Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:31571884-32102181

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Colq 14 31523082 to 31591343 68261 - protein coding gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Gm49387 14 31552905 to 31640878 87973 - protein coding gene predicted gene, 49387
Tssr124949 14 31575493 to 31575502 9 + TSS region transcription start site region 124949
Tssr124950 14 31575522 to 31575532 10 + TSS region transcription start site region 124950
Tssr127975 14 31577283 to 31577294 11 - TSS region transcription start site region 127975
Tssr127976 14 31577318 to 31577334 16 - TSS region transcription start site region 127976
Tssr127977 14 31591316 to 31591362 46 - TSS region transcription start site region 127977
Hacl1 14 31607226 to 31640965 33739 - protein coding gene 2-hydroxyacyl-CoA lyase 1
Tssr124951 14 31619003 to 31619011 8 + TSS region transcription start site region 124951
Tssr127978 14 31619034 to 31619043 9 - TSS region transcription start site region 127978
Tssr127979 14 31633687 to 31633699 12 - TSS region transcription start site region 127979
Tssr127980 14 31637738 to 31637744 6 - TSS region transcription start site region 127980
Cpgi6293 14 31640415 to 31641427 1012 CpG island CpG island 6293
Tssr127981 14 31640547 to 31640575 28 - TSS region transcription start site region 127981
Tssr127982 14 31640891 to 31640980 89 - TSS region transcription start site region 127982
Tssr124952 14 31641018 to 31641029 11 + TSS region transcription start site region 124952
Btd 14 31641028 to 31668197 27169 + protein coding gene biotinidase
Tssr124953 14 31641051 to 31641082 31 + TSS region transcription start site region 124953
Tssr127983 14 31641205 to 31641272 67 - TSS region transcription start site region 127983
D14Mit174 14 31646980 to 31647125 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 174
twit 14 31646980 to 33256349 1609369 heritable phenotypic marker twitter
Tssr127984 14 31653273 to 31653279 6 - TSS region transcription start site region 127984
Cpgi6294 14 31661553 to 31662287 734 CpG island CpG island 6294
Tssr124954 14 31665812 to 31665823 11 + TSS region transcription start site region 124954
Tssr124955 14 31671864 to 31671894 30 + TSS region transcription start site region 124955
Cpgi6295 14 31685622 to 31685865 243 CpG island CpG island 6295
Ankrd28 14 31698768 to 31830415 131647 - protein coding gene ankyrin repeat domain 28
Tssr127985 14 31729014 to 31729017 3 - TSS region transcription start site region 127985
Tssr127986 14 31742827 to 31742838 11 - TSS region transcription start site region 127986
Gm49308 14 31750803 to 31754414 3611 - unclassified gene predicted gene, 49308
Tssr127987 14 31780928 to 31780963 35 - TSS region transcription start site region 127987
Tssr127988 14 31780972 to 31780987 15 - TSS region transcription start site region 127988
Tssr127989 14 31780998 to 31781014 16 - TSS region transcription start site region 127989
Tssr127990 14 31781401 to 31781412 11 - TSS region transcription start site region 127990
Tssr127991 14 31781423 to 31781440 17 - TSS region transcription start site region 127991
Tssr127992 14 31781448 to 31781471 23 - TSS region transcription start site region 127992
Tssr127993 14 31781488 to 31781501 13 - TSS region transcription start site region 127993
Tssr127994 14 31781587 to 31781596 9 - TSS region transcription start site region 127994
Tssr127995 14 31781617 to 31781632 15 - TSS region transcription start site region 127995
Tssr127996 14 31781633 to 31781661 28 - TSS region transcription start site region 127996
Tssr127997 14 31781662 to 31781731 69 - TSS region transcription start site region 127997
Tssr127998 14 31781913 to 31781935 22 - TSS region transcription start site region 127998
Tssr127999 14 31781996 to 31782023 27 - TSS region transcription start site region 127999
Gm49309 14 31801559 to 31803411 1852 + pseudogene predicted gene, 49309
Cpgi6296 14 31829616 to 31831235 1619 CpG island CpG island 6296
Tssr128000 14 31830402 to 31830440 38 - TSS region transcription start site region 128000
Tssr128001 14 31830653 to 31830733 80 - TSS region transcription start site region 128001
Gm22876 14 31836884 to 31837181 297 - unclassified non-coding RNA gene predicted gene, 22876
Gm36164 14 31912995 to 31914595 1600 + lncRNA gene predicted gene, 36164
D830044D21Rik 14 31929500 to 31943101 13601 + lincRNA gene RIKEN cDNA D830044D21 gene
Tssr124956 14 31929583 to 31929594 11 + TSS region transcription start site region 124956
Tssr124957 14 31929617 to 31929640 23 + TSS region transcription start site region 124957
Gm41125 14 31943562 to 31946428 2866 + lncRNA gene predicted gene, 41125
4930425P05Rik 14 32012141 to 32013002 861 - lincRNA gene RIKEN cDNA 4930425P05 gene
Gm26045 14 32023344 to 32023440 96 + unclassified non-coding RNA gene predicted gene, 26045
Galnt15 14 32028989 to 32062197 33208 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 15
Tssr124958 14 32029013 to 32029044 31 + TSS region transcription start site region 124958
Tssr4368 14 32029220 to 32029237 17 + TSS region transcription start site region 4368
Cpgi6297 14 32029377 to 32029575 198 CpG island CpG island 6297
Tssr124959 14 32029604 to 32029657 53 + TSS region transcription start site region 124959
Gm49084 14 32035915 to 32036338 423 - pseudogene predicted gene, 49084
Dph3 14 32080566 to 32085729 5163 - protein coding gene diphthamine biosynthesis 3
Cpgi6298 14 32085233 to 32086039 806 CpG island CpG island 6298
Tssr128002 14 32085278 to 32085328 50 - TSS region transcription start site region 128002
Tssr4369 14 32085546 to 32085558 12 - TSS region transcription start site region 4369
Tssr128003 14 32085562 to 32085590 28 - TSS region transcription start site region 128003
Tssr128004 14 32085595 to 32085639 44 - TSS region transcription start site region 128004
Oxnad1 14 32085628 to 32103203 17575 + protein coding gene oxidoreductase NAD-binding domain containing 1
Tssr124960 14 32085677 to 32085695 18 + TSS region transcription start site region 124960
Tssr124961 14 32085725 to 32085747 22 + TSS region transcription start site region 124961
Tssr124962 14 32085753 to 32085800 47 + TSS region transcription start site region 124962
Tssr124963 14 32085804 to 32085865 61 + TSS region transcription start site region 124963
Tssr124964 14 32099378 to 32099399 21 + TSS region transcription start site region 124964