Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:32569622-33250350

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ercc6 14 32513521 to 32580990 67469 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 6
Tssr124989 14 32573640 to 32573645 5 + TSS region transcription start site region 124989
Gm49743 14 32595333 to 32598118 2785 + unclassified gene predicted gene, 49743
Cpgi6307 14 32597061 to 32598352 1291 CpG island CpG island 6307
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Tssr124990 14 32599384 to 32599400 16 + TSS region transcription start site region 124990
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
Tssr124991 14 32599922 to 32599932 10 + TSS region transcription start site region 124991
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020
Gm36611 14 32752776 to 32770301 17525 - lncRNA gene predicted gene, 36611
Tssr124993 14 32771556 to 32771557 1 + TSS region transcription start site region 124993
Tmem273 14 32785963 to 32817984 32021 + protein coding gene transmembrane protein 273
Tssr124994 14 32786004 to 32786023 19 + TSS region transcription start site region 124994
Cpgi6309 14 32786800 to 32787200 400 CpG island CpG island 6309
Tssr124995 14 32811751 to 32811759 8 + TSS region transcription start site region 124995
Tssr124996 14 32833955 to 32833966 11 + TSS region transcription start site region 124996
Fam170b 14 32833962 to 32836789 2827 + protein coding gene family with sequence similarity 170, member B
Tssr124997 14 32833968 to 32834003 35 + TSS region transcription start site region 124997
Cpgi6310 14 32835501 to 32835848 347 CpG island CpG island 6310
Gm41129 14 32839273 to 32856669 17396 - lncRNA gene predicted gene, 41129
Cpgi6311 14 32856468 to 32857414 946 CpG island CpG island 6311
Vstm4 14 32856756 to 32939489 82733 + protein coding gene V-set and transmembrane domain containing 4
Tssr124998 14 32856782 to 32856808 26 + TSS region transcription start site region 124998
Tssr124999 14 32856817 to 32856830 13 + TSS region transcription start site region 124999
Tssr125000 14 32856856 to 32856895 39 + TSS region transcription start site region 125000
Tssr125001 14 32856897 to 32856916 19 + TSS region transcription start site region 125001
8030431A06Rik 14 32864650 to 32865679 1029 unclassified non-coding RNA gene RIKEN cDNA 8030431A06 gene
Tssr125002 14 32878375 to 32878386 11 + TSS region transcription start site region 125002
Gm7734 14 32897719 to 32898729 1010 + pseudogene predicted gene 7734
Gm36674 14 32904622 to 32915350 10728 - lncRNA gene predicted gene, 36674
Wdfy4 14 32959547 to 33185508 225961 - protein coding gene WD repeat and FYVE domain containing 4
Tssr125003 14 32991379 to 32991390 11 + TSS region transcription start site region 125003
Lrrc18 14 32991382 to 33015291 23909 + protein coding gene leucine rich repeat containing 18
Tssr125004 14 32991392 to 32991403 11 + TSS region transcription start site region 125004
Tssr125005 14 32991412 to 32991423 11 + TSS region transcription start site region 125005
Tssr125006 14 32991430 to 32991454 24 + TSS region transcription start site region 125006
D14Mit100 14 33008036 to 33008231 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 100
Tssr128021 14 33112250 to 33112262 12 - TSS region transcription start site region 128021
Tssr128022 14 33125275 to 33125279 4 - TSS region transcription start site region 128022
Tssr128023 14 33162954 to 33162967 13 - TSS region transcription start site region 128023
Tssr128024 14 33185080 to 33185100 20 - TSS region transcription start site region 128024
Tssr128025 14 33185115 to 33185131 16 - TSS region transcription start site region 128025
Tssr128026 14 33185139 to 33185166 27 - TSS region transcription start site region 128026
Tssr128027 14 33185174 to 33185188 14 - TSS region transcription start site region 128027
Tssr128028 14 33185489 to 33185557 68 - TSS region transcription start site region 128028
Cpgi6312 14 33189927 to 33190191 264 CpG island CpG island 6312
Tssr128029 14 33193927 to 33193938 11 - TSS region transcription start site region 128029
Tssr125007 14 33194001 to 33194008 7 + TSS region transcription start site region 125007
Tssr125008 14 33194036 to 33194040 4 + TSS region transcription start site region 125008
Gm49029 14 33202858 to 33203263 405 + pseudogene predicted gene, 49029
Tssr125009 14 33203966 to 33203973 7 + TSS region transcription start site region 125009
Gm25498 14 33207152 to 33207280 128 + snoRNA gene predicted gene, 25498
Gm6340 14 33213160 to 33213392 232 + pseudogene predicted pseudogene 6340
Cpgi6313 14 33213885 to 33214144 259 CpG island CpG island 6313
Arhgap22 14 33214026 to 33369934 155908 + protein coding gene Rho GTPase activating protein 22
Tssr125010 14 33214040 to 33214069 29 + TSS region transcription start site region 125010
Tssr125011 14 33216569 to 33216611 42 + TSS region transcription start site region 125011
Tssr125012 14 33216817 to 33216903 86 + TSS region transcription start site region 125012
Tssr125013 14 33216973 to 33216984 11 + TSS region transcription start site region 125013
Tssr125014 14 33217038 to 33217046 8 + TSS region transcription start site region 125014
Gm49030 14 33218044 to 33220931 2887 - antisense lncRNA gene predicted gene, 49030
Tssr125015 14 33225438 to 33225441 3 + TSS region transcription start site region 125015
Tssr125016 14 33227650 to 33227662 12 + TSS region transcription start site region 125016
Gm41130 14 33229671 to 33231891 2220 - lncRNA gene predicted gene, 41130
Tssr125017 14 33247690 to 33247719 29 + TSS region transcription start site region 125017
Tssr128030 14 33247764 to 33247779 15 - TSS region transcription start site region 128030
Tssr128031 14 33247831 to 33247842 11 - TSS region transcription start site region 128031
Tssr128032 14 33247862 to 33247873 11 - TSS region transcription start site region 128032