Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:31971556-33571557

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200 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
twit 14 31646980 to 33256349 1609369 heritable phenotypic marker twitter
4930425P05Rik 14 32012141 to 32013002 861 - lincRNA gene RIKEN cDNA 4930425P05 gene
Gm26045 14 32023344 to 32023440 96 + unclassified non-coding RNA gene predicted gene, 26045
Galnt15 14 32028989 to 32062197 33208 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 15
Tssr124958 14 32029013 to 32029044 31 + TSS region transcription start site region 124958
Tssr4368 14 32029220 to 32029237 17 + TSS region transcription start site region 4368
Cpgi6297 14 32029377 to 32029575 198 CpG island CpG island 6297
Tssr124959 14 32029604 to 32029657 53 + TSS region transcription start site region 124959
Gm49084 14 32035915 to 32036338 423 - pseudogene predicted gene, 49084
Dph3 14 32080566 to 32085729 5163 - protein coding gene diphthamine biosynthesis 3
Cpgi6298 14 32085233 to 32086039 806 CpG island CpG island 6298
Tssr128002 14 32085278 to 32085328 50 - TSS region transcription start site region 128002
Tssr4369 14 32085546 to 32085558 12 - TSS region transcription start site region 4369
Tssr128003 14 32085562 to 32085590 28 - TSS region transcription start site region 128003
Tssr128004 14 32085595 to 32085639 44 - TSS region transcription start site region 128004
Oxnad1 14 32085628 to 32103203 17575 + protein coding gene oxidoreductase NAD-binding domain containing 1
Tssr124960 14 32085677 to 32085695 18 + TSS region transcription start site region 124960
Tssr124961 14 32085725 to 32085747 22 + TSS region transcription start site region 124961
Tssr124962 14 32085753 to 32085800 47 + TSS region transcription start site region 124962
Tssr124963 14 32085804 to 32085865 61 + TSS region transcription start site region 124963
Tssr124964 14 32099378 to 32099399 21 + TSS region transcription start site region 124964
Tssr128005 14 32124403 to 32124410 7 - TSS region transcription start site region 128005
Gm41127 14 32140431 to 32144811 4380 - lncRNA gene predicted gene, 41127
Tssr124965 14 32142021 to 32142025 4 + TSS region transcription start site region 124965
Msmb 14 32142023 to 32158327 16304 + protein coding gene beta-microseminoprotein
Tssr128006 14 32145708 to 32145725 17 - TSS region transcription start site region 128006
Tssr128007 14 32146191 to 32146203 12 - TSS region transcription start site region 128007
Gm18909 14 32154744 to 32155919 1175 - pseudogene predicted gene, 18909
Tssr124966 14 32159332 to 32159353 21 + TSS region transcription start site region 124966
Cpgi6299 14 32159755 to 32160471 716 CpG island CpG island 6299
Ncoa4 14 32159887 to 32179855 19968 + protein coding gene nuclear receptor coactivator 4
Tssr124967 14 32159901 to 32159989 88 + TSS region transcription start site region 124967
Tssr128008 14 32160068 to 32160070 2 - TSS region transcription start site region 128008
Cpgi6300 14 32165518 to 32165946 428 CpG island CpG island 6300
Tssr124968 14 32165528 to 32165541 13 + TSS region transcription start site region 124968
Tssr124969 14 32165573 to 32165599 26 + TSS region transcription start site region 124969
Tssr124970 14 32165758 to 32165767 9 + TSS region transcription start site region 124970
Tssr124971 14 32165784 to 32165798 14 + TSS region transcription start site region 124971
Tssr124972 14 32165819 to 32165831 12 + TSS region transcription start site region 124972
Tssr124973 14 32165840 to 32165856 16 + TSS region transcription start site region 124973
Tssr124974 14 32165874 to 32165905 31 + TSS region transcription start site region 124974
Tssr124975 14 32166104 to 32166123 19 + TSS region transcription start site region 124975
Tssr124976 14 32175652 to 32175654 2 + TSS region transcription start site region 124976
Timm23 14 32180166 to 32201891 21725 - protein coding gene translocase of inner mitochondrial membrane 23
Gm23946 14 32191854 to 32192050 196 - snoRNA gene predicted gene, 23946
D14Mit254 14 32194628 to 32194746 118 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 254
Cpgi6301 14 32201378 to 32202608 1230 CpG island CpG island 6301
Tssr128009 14 32201887 to 32201908 21 - TSS region transcription start site region 128009
