Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30931450-31579944

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186 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itih1 14 30929180 to 30943289 14109 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 1
Tssr127904 14 30938068 to 30938090 22 - TSS region transcription start site region 127904
Tssr127905 14 30943275 to 30943294 19 - TSS region transcription start site region 127905
Gm41121 14 30950432 to 30951287 855 - lncRNA gene predicted gene, 41121
Cpgi6278 14 30951045 to 30951947 902 CpG island CpG island 6278
Tssr127906 14 30951255 to 30951289 34 - TSS region transcription start site region 127906
Nek4 14 30951377 to 30988821 37444 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 4
Tssr124896 14 30951406 to 30951415 9 + TSS region transcription start site region 124896
Tssr124897 14 30951431 to 30951450 19 + TSS region transcription start site region 124897
Tssr124898 14 30951452 to 30951469 17 + TSS region transcription start site region 124898
Tssr124899 14 30951487 to 30951510 23 + TSS region transcription start site region 124899
Tssr124900 14 30951531 to 30951542 11 + TSS region transcription start site region 124900
Spcs1 14 30999826 to 31001666 1840 - protein coding gene signal peptidase complex subunit 1 homolog (S. cerevisiae)
Tssr127907 14 31000963 to 31000976 13 - TSS region transcription start site region 127907
Tssr127908 14 31001010 to 31001037 27 - TSS region transcription start site region 127908
Cpgi6279 14 31001073 to 31002202 1129 CpG island CpG island 6279
Tssr127909 14 31001311 to 31001388 77 - TSS region transcription start site region 127909
Tssr124901 14 31001383 to 31001407 24 + TSS region transcription start site region 124901
Glt8d1 14 31001400 to 31011991 10591 + protein coding gene glycosyltransferase 8 domain containing 1
Tssr124902 14 31001414 to 31001464 50 + TSS region transcription start site region 124902
Tssr127910 14 31001532 to 31001587 55 - TSS region transcription start site region 127910
Tssr127911 14 31001588 to 31001620 32 - TSS region transcription start site region 127911
Tssr124903 14 31001602 to 31001628 26 + TSS region transcription start site region 124903
Tssr124904 14 31001630 to 31001713 83 + TSS region transcription start site region 124904
Tssr124905 14 31001843 to 31001920 77 + TSS region transcription start site region 124905
Tssr4364 14 31001939 to 31001950 11 + TSS region transcription start site region 4364
Gnl3 14 31012433 to 31019131 6698 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)
Tssr127912 14 31014227 to 31014231 4 - TSS region transcription start site region 127912
Snord69 14 31014293 to 31014351 58 - snoRNA gene small nucleolar RNA, C/D box 69
Tssr127913 14 31014356 to 31014360 4 - TSS region transcription start site region 127913
Gm24916 14 31015148 to 31015226 78 - snoRNA gene predicted gene, 24916
Snord19 14 31016219 to 31016272 53 - snoRNA gene small nucleolar RNA, C/D box 19
Cpgi6280 14 31018666 to 31019655 989 CpG island CpG island 6280
Tssr127914 14 31019004 to 31019042 38 - TSS region transcription start site region 127914
Tssr127915 14 31019055 to 31019069 14 - TSS region transcription start site region 127915
Tssr124906 14 31019125 to 31019157 32 + TSS region transcription start site region 124906
Pbrm1 14 31019138 to 31121592 102454 + protein coding gene polybromo 1
Tssr124907 14 31019159 to 31019178 19 + TSS region transcription start site region 124907
Tssr124908 14 31019183 to 31019214 31 + TSS region transcription start site region 124908
Tssr127916 14 31019345 to 31019411 66 - TSS region transcription start site region 127916
Tssr124909 14 31019439 to 31019506 67 + TSS region transcription start site region 124909
Tssr124910 14 31019700 to 31019704 4 + TSS region transcription start site region 124910
Tssr124911 14 31030640 to 31030645 5 + TSS region transcription start site region 124911
Gm49094 14 31042317 to 31043120 803 - pseudogene predicted gene, 49094
Tssr124912 14 31072159 to 31072163 4 + TSS region transcription start site region 124912
