Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30919439-31119506

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itih3 14 30908572 to 30923755 15183 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 3
Tssr127899 14 30920741 to 30920751 10 - TSS region transcription start site region 127899
Tssr127900 14 30921739 to 30921763 24 - TSS region transcription start site region 127900
Tssr127901 14 30921977 to 30921992 15 - TSS region transcription start site region 127901
Tssr127902 14 30923547 to 30923565 18 - TSS region transcription start site region 127902
Tssr127903 14 30923754 to 30923765 11 - TSS region transcription start site region 127903
Itih1 14 30929180 to 30943289 14109 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 1
Tssr127904 14 30938068 to 30938090 22 - TSS region transcription start site region 127904
Tssr127905 14 30943275 to 30943294 19 - TSS region transcription start site region 127905
Gm41121 14 30950432 to 30951287 855 - lncRNA gene predicted gene, 41121
Cpgi6278 14 30951045 to 30951947 902 CpG island CpG island 6278
Tssr127906 14 30951255 to 30951289 34 - TSS region transcription start site region 127906
Nek4 14 30951377 to 30988821 37444 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 4
Tssr124896 14 30951406 to 30951415 9 + TSS region transcription start site region 124896
Tssr124897 14 30951431 to 30951450 19 + TSS region transcription start site region 124897
Tssr124898 14 30951452 to 30951469 17 + TSS region transcription start site region 124898
Tssr124899 14 30951487 to 30951510 23 + TSS region transcription start site region 124899
Tssr124900 14 30951531 to 30951542 11 + TSS region transcription start site region 124900
Spcs1 14 30999826 to 31001666 1840 - protein coding gene signal peptidase complex subunit 1 homolog (S. cerevisiae)
Tssr127907 14 31000963 to 31000976 13 - TSS region transcription start site region 127907
Tssr127908 14 31001010 to 31001037 27 - TSS region transcription start site region 127908
Cpgi6279 14 31001073 to 31002202 1129 CpG island CpG island 6279
Tssr127909 14 31001311 to 31001388 77 - TSS region transcription start site region 127909
Tssr124901 14 31001383 to 31001407 24 + TSS region transcription start site region 124901
Glt8d1 14 31001400 to 31011991 10591 + protein coding gene glycosyltransferase 8 domain containing 1
Tssr124902 14 31001414 to 31001464 50 + TSS region transcription start site region 124902
Tssr127910 14 31001532 to 31001587 55 - TSS region transcription start site region 127910
Tssr127911 14 31001588 to 31001620 32 - TSS region transcription start site region 127911
Tssr124903 14 31001602 to 31001628 26 + TSS region transcription start site region 124903
Tssr124904 14 31001630 to 31001713 83 + TSS region transcription start site region 124904
Tssr124905 14 31001843 to 31001920 77 + TSS region transcription start site region 124905
Tssr4364 14 31001939 to 31001950 11 + TSS region transcription start site region 4364
Gnl3 14 31012433 to 31019131 6698 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)
Tssr127912 14 31014227 to 31014231 4 - TSS region transcription start site region 127912
Snord69 14 31014293 to 31014351 58 - snoRNA gene small nucleolar RNA, C/D box 69
Tssr127913 14 31014356 to 31014360 4 - TSS region transcription start site region 127913
Gm24916 14 31015148 to 31015226 78 - snoRNA gene predicted gene, 24916
Snord19 14 31016219 to 31016272 53 - snoRNA gene small nucleolar RNA, C/D box 19
Cpgi6280 14 31018666 to 31019655 989 CpG island CpG island 6280
Tssr127914 14 31019004 to 31019042 38 - TSS region transcription start site region 127914
Tssr127915 14 31019055 to 31019069 14 - TSS region transcription start site region 127915
Tssr124906 14 31019125 to 31019157 32 + TSS region transcription start site region 124906
Pbrm1 14 31019138 to 31121592 102454 + protein coding gene polybromo 1
Tssr124907 14 31019159 to 31019178 19 + TSS region transcription start site region 124907
Tssr124908 14 31019183 to 31019214 31 + TSS region transcription start site region 124908
Tssr127916 14 31019345 to 31019411 66 - TSS region transcription start site region 127916
Tssr124909 14 31019439 to 31019506 67 + TSS region transcription start site region 124909
Tssr124910 14 31019700 to 31019704 4 + TSS region transcription start site region 124910
Tssr124911 14 31030640 to 31030645 5 + TSS region transcription start site region 124911
Gm49094 14 31042317 to 31043120 803 - pseudogene predicted gene, 49094
Tssr124912 14 31072159 to 31072163 4 + TSS region transcription start site region 124912
Gm5459 14 31076638 to 31077435 797 - pseudogene predicted gene 5459
Smim4 14 31088127 to 31128930 40803 - protein coding gene small integral membrane protein 4
Tssr124913 14 31093500 to 31093504 4 + TSS region transcription start site region 124913
Tssr124914 14 31118784 to 31118788 4 + TSS region transcription start site region 124914