Tssr124977 14 32201937 to 32201995 58 + TSS region transcription start site region 124977
Parg 14 32201949 to 32297550 95601 + protein coding gene poly (ADP-ribose) glycohydrolase
Tssr124978 14 32202004 to 32202013 9 + TSS region transcription start site region 124978
Tssr128010 14 32202308 to 32202322 14 - TSS region transcription start site region 128010
Gm49196 14 32230846 to 32231443 597 + pseudogene predicted gene, 49196
Gm7707 14 32266593 to 32267748 1155 - pseudogene predicted gene 7707
Gm17210 14 32292924 to 32294974 2050 - antisense lncRNA gene predicted gene 17210
Gm48914 14 32303662 to 32317985 14323 - lincRNA gene predicted gene, 48914
Gm46447 14 32304301 to 32310486 6185 + lincRNA gene predicted gene, 46447
Tssr128011 14 32317969 to 32317989 20 - TSS region transcription start site region 128011
Tssr124979 14 32318170 to 32318181 11 + TSS region transcription start site region 124979
Cpgi6302 14 32321800 to 32322543 743 CpG island CpG island 6302
Tssr124980 14 32321987 to 32322042 55 + TSS region transcription start site region 124980
Ogdhl 14 32322019 to 32348151 26132 + protein coding gene oxoglutarate dehydrogenase-like
Tssr124981 14 32322053 to 32322069 16 + TSS region transcription start site region 124981
Tssr124982 14 32326695 to 32326705 10 + TSS region transcription start site region 124982
Tssr124983 14 32342138 to 32342142 4 + TSS region transcription start site region 124983
Tssr124984 14 32347864 to 32347869 5 + TSS region transcription start site region 124984
1700024G13Rik 14 32376502 to 32388373 11871 - protein coding gene RIKEN cDNA 1700024G13 gene
Cpgi6303 14 32388234 to 32388483 249 CpG island CpG island 6303
Tssr128012 14 32388301 to 32388309 8 - TSS region transcription start site region 128012
Tssr128013 14 32388326 to 32388337 11 - TSS region transcription start site region 128013
Tssr128014 14 32388355 to 32388396 41 - TSS region transcription start site region 128014
D14Mit128 14 32401202 to 32401433 231 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 128
Chat 14 32408203 to 32465909 57706 - protein coding gene choline acetyltransferase
D14Mit52 14 32438659 to 32438808 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 52
Hypn 14 32438659 to 32438808 149 QTL hyperinsulinemia
Cpgi6304 14 32460606 to 32460770 164 CpG island CpG island 6304
Tssr128015 14 32460901 to 32460916 15 - TSS region transcription start site region 128015
Slc18a3 14 32462438 to 32464850 2412 - protein coding gene solute carrier family 18 (vesicular monoamine), member 3
Cpgi6305 14 32462730 to 32465452 2722 CpG island CpG island 6305
Tssr128016 14 32464707 to 32464716 9 - TSS region transcription start site region 128016
Tssr128017 14 32464764 to 32464777 13 - TSS region transcription start site region 128017
Gm2990 14 32465042 to 32483548 18506 + antisense lncRNA gene predicted gene 2990
Tssr124985 14 32492863 to 32492885 22 + TSS region transcription start site region 124985
Gm7715 14 32513284 to 32513846 562 unclassified gene predicted gene 7715
Cpgi6306 14 32513314 to 32514147 833 CpG island CpG island 6306
Tssr124986 14 32513486 to 32513548 62 + TSS region transcription start site region 124986
Ercc6 14 32513521 to 32580990 67469 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 6
Tssr124987 14 32513555 to 32513560 5 + TSS region transcription start site region 124987
Tssr124988 14 32513561 to 32513571 10 + TSS region transcription start site region 124988
Tssr124989 14 32573640 to 32573645 5 + TSS region transcription start site region 124989
Gm49743 14 32595333 to 32598118 2785 + unclassified gene predicted gene, 49743
Cpgi6307 14 32597061 to 32598352 1291 CpG island CpG island 6307
Cpgi6308 14 32599282 to 32600390 1108 CpG island CpG island 6308
Tssr124990 14 32599384 to 32599400 16 + TSS region transcription start site region 124990
Prrxl1 14 32599407 to 32649246 49839 + protein coding gene paired related homeobox protein-like 1
Tssr124991 14 32599922 to 32599932 10 + TSS region transcription start site region 124991
3425401B19Rik 14 32659119 to 32685293 26174 - protein coding gene RIKEN cDNA 3425401B19 gene
Tssr128018 14 32685246 to 32685312 66 - TSS region transcription start site region 128018
Tssr128019 14 32685455 to 32685470 15 - TSS region transcription start site region 128019
Gm28651 14 32685648 to 32689250 3602 + lincRNA gene predicted gene 28651