Gm5459 14 31076638 to 31077435 797 - pseudogene predicted gene 5459
Smim4 14 31088127 to 31128930 40803 - protein coding gene small integral membrane protein 4
Tssr124913 14 31093500 to 31093504 4 + TSS region transcription start site region 124913
Tssr124914 14 31118784 to 31118788 4 + TSS region transcription start site region 124914
Cpgi6281 14 31128497 to 31129289 792 CpG island CpG island 6281
Tssr127917 14 31128885 to 31128923 38 - TSS region transcription start site region 127917
Tssr127918 14 31128924 to 31128960 36 - TSS region transcription start site region 127918
B930019K04Rik 14 31129858 to 31131752 1894 unclassified gene RIKEN cDNA B930019K04 gene
Cpgi6282 14 31130438 to 31131810 1372 CpG island CpG island 6282
Tssr124915 14 31131053 to 31131062 9 + TSS region transcription start site region 124915
Nt5dc2 14 31131053 to 31139124 8071 + protein coding gene 5'-nucleotidase domain containing 2
Tssr124916 14 31131079 to 31131111 32 + TSS region transcription start site region 124916
Tssr124917 14 31131115 to 31131120 5 + TSS region transcription start site region 124917
Tssr124918 14 31134730 to 31134765 35 + TSS region transcription start site region 124918
Tssr124919 14 31135702 to 31135722 20 + TSS region transcription start site region 124919
Tssr124920 14 31138061 to 31138086 25 + TSS region transcription start site region 124920
Cpgi6283 14 31138154 to 31138367 213 CpG island CpG island 6283
Tssr124921 14 31138325 to 31138348 23 + TSS region transcription start site region 124921
Tssr124922 14 31138358 to 31138375 17 + TSS region transcription start site region 124922
Tssr124923 14 31138811 to 31138847 36 + TSS region transcription start site region 124923
Stab1 14 31139013 to 31168641 29628 - protein coding gene stabilin 1
Tssr124924 14 31139015 to 31139024 9 + TSS region transcription start site region 124924
Tssr127919 14 31155543 to 31155567 24 - TSS region transcription start site region 127919
Tssr127920 14 31155724 to 31155729 5 - TSS region transcription start site region 127920
Tssr127921 14 31156123 to 31156139 16 - TSS region transcription start site region 127921
Tssr127922 14 31160035 to 31160074 39 - TSS region transcription start site region 127922
Tssr127923 14 31160307 to 31160339 32 - TSS region transcription start site region 127923
Tssr127924 14 31160546 to 31160557 11 - TSS region transcription start site region 127924
Tssr127925 14 31160561 to 31160620 59 - TSS region transcription start site region 127925
Tssr127926 14 31160626 to 31160639 13 - TSS region transcription start site region 127926
Tssr127927 14 31160651 to 31160664 13 - TSS region transcription start site region 127927
Tssr124925 14 31160681 to 31160692 11 + TSS region transcription start site region 124925
Tssr124926 14 31160729 to 31160746 17 + TSS region transcription start site region 124926
Tssr124927 14 31160758 to 31160765 7 + TSS region transcription start site region 124927
Tssr127928 14 31162184 to 31162214 30 - TSS region transcription start site region 127928
Tssr127929 14 31162495 to 31162506 11 - TSS region transcription start site region 127929
Tssr127930 14 31163435 to 31163450 15 - TSS region transcription start site region 127930
Tssr127931 14 31163850 to 31163861 11 - TSS region transcription start site region 127931
Tssr127932 14 31163922 to 31163938 16 - TSS region transcription start site region 127932
Tssr124928 14 31166517 to 31166530 13 + TSS region transcription start site region 124928
Tssr124929 14 31166538 to 31166553 15 + TSS region transcription start site region 124929
Tssr124930 14 31167950 to 31167958 8 + TSS region transcription start site region 124930
Tssr127933 14 31168557 to 31168568 11 - TSS region transcription start site region 127933
Tssr127934 14 31168587 to 31168606 19 - TSS region transcription start site region 127934
Nisch 14 31170928 to 31206826 35898 - protein coding gene nischarin
Cpgi6284 14 31176689 to 31177138 449 CpG island CpG island 6284
Tssr127935 14 31182768 to 31182778 10 - TSS region transcription start site region 127935
