Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:32454922-32744932

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chat 14 32408203 to 32465909 57706 - protein coding gene choline acetyltransferase
Cpgi6304 14 32460606 to 32460770 164 CpG island CpG island 6304
Tssr128015 14 32460901 to 32460916 15 - TSS region transcription start site region 128015
Slc18a3 14 32462438 to 32464850 2412 - protein coding gene solute carrier family 18 (vesicular monoamine), member 3
Cpgi6305 14 32462730 to 32465452 2722 CpG island CpG island 6305
Tssr128016 14 32464707 to 32464716 9 - TSS region transcription start site region 128016
Tssr128017 14 32464764 to 32464777 13 - TSS region transcription start site region 128017
Gm2990 14 32465042 to 32483548 18506 + antisense lncRNA gene predicted gene 2990
Tssr124985 14 32492863 to 32492885 22 + TSS region transcription start site region 124985
Gm7715 14 32513284 to 32513846 562 unclassified gene predicted gene 7715
Cpgi6306 14 32513314 to 32514147 833 CpG island CpG island 6306
Tssr124986 14 32513486 to 32513548 62 + TSS region transcription start site region 124986
Ercc6 14 32513521 to 32580990 67469 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 6
Tssr124987 14 32513555 to 32513560 5 + TSS region transcription start site region 124987
Tssr124988 14 32513561 to 32513571 10 + TSS region transcription start site region 124988
Tssr124989 14 32573640 to 32573645 5 + TSS region transcription start site region 124989
Gm49743 14 32595333 to 32598118 2785 + unclassified gene predicted gene, 49743
Cpgi6307 14 32597061 to 32598352 1291 CpG island CpG island 6307
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Tssr124990 14 32599384 to 32599400 16 + TSS region transcription start site region 124990
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
Tssr124991 14 32599922 to 32599932 10 + TSS region transcription start site region 124991
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020