Tssr124992 14 32685689 to 32685698 9 + TSS region transcription start site region 124992
Tssr128020 14 32707758 to 32707780 22 - TSS region transcription start site region 128020
Gm36611 14 32752776 to 32770301 17525 - lncRNA gene predicted gene, 36611
Tssr124993 14 32771556 to 32771557 1 + TSS region transcription start site region 124993
Tmem273 14 32785963 to 32817984 32021 + protein coding gene transmembrane protein 273
Tssr124994 14 32786004 to 32786023 19 + TSS region transcription start site region 124994
Cpgi6309 14 32786800 to 32787200 400 CpG island CpG island 6309
Tssr124995 14 32811751 to 32811759 8 + TSS region transcription start site region 124995
Tssr124996 14 32833955 to 32833966 11 + TSS region transcription start site region 124996
Fam170b 14 32833962 to 32836789 2827 + protein coding gene family with sequence similarity 170, member B
Tssr124997 14 32833968 to 32834003 35 + TSS region transcription start site region 124997
Cpgi6310 14 32835501 to 32835848 347 CpG island CpG island 6310
Gm41129 14 32839273 to 32856669 17396 - lncRNA gene predicted gene, 41129
Cpgi6311 14 32856468 to 32857414 946 CpG island CpG island 6311
Vstm4 14 32856756 to 32939489 82733 + protein coding gene V-set and transmembrane domain containing 4
Tssr124998 14 32856782 to 32856808 26 + TSS region transcription start site region 124998
Tssr124999 14 32856817 to 32856830 13 + TSS region transcription start site region 124999
Tssr125000 14 32856856 to 32856895 39 + TSS region transcription start site region 125000
Tssr125001 14 32856897 to 32856916 19 + TSS region transcription start site region 125001
8030431A06Rik 14 32864650 to 32865679 1029 unclassified non-coding RNA gene RIKEN cDNA 8030431A06 gene
Tssr125002 14 32878375 to 32878386 11 + TSS region transcription start site region 125002
Gm7734 14 32897719 to 32898729 1010 + pseudogene predicted gene 7734
Gm36674 14 32904622 to 32915350 10728 - lncRNA gene predicted gene, 36674
Wdfy4 14 32959547 to 33185508 225961 - protein coding gene WD repeat and FYVE domain containing 4
Tssr125003 14 32991379 to 32991390 11 + TSS region transcription start site region 125003
Lrrc18 14 32991382 to 33015291 23909 + protein coding gene leucine rich repeat containing 18
Tssr125004 14 32991392 to 32991403 11 + TSS region transcription start site region 125004
Tssr125005 14 32991412 to 32991423 11 + TSS region transcription start site region 125005
Tssr125006 14 32991430 to 32991454 24 + TSS region transcription start site region 125006
D14Mit100 14 33008036 to 33008231 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 100
Tssr128021 14 33112250 to 33112262 12 - TSS region transcription start site region 128021
Tssr128022 14 33125275 to 33125279 4 - TSS region transcription start site region 128022
Tssr128023 14 33162954 to 33162967 13 - TSS region transcription start site region 128023
Tssr128024 14 33185080 to 33185100 20 - TSS region transcription start site region 128024
Tssr128025 14 33185115 to 33185131 16 - TSS region transcription start site region 128025
Tssr128026 14 33185139 to 33185166 27 - TSS region transcription start site region 128026
Tssr128027 14 33185174 to 33185188 14 - TSS region transcription start site region 128027
Tssr128028 14 33185489 to 33185557 68 - TSS region transcription start site region 128028
Cpgi6312 14 33189927 to 33190191 264 CpG island CpG island 6312
Tssr128029 14 33193927 to 33193938 11 - TSS region transcription start site region 128029
Tssr125007 14 33194001 to 33194008 7 + TSS region transcription start site region 125007
Tssr125008 14 33194036 to 33194040 4 + TSS region transcription start site region 125008
Gm49029 14 33202858 to 33203263 405 + pseudogene predicted gene, 49029
Tssr125009 14 33203966 to 33203973 7 + TSS region transcription start site region 125009
Gm25498 14 33207152 to 33207280 128 + snoRNA gene predicted gene, 25498
Gm6340 14 33213160 to 33213392 232 + pseudogene predicted pseudogene 6340
Cpgi6313 14 33213885 to 33214144 259 CpG island CpG island 6313
Arhgap22 14 33214026 to 33369934 155908 + protein coding gene Rho GTPase activating protein 22
Tssr125010 14 33214040 to 33214069 29 + TSS region transcription start site region 125010
Tssr125011 14 33216569 to 33216611 42 + TSS region transcription start site region 125011
