Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:31209843-31529889

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnnc1 14 31208312 to 31211711 3399 + protein coding gene troponin C, cardiac/slow skeletal
Tssr124935 14 31210677 to 31210685 8 + TSS region transcription start site region 124935
Tssr4366 14 31210748 to 31210759 11 + TSS region transcription start site region 4366
Tssr124936 14 31217850 to 31217866 16 + TSS region transcription start site region 124936
Sema3g 14 31217873 to 31230352 12479 + protein coding gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
Phf7 14 31237689 to 31251317 13628 - protein coding gene PHD finger protein 7
Tssr127943 14 31240373 to 31240386 13 - TSS region transcription start site region 127943
Cpgi6286 14 31250652 to 31251974 1322 CpG island CpG island 6286
Tssr127944 14 31251019 to 31251020 1 - TSS region transcription start site region 127944
Tssr127945 14 31251194 to 31251348 154 - TSS region transcription start site region 127945
Bap1 14 31251454 to 31259930 8476 + protein coding gene Brca1 associated protein 1
Tssr124937 14 31251454 to 31251530 76 + TSS region transcription start site region 124937
Tssr124938 14 31255580 to 31255628 48 + TSS region transcription start site region 124938
Dnah1 14 31260375 to 31323896 63521 - protein coding gene dynein, axonemal, heavy chain 1
Gm35823 14 31267869 to 31320011 52142 + antisense lncRNA gene predicted gene, 35823
Tssr4367 14 31267909 to 31267923 14 + TSS region transcription start site region 4367
Cpgi6287 14 31269444 to 31269896 452 CpG island CpG island 6287
Tssr127946 14 31269498 to 31269560 62 - TSS region transcription start site region 127946
Cpgi6288 14 31310822 to 31311019 197 CpG island CpG island 6288
Cpgi6289 14 31323755 to 31324077 322 CpG island CpG island 6289
Tssr127947 14 31323884 to 31323929 45 - TSS region transcription start site region 127947
Tssr127948 14 31323930 to 31323950 20 - TSS region transcription start site region 127948
Gm49217 14 31323955 to 31336076 12121 + lincRNA gene predicted gene, 49217
Gm49791 14 31325519 to 31326006 487 - lincRNA gene predicted gene, 49791
Cpgi6290 14 31336347 to 31337276 929 CpG island CpG island 6290
Tssr124939 14 31336633 to 31336656 23 + TSS region transcription start site region 124939
Capn7 14 31336638 to 31371986 35348 + protein coding gene calpain 7
Tssr124940 14 31336658 to 31336719 61 + TSS region transcription start site region 124940
Tssr124941 14 31336795 to 31336806 11 + TSS region transcription start site region 124941
Tssr127949 14 31369843 to 31369889 46 - TSS region transcription start site region 127949
Sh3bp5 14 31373774 to 31436033 62259 - protein coding gene SH3-domain binding protein 5 (BTK-associated)
Tssr127950 14 31374256 to 31374274 18 - TSS region transcription start site region 127950
Tssr127951 14 31374303 to 31374340 37 - TSS region transcription start site region 127951
Tssr127952 14 31374594 to 31374607 13 - TSS region transcription start site region 127952
Tssr127953 14 31374738 to 31374761 23 - TSS region transcription start site region 127953
Tssr127954 14 31391753 to 31391771 18 - TSS region transcription start site region 127954
Tssr127955 14 31398062 to 31398091 29 - TSS region transcription start site region 127955
Tssr127956 14 31398101 to 31398112 11 - TSS region transcription start site region 127956
Tssr127957 14 31401006 to 31401012 6 - TSS region transcription start site region 127957
Tssr127958 14 31402054 to 31402064 10 - TSS region transcription start site region 127958
Tssr127959 14 31417666 to 31417678 12 - TSS region transcription start site region 127959
Tssr127960 14 31434275 to 31434286 11 - TSS region transcription start site region 127960
Tssr127961 14 31434319 to 31434326 7 - TSS region transcription start site region 127961
Cpgi6291 14 31435116 to 31436430 1314 CpG island CpG island 6291
Gm35907 14 31435201 to 31463624 28423 + lncRNA gene predicted gene, 35907
Tssr124942 14 31435221 to 31435249 28 + TSS region transcription start site region 124942
Tssr127962 14 31436028 to 31436109 81 - TSS region transcription start site region 127962
Tssr127963 14 31436193 to 31436204 11 - TSS region transcription start site region 127963
Gm49252 14 31458828 to 31459225 397 - pseudogene predicted gene, 49252
D14Jor2 14 31459729 to 31460145 416 DNA segment DNA segment, Chr 14, Barbara Jordan 2
Tssr127964 14 31472572 to 31472575 3 - TSS region transcription start site region 127964
Mettl6 14 31473578 to 31495040 21462 - protein coding gene methyltransferase like 6
Tssr127965 14 31494257 to 31494265 8 - TSS region transcription start site region 127965
Tssr124943 14 31494348 to 31494367 19 + TSS region transcription start site region 124943
Cpgi6292 14 31494423 to 31495758 1335 CpG island CpG island 6292
Tssr127966 14 31494960 to 31494985 25 - TSS region transcription start site region 127966
Tssr127967 14 31494992 to 31495054 62 - TSS region transcription start site region 127967
Tssr124944 14 31495065 to 31495095 30 + TSS region transcription start site region 124944
Eaf1 14 31495079 to 31509858 14779 + protein coding gene ELL associated factor 1
Tssr124945 14 31495097 to 31495181 84 + TSS region transcription start site region 124945
Tssr124946 14 31496417 to 31496423 6 + TSS region transcription start site region 124946
Tssr124947 14 31500123 to 31500125 2 + TSS region transcription start site region 124947
Tssr124948 14 31506514 to 31506516 2 + TSS region transcription start site region 124948
Gm49270 14 31511348 to 31512151 803 + unclassified gene predicted gene, 49270
Colq 14 31523082 to 31591343 68261 - protein coding gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Tssr127968 14 31529626 to 31529636 10 - TSS region transcription start site region 127968