Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:31417283-31737294

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh3bp5 14 31373774 to 31436033 62259 - protein coding gene SH3-domain binding protein 5 (BTK-associated)
Tssr127959 14 31417666 to 31417678 12 - TSS region transcription start site region 127959
Tssr127960 14 31434275 to 31434286 11 - TSS region transcription start site region 127960
Tssr127961 14 31434319 to 31434326 7 - TSS region transcription start site region 127961
Cpgi6291 14 31435116 to 31436430 1314 CpG island CpG island 6291
Gm35907 14 31435201 to 31463624 28423 + lncRNA gene predicted gene, 35907
Tssr124942 14 31435221 to 31435249 28 + TSS region transcription start site region 124942
Tssr127962 14 31436028 to 31436109 81 - TSS region transcription start site region 127962
Tssr127963 14 31436193 to 31436204 11 - TSS region transcription start site region 127963
Gm49252 14 31458828 to 31459225 397 - pseudogene predicted gene, 49252
D14Jor2 14 31459729 to 31460145 416 DNA segment DNA segment, Chr 14, Barbara Jordan 2
Tssr127964 14 31472572 to 31472575 3 - TSS region transcription start site region 127964
Mettl6 14 31473578 to 31495040 21462 - protein coding gene methyltransferase like 6
Tssr127965 14 31494257 to 31494265 8 - TSS region transcription start site region 127965
Tssr124943 14 31494348 to 31494367 19 + TSS region transcription start site region 124943
Cpgi6292 14 31494423 to 31495758 1335 CpG island CpG island 6292
Tssr127966 14 31494960 to 31494985 25 - TSS region transcription start site region 127966
Tssr127967 14 31494992 to 31495054 62 - TSS region transcription start site region 127967
Tssr124944 14 31495065 to 31495095 30 + TSS region transcription start site region 124944
Eaf1 14 31495079 to 31509858 14779 + protein coding gene ELL associated factor 1
Tssr124945 14 31495097 to 31495181 84 + TSS region transcription start site region 124945
Tssr124946 14 31496417 to 31496423 6 + TSS region transcription start site region 124946
Tssr124947 14 31500123 to 31500125 2 + TSS region transcription start site region 124947
Tssr124948 14 31506514 to 31506516 2 + TSS region transcription start site region 124948
Gm49270 14 31511348 to 31512151 803 + unclassified gene predicted gene, 49270
Colq 14 31523082 to 31591343 68261 - protein coding gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Tssr127968 14 31529626 to 31529636 10 - TSS region transcription start site region 127968
Gm24057 14 31536957 to 31537258 301 - unclassified non-coding RNA gene predicted gene, 24057
D14Mit180 14 31541777 to 31541898 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 180
Tssr127969 14 31545783 to 31545791 8 - TSS region transcription start site region 127969
Tssr127970 14 31545818 to 31545827 9 - TSS region transcription start site region 127970
Tssr127971 14 31546034 to 31546037 3 - TSS region transcription start site region 127971
Gm49387 14 31552905 to 31640878 87973 - protein coding gene predicted gene, 49387
Tssr127972 14 31553233 to 31553240 7 - TSS region transcription start site region 127972
Tssr127973 14 31553780 to 31553828 48 - TSS region transcription start site region 127973
Tssr127974 14 31557882 to 31557894 12 - TSS region transcription start site region 127974
Tssr124949 14 31575493 to 31575502 9 + TSS region transcription start site region 124949
Tssr124950 14 31575522 to 31575532 10 + TSS region transcription start site region 124950
Tssr127975 14 31577283 to 31577294 11 - TSS region transcription start site region 127975
Tssr127976 14 31577318 to 31577334 16 - TSS region transcription start site region 127976
Tssr127977 14 31591316 to 31591362 46 - TSS region transcription start site region 127977
Hacl1 14 31607226 to 31640965 33739 - protein coding gene 2-hydroxyacyl-CoA lyase 1
Tssr124951 14 31619003 to 31619011 8 + TSS region transcription start site region 124951
Tssr127978 14 31619034 to 31619043 9 - TSS region transcription start site region 127978
Tssr127979 14 31633687 to 31633699 12 - TSS region transcription start site region 127979
Tssr127980 14 31637738 to 31637744 6 - TSS region transcription start site region 127980
Cpgi6293 14 31640415 to 31641427 1012 CpG island CpG island 6293
Tssr127981 14 31640547 to 31640575 28 - TSS region transcription start site region 127981
Tssr127982 14 31640891 to 31640980 89 - TSS region transcription start site region 127982
Tssr124952 14 31641018 to 31641029 11 + TSS region transcription start site region 124952
Btd 14 31641028 to 31668197 27169 + protein coding gene biotinidase
Tssr124953 14 31641051 to 31641082 31 + TSS region transcription start site region 124953
Tssr127983 14 31641205 to 31641272 67 - TSS region transcription start site region 127983
twit 14 31646980 to 33256349 1609369 heritable phenotypic marker twitter
D14Mit174 14 31646980 to 31647125 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 174
Tssr127984 14 31653273 to 31653279 6 - TSS region transcription start site region 127984
Cpgi6294 14 31661553 to 31662287 734 CpG island CpG island 6294
Tssr124954 14 31665812 to 31665823 11 + TSS region transcription start site region 124954
Tssr124955 14 31671864 to 31671894 30 + TSS region transcription start site region 124955
Cpgi6295 14 31685622 to 31685865 243 CpG island CpG island 6295
Ankrd28 14 31698768 to 31830415 131647 - protein coding gene ankyrin repeat domain 28
Tssr127985 14 31729014 to 31729017 3 - TSS region transcription start site region 127985