Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:32224119-33120293

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Parg 14 32201949 to 32297550 95601 + protein coding gene poly (ADP-ribose) glycohydrolase
Gm49196 14 32230846 to 32231443 597 + pseudogene predicted gene, 49196
Gm7707 14 32266593 to 32267748 1155 - pseudogene predicted gene 7707
Gm17210 14 32292924 to 32294974 2050 - antisense lncRNA gene predicted gene 17210
Gm48914 14 32303662 to 32317985 14323 - lincRNA gene predicted gene, 48914
Gm46447 14 32304301 to 32310486 6185 + lincRNA gene predicted gene, 46447
Tssr128011 14 32317969 to 32317989 20 - TSS region transcription start site region 128011
Tssr124979 14 32318170 to 32318181 11 + TSS region transcription start site region 124979
Cpgi6302 14 32321800 to 32322543 743 CpG island CpG island 6302
Tssr124980 14 32321987 to 32322042 55 + TSS region transcription start site region 124980
Ogdhl 14 32322019 to 32348151 26132 + protein coding gene oxoglutarate dehydrogenase-like
Tssr124981 14 32322053 to 32322069 16 + TSS region transcription start site region 124981
Tssr124982 14 32326695 to 32326705 10 + TSS region transcription start site region 124982
Tssr124983 14 32342138 to 32342142 4 + TSS region transcription start site region 124983
Tssr124984 14 32347864 to 32347869 5 + TSS region transcription start site region 124984
1700024G13Rik 14 32376502 to 32388373 11871 - protein coding gene RIKEN cDNA 1700024G13 gene
Cpgi6303 14 32388234 to 32388483 249 CpG island CpG island 6303
Tssr128012 14 32388301 to 32388309 8 - TSS region transcription start site region 128012
Tssr128013 14 32388326 to 32388337 11 - TSS region transcription start site region 128013
Tssr128014 14 32388355 to 32388396 41 - TSS region transcription start site region 128014
D14Mit128 14 32401202 to 32401433 231 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 128
Chat 14 32408203 to 32465909 57706 - protein coding gene choline acetyltransferase
D14Mit52 14 32438659 to 32438808 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 52
Hypn 14 32438659 to 32438808 149 QTL hyperinsulinemia
Cpgi6304 14 32460606 to 32460770 164 CpG island CpG island 6304
Tssr128015 14 32460901 to 32460916 15 - TSS region transcription start site region 128015
Slc18a3 14 32462438 to 32464850 2412 - protein coding gene solute carrier family 18 (vesicular monoamine), member 3
Cpgi6305 14 32462730 to 32465452 2722 CpG island CpG island 6305
Tssr128016 14 32464707 to 32464716 9 - TSS region transcription start site region 128016
Tssr128017 14 32464764 to 32464777 13 - TSS region transcription start site region 128017
Gm2990 14 32465042 to 32483548 18506 + antisense lncRNA gene predicted gene 2990
Tssr124985 14 32492863 to 32492885 22 + TSS region transcription start site region 124985
Gm7715 14 32513284 to 32513846 562 unclassified gene predicted gene 7715
Cpgi6306 14 32513314 to 32514147 833 CpG island CpG island 6306
Tssr124986 14 32513486 to 32513548 62 + TSS region transcription start site region 124986
Ercc6 14 32513521 to 32580990 67469 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 6
Tssr124987 14 32513555 to 32513560 5 + TSS region transcription start site region 124987
Tssr124988 14 32513561 to 32513571 10 + TSS region transcription start site region 124988
Tssr124989 14 32573640 to 32573645 5 + TSS region transcription start site region 124989
Gm49743 14 32595333 to 32598118 2785 + unclassified gene predicted gene, 49743
Cpgi6307 14 32597061 to 32598352 1291 CpG island CpG island 6307
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Tssr124990 14 32599384 to 32599400 16 + TSS region transcription start site region 124990
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
Tssr124991 14 32599922 to 32599932 10 + TSS region transcription start site region 124991
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020
Gm36611 14 32752776 to 32770301 17525 - lncRNA gene predicted gene, 36611
Tssr124993 14 32771556 to 32771557 1 + TSS region transcription start site region 124993
Tmem273 14 32785963 to 32817984 32021 + protein coding gene transmembrane protein 273
Tssr124994 14 32786004 to 32786023 19 + TSS region transcription start site region 124994
Cpgi6309 14 32786800 to 32787200 400 CpG island CpG island 6309
Tssr124995 14 32811751 to 32811759 8 + TSS region transcription start site region 124995
Tssr124996 14 32833955 to 32833966 11 + TSS region transcription start site region 124996
Fam170b 14 32833962 to 32836789 2827 + protein coding gene family with sequence similarity 170, member B
Tssr124997 14 32833968 to 32834003 35 + TSS region transcription start site region 124997
Cpgi6310 14 32835501 to 32835848 347 CpG island CpG island 6310
Gm41129 14 32839273 to 32856669 17396 - lncRNA gene predicted gene, 41129
Cpgi6311 14 32856468 to 32857414 946 CpG island CpG island 6311
Vstm4 14 32856756 to 32939489 82733 + protein coding gene V-set and transmembrane domain containing 4
Tssr124998 14 32856782 to 32856808 26 + TSS region transcription start site region 124998
Tssr124999 14 32856817 to 32856830 13 + TSS region transcription start site region 124999
Tssr125000 14 32856856 to 32856895 39 + TSS region transcription start site region 125000
Tssr125001 14 32856897 to 32856916 19 + TSS region transcription start site region 125001
8030431A06Rik 14 32864650 to 32865679 1029 unclassified non-coding RNA gene RIKEN cDNA 8030431A06 gene
Tssr125002 14 32878375 to 32878386 11 + TSS region transcription start site region 125002
Gm7734 14 32897719 to 32898729 1010 + pseudogene predicted gene 7734
Gm36674 14 32904622 to 32915350 10728 - lncRNA gene predicted gene, 36674
Wdfy4 14 32959547 to 33185508 225961 - protein coding gene WD repeat and FYVE domain containing 4
Tssr125003 14 32991379 to 32991390 11 + TSS region transcription start site region 125003
Lrrc18 14 32991382 to 33015291 23909 + protein coding gene leucine rich repeat containing 18
Tssr125004 14 32991392 to 32991403 11 + TSS region transcription start site region 125004
Tssr125005 14 32991412 to 32991423 11 + TSS region transcription start site region 125005
Tssr125006 14 32991430 to 32991454 24 + TSS region transcription start site region 125006
D14Mit100 14 33008036 to 33008231 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 100
Tssr128021 14 33112250 to 33112262 12 - TSS region transcription start site region 128021