pseudogene predicted gene, 46448
Cpgi6318 14 33446485 to 33447681 1196 CpG island CpG island 6318
Tssr128037 14 33447120 to 33447133 13 - TSS region transcription start site region 128037
Tssr128038 14 33447142 to 33447179 37 - TSS region transcription start site region 128038
Tssr128039 14 33447184 to 33447200 16 - TSS region transcription start site region 128039
Tssr125033 14 33471532 to 33471540 8 + TSS region transcription start site region 125033
Tssr125034 14 33471565 to 33471582 17 + TSS region transcription start site region 125034
Tssr125035 14 33471583 to 33471593 10 + TSS region transcription start site region 125035
Frmpd2 14 33483501 to 33575269 91768 + protein coding gene FERM and PDZ domain containing 2
Tssr4370 14 33510929 to 33510932 3 - TSS region transcription start site region 4370
Cpgi6319 14 33589108 to 33589271 163 CpG island CpG island 6319
Ptpn20 14 33589207 to 33640754 51547 + protein coding gene protein tyrosine phosphatase, non-receptor type 20
Tssr125036 14 33589223 to 33589230 7 + TSS region transcription start site region 125036
Tssr125037 14 33589238 to 33589267 29 + TSS region transcription start site region 125037
Tssr125038 14 33590827 to 33590831 4 + TSS region transcription start site region 125038
Tssr128040 14 33609915 to 33609917 2 - TSS region transcription start site region 128040
Gm26228 14 33644495 to 33644601 106 + snRNA gene predicted gene, 26228
Tssr128041 14 33646338 to 33646345 7 - TSS region transcription start site region 128041