Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30661957-32412258

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378 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rft1 14 30654360 to 30691317 36957 + protein coding gene RFT1 homolog
Tssr124848 14 30677273 to 30677278 5 + TSS region transcription start site region 124848
Cpgi6276 14 30714793 to 30716865 2072 CpG island CpG island 6276
Sfmbt1 14 30714849 to 30822721 107872 + protein coding gene Scm-like with four mbt domains 1
Tssr124849 14 30715599 to 30715641 42 + TSS region transcription start site region 124849
Tssr124850 14 30715646 to 30715664 18 + TSS region transcription start site region 124850
Tssr124851 14 30715688 to 30715741 53 + TSS region transcription start site region 124851
Tssr124852 14 30715782 to 30715794 12 + TSS region transcription start site region 124852
Tssr124853 14 30716377 to 30716415 38 + TSS region transcription start site region 124853
Tssr124854 14 30716878 to 30716882 4 + TSS region transcription start site region 124854
Tssr127889 14 30716923 to 30716955 32 - TSS region transcription start site region 127889
Tssr124855 14 30719828 to 30719832 4 + TSS region transcription start site region 124855
Tssr124856 14 30732877 to 30732882 5 + TSS region transcription start site region 124856
Tssr124857 14 30743803 to 30743808 5 + TSS region transcription start site region 124857
1700087M22Rik 14 30770681 to 30778004 7323 - antisense lncRNA gene RIKEN cDNA 1700087M22 gene
Gm15667 14 30804379 to 30805160 781 + pseudogene predicted gene 15667
Tssr124858 14 30819172 to 30819197 25 + TSS region transcription start site region 124858
Cpgi6277 14 30825285 to 30826323 1038 CpG island CpG island 6277
Tssr124859 14 30825568 to 30825574 6 + TSS region transcription start site region 124859
Tssr124860 14 30825580 to 30825640 60 + TSS region transcription start site region 124860
Stimate 14 30825594 to 30877210 51616 + protein coding gene STIM activating enhancer
Tssr124861 14 30825657 to 30825665 8 + TSS region transcription start site region 124861
Tssr124862 14 30825667 to 30825677 10 + TSS region transcription start site region 124862
Tssr124863 14 30825825 to 30825857 32 + TSS region transcription start site region 124863
Tssr124864 14 30870628 to 30870633 5 + TSS region transcription start site region 124864
Tssr124865 14 30870635 to 30870646 11 + TSS region transcription start site region 124865
Tssr124866 14 30870662 to 30870668 6 + TSS region transcription start site region 124866
Mustn1 14 30879257 to 30881610 2353 + protein coding gene musculoskeletal, embryonic nuclear protein 1
Tssr124867 14 30879316 to 30879327 11 + TSS region transcription start site region 124867
Tssr124868 14 30879533 to 30879549 16 + TSS region transcription start site region 124868
Tssr124869 14 30880114 to 30880146 32 + TSS region transcription start site region 124869
Tssr124870 14 30880248 to 30880257 9 + TSS region transcription start site region 124870
Tssr124871 14 30880442 to 30880453 11 + TSS region transcription start site region 124871
Tssr124872 14 30880486 to 30880499 13 + TSS region transcription start site region 124872
Tssr124873 14 30881085 to 30881100 15 + TSS region transcription start site region 124873
Tssr124874 14 30886411 to 30886424 13 + TSS region transcription start site region 124874
Tssr124875 14 30886458 to 30886483 25 + TSS region transcription start site region 124875
Itih4 14 30886476 to 30901986 15510 + protein coding gene inter alpha-trypsin inhibitor, heavy chain 4
Tssr124876 14 30886493 to 30886510 17 + TSS region transcription start site region 124876
Tssr124877 14 30886521 to 30886532 11 + TSS region transcription start site region 124877
Tssr124878 14 30889612 to 30889623 11 + TSS region transcription start site region 124878
Tssr124879 14 30889894 to 30889904 10 + TSS region transcription start site region 124879
Tssr124880 14 30890161 to 30890169 8 + TSS region transcription start site region 124880
Tssr124881 14 30890644 to 30890670 26 + TSS region transcription start site region 124881
Tssr127890 14 30890689 to 30890733 44 - TSS region transcription start site region 127890
Tssr124882 14 30891399 to 30891417 18 + TSS region transcription start site region 124882
Tssr124883 14 30891706 to 30891746 40 + TSS region transcription start site region 124883
Tssr124884 14 30892031 to 30892052 21 + TSS region transcription start site region 124884
Tssr124885 14 30892338 to 30892357 19 + TSS region transcription start site region 124885
Tssr124886 14 30892574 to 30892588 14 + TSS region transcription start site region 124886