Tssr127936 14 31182787 to 31182835 48 - TSS region transcription start site region 127936
Acigg10 14 31183419 to 66978401 35794982 QTL anti COL7 IgG2b antibody 10
Tssr127937 14 31184974 to 31185010 36 - TSS region transcription start site region 127937
Tssr4365 14 31187125 to 31187145 20 - TSS region transcription start site region 4365
Tssr127938 14 31188733 to 31188759 26 - TSS region transcription start site region 127938
Tssr127939 14 31188765 to 31188777 12 - TSS region transcription start site region 127939
Tssr127940 14 31188837 to 31188848 11 - TSS region transcription start site region 127940
Cpgi6285 14 31205841 to 31207198 1357 CpG island CpG island 6285
Tssr127941 14 31206666 to 31206709 43 - TSS region transcription start site region 127941
Tssr127942 14 31206782 to 31206815 33 - TSS region transcription start site region 127942
D14Mit13 14 31207816 to 31207956 140 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 13
Tssr124931 14 31208309 to 31208325 16 + TSS region transcription start site region 124931
Tnnc1 14 31208312 to 31211711 3399 + protein coding gene troponin C, cardiac/slow skeletal
Tssr124932 14 31209415 to 31209426 11 + TSS region transcription start site region 124932
Tssr124933 14 31209431 to 31209442 11 + TSS region transcription start site region 124933
Tssr124934 14 31209461 to 31209486 25 + TSS region transcription start site region 124934
Tssr124935 14 31210677 to 31210685 8 + TSS region transcription start site region 124935
Tssr4366 14 31210748 to 31210759 11 + TSS region transcription start site region 4366
Tssr124936 14 31217850 to 31217866 16 + TSS region transcription start site region 124936
Sema3g 14 31217873 to 31230352 12479 + protein coding gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
Phf7 14 31237689 to 31251317 13628 - protein coding gene PHD finger protein 7
Tssr127943 14 31240373 to 31240386 13 - TSS region transcription start site region 127943
Cpgi6286 14 31250652 to 31251974 1322 CpG island CpG island 6286
Tssr127944 14 31251019 to 31251020 1 - TSS region transcription start site region 127944
Tssr127945 14 31251194 to 31251348 154 - TSS region transcription start site region 127945
Tssr124937 14 31251454 to 31251530 76 + TSS region transcription start site region 124937
Bap1 14 31251454 to 31259930 8476 + protein coding gene Brca1 associated protein 1
Tssr124938 14 31255580 to 31255628 48 + TSS region transcription start site region 124938
Dnah1 14 31260375 to 31323896 63521 - protein coding gene dynein, axonemal, heavy chain 1
Gm35823 14 31267869 to 31320011 52142 + antisense lncRNA gene predicted gene, 35823
Tssr4367 14 31267909 to 31267923 14 + TSS region transcription start site region 4367
Cpgi6287 14 31269444 to 31269896 452 CpG island CpG island 6287
Tssr127946 14 31269498 to 31269560 62 - TSS region transcription start site region 127946
Cpgi6288 14 31310822 to 31311019 197 CpG island CpG island 6288
Cpgi6289 14 31323755 to 31324077 322 CpG island CpG island 6289
Tssr127947 14 31323884 to 31323929 45 - TSS region transcription start site region 127947
Tssr127948 14 31323930 to 31323950 20 - TSS region transcription start site region 127948
Gm49217 14 31323955 to 31336076 12121 + lincRNA gene predicted gene, 49217
Gm49791 14 31325519 to 31326006 487 - lincRNA gene predicted gene, 49791
Cpgi6290 14 31336347 to 31337276 929 CpG island CpG island 6290
Tssr124939 14 31336633 to 31336656 23 + TSS region transcription start site region 124939
Capn7 14 31336638 to 31371986 35348 + protein coding gene calpain 7
Tssr124940 14 31336658 to 31336719 61 + TSS region transcription start site region 124940
Tssr124941 14 31336795 to 31336806 11 + TSS region transcription start site region 124941
Tssr127949 14 31369843 to 31369889 46 - TSS region transcription start site region 127949
Sh3bp5 14 31373774 to 31436033 62259 - protein coding gene SH3-domain binding protein 5 (BTK-associated)
Tssr127950 14 31374256 to 31374274 18 - TSS region transcription start site region 127950
Tssr127951 14 31374303 to 31374340 37 - TSS region transcription start site region 127951
