Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:31359423-31630758

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capn7 14 31336638 to 31371986 35348 + protein coding gene calpain 7
Tssr127949 14 31369843 to 31369889 46 - TSS region transcription start site region 127949
Sh3bp5 14 31373774 to 31436033 62259 - protein coding gene SH3-domain binding protein 5 (BTK-associated)
Tssr127950 14 31374256 to 31374274 18 - TSS region transcription start site region 127950
Tssr127951 14 31374303 to 31374340 37 - TSS region transcription start site region 127951
Tssr127952 14 31374594 to 31374607 13 - TSS region transcription start site region 127952
Tssr127953 14 31374738 to 31374761 23 - TSS region transcription start site region 127953
Tssr127954 14 31391753 to 31391771 18 - TSS region transcription start site region 127954
Tssr127955 14 31398062 to 31398091 29 - TSS region transcription start site region 127955
Tssr127956 14 31398101 to 31398112 11 - TSS region transcription start site region 127956
Tssr127957 14 31401006 to 31401012 6 - TSS region transcription start site region 127957
Tssr127958 14 31402054 to 31402064 10 - TSS region transcription start site region 127958
Tssr127959 14 31417666 to 31417678 12 - TSS region transcription start site region 127959
Tssr127960 14 31434275 to 31434286 11 - TSS region transcription start site region 127960
Tssr127961 14 31434319 to 31434326 7 - TSS region transcription start site region 127961
Cpgi6291 14 31435116 to 31436430 1314 CpG island CpG island 6291
Gm35907 14 31435201 to 31463624 28423 + lncRNA gene predicted gene, 35907
Tssr124942 14 31435221 to 31435249 28 + TSS region transcription start site region 124942
Tssr127962 14 31436028 to 31436109 81 - TSS region transcription start site region 127962
Tssr127963 14 31436193 to 31436204 11 - TSS region transcription start site region 127963
Gm49252 14 31458828 to 31459225 397 - pseudogene predicted gene, 49252
D14Jor2 14 31459729 to 31460145 416 DNA segment DNA segment, Chr 14, Barbara Jordan 2
Tssr127964 14 31472572 to 31472575 3 - TSS region transcription start site region 127964
Mettl6 14 31473578 to 31495040 21462 - protein coding gene methyltransferase like 6
Tssr127965 14 31494257 to 31494265 8 - TSS region transcription start site region 127965
Tssr124943 14 31494348 to 31494367 19 + TSS region transcription start site region 124943
Cpgi6292 14 31494423 to 31495758 1335 CpG island CpG island 6292
Tssr127966 14 31494960 to 31494985 25 - TSS region transcription start site region 127966
Tssr127967 14 31494992 to 31495054 62 - TSS region transcription start site region 127967
Tssr124944 14 31495065 to 31495095 30 + TSS region transcription start site region 124944
Eaf1 14 31495079 to 31509858 14779 + protein coding gene ELL associated factor 1
Tssr124945 14 31495097 to 31495181 84 + TSS region transcription start site region 124945
Tssr124946 14 31496417 to 31496423 6 + TSS region transcription start site region 124946
Tssr124947 14 31500123 to 31500125 2 + TSS region transcription start site region 124947
Tssr124948 14 31506514 to 31506516 2 + TSS region transcription start site region 124948
Gm49270 14 31511348 to 31512151 803 + unclassified gene predicted gene, 49270
Colq 14 31523082 to 31591343 68261 - protein coding gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Tssr127968 14 31529626 to 31529636 10 - TSS region transcription start site region 127968
Gm24057 14 31536957 to 31537258 301 - unclassified non-coding RNA gene predicted gene, 24057
D14Mit180 14 31541777 to 31541898 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 180
Tssr127969 14 31545783 to 31545791 8 - TSS region transcription start site region 127969
Tssr127970 14 31545818 to 31545827 9 - TSS region transcription start site region 127970
Tssr127971 14 31546034 to 31546037 3 - TSS region transcription start site region 127971
Gm49387 14 31552905 to 31640878 87973 - protein coding gene predicted gene, 49387
Tssr127972 14 31553233 to 31553240 7 - TSS region transcription start site region 127972
Tssr127973 14 31553780 to 31553828 48 - TSS region transcription start site region 127973
Tssr127974 14 31557882 to 31557894 12 - TSS region transcription start site region 127974
Tssr124949 14 31575493 to 31575502 9 + TSS region transcription start site region 124949
Tssr124950 14 31575522 to 31575532 10 + TSS region transcription start site region 124950
Tssr127975 14 31577283 to 31577294 11 - TSS region transcription start site region 127975
Tssr127976 14 31577318 to 31577334 16 - TSS region transcription start site region 127976
Tssr127977 14 31591316 to 31591362 46 - TSS region transcription start site region 127977
Hacl1 14 31607226 to 31640965 33739 - protein coding gene 2-hydroxyacyl-CoA lyase 1
Tssr124951 14 31619003 to 31619011 8 + TSS region transcription start site region 124951
Tssr127978 14 31619034 to 31619043 9 - TSS region transcription start site region 127978