Tssr124887 14 30892604 to 30892615 11 + TSS region transcription start site region 124887
Tssr124888 14 30892673 to 30892691 18 + TSS region transcription start site region 124888
Tssr124889 14 30895400 to 30895412 12 + TSS region transcription start site region 124889
Tssr124890 14 30895430 to 30895448 18 + TSS region transcription start site region 124890
Tssr124891 14 30895464 to 30895484 20 + TSS region transcription start site region 124891
Tssr124892 14 30896598 to 30896636 38 + TSS region transcription start site region 124892
Tssr124893 14 30896925 to 30896935 10 + TSS region transcription start site region 124893
Tssr124894 14 30898711 to 30898741 30 + TSS region transcription start site region 124894
Tssr124895 14 30898748 to 30898757 9 + TSS region transcription start site region 124895
Itih3 14 30908572 to 30923755 15183 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 3
Tssr127891 14 30912688 to 30912694 6 - TSS region transcription start site region 127891
Tssr127892 14 30912710 to 30912725 15 - TSS region transcription start site region 127892
Tssr127893 14 30914126 to 30914151 25 - TSS region transcription start site region 127893
Tssr127894 14 30915477 to 30915481 4 - TSS region transcription start site region 127894
Tssr127895 14 30915716 to 30915736 20 - TSS region transcription start site region 127895
Tssr127896 14 30915764 to 30915773 9 - TSS region transcription start site region 127896
Tssr127897 14 30917356 to 30917367 11 - TSS region transcription start site region 127897
Tssr127898 14 30919406 to 30919419 13 - TSS region transcription start site region 127898
Tssr127899 14 30920741 to 30920751 10 - TSS region transcription start site region 127899
Tssr127900 14 30921739 to 30921763 24 - TSS region transcription start site region 127900
Tssr127901 14 30921977 to 30921992 15 - TSS region transcription start site region 127901
Tssr127902 14 30923547 to 30923565 18 - TSS region transcription start site region 127902
Tssr127903 14 30923754 to 30923765 11 - TSS region transcription start site region 127903
Itih1 14 30929180 to 30943289 14109 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 1
Tssr127904 14 30938068 to 30938090 22 - TSS region transcription start site region 127904
Tssr127905 14 30943275 to 30943294 19 - TSS region transcription start site region 127905
Gm41121 14 30950432 to 30951287 855 - lncRNA gene predicted gene, 41121
Cpgi6278 14 30951045 to 30951947 902 CpG island CpG island 6278
Tssr127906 14 30951255 to 30951289 34 - TSS region transcription start site region 127906
Nek4 14 30951377 to 30988821 37444 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 4
Tssr124896 14 30951406 to 30951415 9 + TSS region transcription start site region 124896
Tssr124897 14 30951431 to 30951450 19 + TSS region transcription start site region 124897
Tssr124898 14 30951452 to 30951469 17 + TSS region transcription start site region 124898
Tssr124899 14 30951487 to 30951510 23 + TSS region transcription start site region 124899
Tssr124900 14 30951531 to 30951542 11 + TSS region transcription start site region 124900
Spcs1 14 30999826 to 31001666 1840 - protein coding gene signal peptidase complex subunit 1 homolog (S. cerevisiae)
Tssr127907 14 31000963 to 31000976 13 - TSS region transcription start site region 127907
Tssr127908 14 31001010 to 31001037 27 - TSS region transcription start site region 127908
Cpgi6279 14 31001073 to 31002202 1129 CpG island CpG island 6279
Tssr127909 14 31001311 to 31001388 77 - TSS region transcription start site region 127909
Tssr124901 14 31001383 to 31001407 24 + TSS region transcription start site region 124901
Glt8d1 14 31001400 to 31011991 10591 + protein coding gene glycosyltransferase 8 domain containing 1
Tssr124902 14 31001414 to 31001464 50 + TSS region transcription start site region 124902
Tssr127910 14 31001532 to 31001587 55 - TSS region transcription start site region 127910
Tssr127911 14 31001588 to 31001620 32 - TSS region transcription start site region 127911
Tssr124903 14 31001602 to 31001628 26 + TSS region transcription start site region 124903
Tssr124904 14 31001630 to 31001713 83 + TSS region transcription start site region 124904
Tssr124905 14 31001843 to 31001920 77 + TSS region transcription start site region 124905
Tssr4364 14 31001939 to 31001950 11 + TSS region transcription start site region 4364
Gnl3 14 31012433 to 31019131 6698 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)
Tssr127912 14 31014227 to 31014231 4 - TSS region transcription start site region 127912