Tssr127952 14 31374594 to 31374607 13 - TSS region transcription start site region 127952
Tssr127953 14 31374738 to 31374761 23 - TSS region transcription start site region 127953
Tssr127954 14 31391753 to 31391771 18 - TSS region transcription start site region 127954
Tssr127955 14 31398062 to 31398091 29 - TSS region transcription start site region 127955
Tssr127956 14 31398101 to 31398112 11 - TSS region transcription start site region 127956
Tssr127957 14 31401006 to 31401012 6 - TSS region transcription start site region 127957
Tssr127958 14 31402054 to 31402064 10 - TSS region transcription start site region 127958
Tssr127959 14 31417666 to 31417678 12 - TSS region transcription start site region 127959
Tssr127960 14 31434275 to 31434286 11 - TSS region transcription start site region 127960
Tssr127961 14 31434319 to 31434326 7 - TSS region transcription start site region 127961
Cpgi6291 14 31435116 to 31436430 1314 CpG island CpG island 6291
Gm35907 14 31435201 to 31463624 28423 + lncRNA gene predicted gene, 35907
Tssr124942 14 31435221 to 31435249 28 + TSS region transcription start site region 124942
Tssr127962 14 31436028 to 31436109 81 - TSS region transcription start site region 127962
Tssr127963 14 31436193 to 31436204 11 - TSS region transcription start site region 127963
Gm49252 14 31458828 to 31459225 397 - pseudogene predicted gene, 49252
D14Jor2 14 31459729 to 31460145 416 DNA segment DNA segment, Chr 14, Barbara Jordan 2
Tssr127964 14 31472572 to 31472575 3 - TSS region transcription start site region 127964
Mettl6 14 31473578 to 31495040 21462 - protein coding gene methyltransferase like 6
Tssr127965 14 31494257 to 31494265 8 - TSS region transcription start site region 127965
Tssr124943 14 31494348 to 31494367 19 + TSS region transcription start site region 124943
Cpgi6292 14 31494423 to 31495758 1335 CpG island CpG island 6292
Tssr127966 14 31494960 to 31494985 25 - TSS region transcription start site region 127966
Tssr127967 14 31494992 to 31495054 62 - TSS region transcription start site region 127967
Tssr124944 14 31495065 to 31495095 30 + TSS region transcription start site region 124944
Eaf1 14 31495079 to 31509858 14779 + protein coding gene ELL associated factor 1
Tssr124945 14 31495097 to 31495181 84 + TSS region transcription start site region 124945
Tssr124946 14 31496417 to 31496423 6 + TSS region transcription start site region 124946
Tssr124947 14 31500123 to 31500125 2 + TSS region transcription start site region 124947
Tssr124948 14 31506514 to 31506516 2 + TSS region transcription start site region 124948
Gm49270 14 31511348 to 31512151 803 + unclassified gene predicted gene, 49270
Colq 14 31523082 to 31591343 68261 - protein coding gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Tssr127968 14 31529626 to 31529636 10 - TSS region transcription start site region 127968
Gm24057 14 31536957 to 31537258 301 - unclassified non-coding RNA gene predicted gene, 24057
D14Mit180 14 31541777 to 31541898 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 180
Tssr127969 14 31545783 to 31545791 8 - TSS region transcription start site region 127969
Tssr127970 14 31545818 to 31545827 9 - TSS region transcription start site region 127970
Tssr127971 14 31546034 to 31546037 3 - TSS region transcription start site region 127971
Gm49387 14 31552905 to 31640878 87973 - protein coding gene predicted gene, 49387
Tssr127972 14 31553233 to 31553240 7 - TSS region transcription start site region 127972
Tssr127973 14 31553780 to 31553828 48 - TSS region transcription start site region 127973
Tssr127974 14 31557882 to 31557894 12 - TSS region transcription start site region 127974
Tssr124949 14 31575493 to 31575502 9 + TSS region transcription start site region 124949
Tssr124950 14 31575522 to 31575532 10 + TSS region transcription start site region 124950
Tssr127975 14 31577283 to 31577294 11 - TSS region transcription start site region 127975
Tssr127976 14 31577318 to 31577334 16 - TSS region transcription start site region 127976