Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:32599622-33220350

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
Tssr124991 14 32599922 to 32599932 10 + TSS region transcription start site region 124991
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020
Gm36611 14 32752776 to 32770301 17525 - lncRNA gene predicted gene, 36611
Tssr124993 14 32771556 to 32771557 1 + TSS region transcription start site region 124993
Tmem273 14 32785963 to 32817984 32021 + protein coding gene transmembrane protein 273
Tssr124994 14 32786004 to 32786023 19 + TSS region transcription start site region 124994
Cpgi6309 14 32786800 to 32787200 400 CpG island CpG island 6309
Tssr124995 14 32811751 to 32811759 8 + TSS region transcription start site region 124995
Tssr124996 14 32833955 to 32833966 11 + TSS region transcription start site region 124996
Fam170b 14 32833962 to 32836789 2827 + protein coding gene family with sequence similarity 170, member B
Tssr124997 14 32833968 to 32834003 35 + TSS region transcription start site region 124997
Cpgi6310 14 32835501 to 32835848 347 CpG island CpG island 6310
Gm41129 14 32839273 to 32856669 17396 - lncRNA gene predicted gene, 41129
Cpgi6311 14 32856468 to 32857414 946 CpG island CpG island 6311
Vstm4 14 32856756 to 32939489 82733 + protein coding gene V-set and transmembrane domain containing 4
Tssr124998 14 32856782 to 32856808 26 + TSS region transcription start site region 124998
Tssr124999 14 32856817 to 32856830 13 + TSS region transcription start site region 124999
Tssr125000 14 32856856 to 32856895 39 + TSS region transcription start site region 125000
Tssr125001 14 32856897 to 32856916 19 + TSS region transcription start site region 125001
8030431A06Rik 14 32864650 to 32865679 1029 unclassified non-coding RNA gene RIKEN cDNA 8030431A06 gene
Tssr125002 14 32878375 to 32878386 11 + TSS region transcription start site region 125002
Gm7734 14 32897719 to 32898729 1010 + pseudogene predicted gene 7734
Gm36674 14 32904622 to 32915350 10728 - lncRNA gene predicted gene, 36674
Wdfy4 14 32959547 to 33185508 225961 - protein coding gene WD repeat and FYVE domain containing 4
Tssr125003 14 32991379 to 32991390 11 + TSS region transcription start site region 125003
Lrrc18 14 32991382 to 33015291 23909 + protein coding gene leucine rich repeat containing 18
Tssr125004 14 32991392 to 32991403 11 + TSS region transcription start site region 125004
Tssr125005 14 32991412 to 32991423 11 + TSS region transcription start site region 125005
Tssr125006 14 32991430 to 32991454 24 + TSS region transcription start site region 125006
D14Mit100 14 33008036 to 33008231 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 100
Tssr128021 14 33112250 to 33112262 12 - TSS region transcription start site region 128021
Tssr128022 14 33125275 to 33125279 4 - TSS region transcription start site region 128022
Tssr128023 14 33162954 to 33162967 13 - TSS region transcription start site region 128023
Tssr128024 14 33185080 to 33185100 20 - TSS region transcription start site region 128024
Tssr128025 14 33185115 to 33185131 16 - TSS region transcription start site region 128025
Tssr128026 14 33185139 to 33185166 27 - TSS region transcription start site region 128026
Tssr128027 14 33185174 to 33185188 14 - TSS region transcription start site region 128027
Tssr128028 14 33185489 to 33185557 68 - TSS region transcription start site region 128028
Cpgi6312 14 33189927 to 33190191 264 CpG island CpG island 6312
Tssr128029 14 33193927 to 33193938 11 - TSS region transcription start site region 128029
Tssr125007 14 33194001 to 33194008 7 + TSS region transcription start site region 125007
Tssr125008 14 33194036 to 33194040 4 + TSS region transcription start site region 125008
Gm49029 14 33202858 to 33203263 405 + pseudogene predicted gene, 49029
Tssr125009 14 33203966 to 33203973 7 + TSS region transcription start site region 125009
Gm25498 14 33207152 to 33207280 128 + snoRNA gene predicted gene, 25498
Gm6340 14 33213160 to 33213392 232 + pseudogene predicted pseudogene 6340
Cpgi6313 14 33213885 to 33214144 259 CpG island CpG island 6313
Arhgap22 14 33214026 to 33369934 155908 + protein coding gene Rho GTPase activating protein 22
Tssr125010 14 33214040 to 33214069 29 + TSS region transcription start site region 125010
Tssr125011 14 33216569 to 33216611 42 + TSS region transcription start site region 125011
Tssr125012 14 33216817 to 33216903 86 + TSS region transcription start site region 125012
Tssr125013 14 33216973 to 33216984 11 + TSS region transcription start site region 125013
Tssr125014 14 33217038 to 33217046 8 + TSS region transcription start site region 125014
Gm49030 14 33218044 to 33220931 2887 - antisense lncRNA gene predicted gene, 49030