Tssr125012 14 33216817 to 33216903 86 + TSS region transcription start site region 125012
Tssr125013 14 33216973 to 33216984 11 + TSS region transcription start site region 125013
Tssr125014 14 33217038 to 33217046 8 + TSS region transcription start site region 125014
Gm49030 14 33218044 to 33220931 2887 - antisense lncRNA gene predicted gene, 49030
Tssr125015 14 33225438 to 33225441 3 + TSS region transcription start site region 125015
Tssr125016 14 33227650 to 33227662 12 + TSS region transcription start site region 125016
Gm41130 14 33229671 to 33231891 2220 - lncRNA gene predicted gene, 41130
Tssr125017 14 33247690 to 33247719 29 + TSS region transcription start site region 125017
Tssr128030 14 33247764 to 33247779 15 - TSS region transcription start site region 128030
Tssr128031 14 33247831 to 33247842 11 - TSS region transcription start site region 128031
Tssr128032 14 33247862 to 33247873 11 - TSS region transcription start site region 128032
Tssr125018 14 33250377 to 33250411 34 + TSS region transcription start site region 125018
Cpgi6314 14 33250411 to 33251034 623 CpG island CpG island 6314
Tssr125019 14 33250414 to 33250435 21 + TSS region transcription start site region 125019
Tssr125020 14 33250436 to 33250475 39 + TSS region transcription start site region 125020
Tssr125021 14 33250538 to 33250553 15 + TSS region transcription start site region 125021
D14Mit188 14 33252079 to 33252190 111 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 188
D14Mit175 14 33256211 to 33256349 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 175
Cpgi6315 14 33277638 to 33277848 210 CpG island CpG island 6315
Tssr125022 14 33294046 to 33294050 4 + TSS region transcription start site region 125022
Tssr125023 14 33312769 to 33312773 4 + TSS region transcription start site region 125023
Tssr125024 14 33317049 to 33317060 11 + TSS region transcription start site region 125024
Tssr125025 14 33317134 to 33317157 23 + TSS region transcription start site region 125025
Tssr125026 14 33317310 to 33317321 11 + TSS region transcription start site region 125026
Cpgi6316 14 33319382 to 33320626 1244 CpG island CpG island 6316
Tssr125027 14 33319741 to 33319744 3 + TSS region transcription start site region 125027
Tssr125028 14 33337406 to 33337415 9 + TSS region transcription start site region 125028
Tssr125029 14 33337435 to 33337443 8 + TSS region transcription start site region 125029
Tssr125030 14 33345612 to 33345636 24 + TSS region transcription start site region 125030
Cpgi6317 14 33350923 to 33351851 928 CpG island CpG island 6317
Tssr125031 14 33351292 to 33351312 20 + TSS region transcription start site region 125031
Tssr125032 14 33351314 to 33351349 35 + TSS region transcription start site region 125032
Gm15512 14 33365951 to 33370143 4192 - antisense lncRNA gene predicted gene 15512
Tssr128033 14 33370137 to 33370147 10 - TSS region transcription start site region 128033
Tssr128034 14 33371271 to 33371272 1 - TSS region transcription start site region 128034
Mapk8 14 33377898 to 33447158 69260 - protein coding gene mitogen-activated protein kinase 8
Tssr128035 14 33382137 to 33382145 8 - TSS region transcription start site region 128035
Tssr128036 14 33382832 to 33382836 4 - TSS region transcription start site region 128036
6030458A19Rik 14 33421245 to 33422282 1037 unclassified gene RIKEN cDNA 6030458A19 gene
Gm49037 14 33428642 to 33429025 383 - pseudogene predicted gene, 49037
Gm46448 14 33432133 to 33432940 807 + pseudogene predicted gene, 46448
Cpgi6318 14 33446485 to 33447681 1196 CpG island CpG island 6318
Tssr128037 14 33447120 to 33447133 13 - TSS region transcription start site region 128037
Tssr128038 14 33447142 to 33447179 37 - TSS region transcription start site region 128038
Tssr128039 14 33447184 to 33447200 16 - TSS region transcription start site region 128039
Tssr125033 14 33471532 to 33471540 8 + TSS region transcription start site region 125033
Tssr125034 14 33471565 to 33471582 17 + TSS region transcription start site region 125034
Tssr125035 14 33471583 to 33471593 10 + TSS region transcription start site region 125035
Frmpd2 14 33483501 to 33575269 91768 + protein coding gene FERM and PDZ domain containing 2
Tssr4370 14 33510929 to 33510932 3 - TSS region transcription start site region 4370