Snord69 14 31014293 to 31014351 58 - snoRNA gene small nucleolar RNA, C/D box 69
Tssr127913 14 31014356 to 31014360 4 - TSS region transcription start site region 127913
Gm24916 14 31015148 to 31015226 78 - snoRNA gene predicted gene, 24916
Snord19 14 31016219 to 31016272 53 - snoRNA gene small nucleolar RNA, C/D box 19
Cpgi6280 14 31018666 to 31019655 989 CpG island CpG island 6280
Tssr127914 14 31019004 to 31019042 38 - TSS region transcription start site region 127914
Tssr127915 14 31019055 to 31019069 14 - TSS region transcription start site region 127915
Tssr124906 14 31019125 to 31019157 32 + TSS region transcription start site region 124906
Pbrm1 14 31019138 to 31121592 102454 + protein coding gene polybromo 1
Tssr124907 14 31019159 to 31019178 19 + TSS region transcription start site region 124907
Tssr124908 14 31019183 to 31019214 31 + TSS region transcription start site region 124908
Tssr127916 14 31019345 to 31019411 66 - TSS region transcription start site region 127916
Tssr124909 14 31019439 to 31019506 67 + TSS region transcription start site region 124909
Tssr124910 14 31019700 to 31019704 4 + TSS region transcription start site region 124910
Tssr124911 14 31030640 to 31030645 5 + TSS region transcription start site region 124911
Gm49094 14 31042317 to 31043120 803 - pseudogene predicted gene, 49094
Tssr124912 14 31072159 to 31072163 4 + TSS region transcription start site region 124912
Gm5459 14 31076638 to 31077435 797 - pseudogene predicted gene 5459
Smim4 14 31088127 to 31128930 40803 - protein coding gene small integral membrane protein 4
Tssr124913 14 31093500 to 31093504 4 + TSS region transcription start site region 124913
Tssr124914 14 31118784 to 31118788 4 + TSS region transcription start site region 124914
Cpgi6281 14 31128497 to 31129289 792 CpG island CpG island 6281
Tssr127917 14 31128885 to 31128923 38 - TSS region transcription start site region 127917
Tssr127918 14 31128924 to 31128960 36 - TSS region transcription start site region 127918
B930019K04Rik 14 31129858 to 31131752 1894 unclassified gene RIKEN cDNA B930019K04 gene
Cpgi6282 14 31130438 to 31131810 1372 CpG island CpG island 6282
Tssr124915 14 31131053 to 31131062 9 + TSS region transcription start site region 124915
Nt5dc2 14 31131053 to 31139124 8071 + protein coding gene 5'-nucleotidase domain containing 2
Tssr124916 14 31131079 to 31131111 32 + TSS region transcription start site region 124916
Tssr124917 14 31131115 to 31131120 5 + TSS region transcription start site region 124917
Tssr124918 14 31134730 to 31134765 35 + TSS region transcription start site region 124918
Tssr124919 14 31135702 to 31135722 20 + TSS region transcription start site region 124919
Tssr124920 14 31138061 to 31138086 25 + TSS region transcription start site region 124920
Cpgi6283 14 31138154 to 31138367 213 CpG island CpG island 6283
Tssr124921 14 31138325 to 31138348 23 + TSS region transcription start site region 124921
Tssr124922 14 31138358 to 31138375 17 + TSS region transcription start site region 124922
Tssr124923 14 31138811 to 31138847 36 + TSS region transcription start site region 124923
Stab1 14 31139013 to 31168641 29628 - protein coding gene stabilin 1
Tssr124924 14 31139015 to 31139024 9 + TSS region transcription start site region 124924
Tssr127919 14 31155543 to 31155567 24 - TSS region transcription start site region 127919
Tssr127920 14 31155724 to 31155729 5 - TSS region transcription start site region 127920
Tssr127921 14 31156123 to 31156139 16 - TSS region transcription start site region 127921
Tssr127922 14 31160035 to 31160074 39 - TSS region transcription start site region 127922
Tssr127923 14 31160307 to 31160339 32 - TSS region transcription start site region 127923
Tssr127924 14 31160546 to 31160557 11 - TSS region transcription start site region 127924
Tssr127925 14 31160561 to 31160620 59 - TSS region transcription start site region 127925
Tssr127926 14 31160626 to 31160639 13 - TSS region transcription start site region 127926
Tssr127927 14 31160651 to 31160664 13 - TSS region transcription start site region 127927
Tssr124925 14 31160681 to 31160692 11 + TSS region transcription start site region 124925
Tssr124926 14 31160729 to 31160746 17 + TSS region transcription start site region 124926
Tssr124927 14 31160758 to 31160765 7 + TSS region transcription start site region 124927
Tssr127928 14 31162184 to 31162214 30 - TSS region transcription start site region 127928
Tssr127929 14 31162495 to 31162506 11 - TSS region transcription start site region 127929
Tssr127930 14 31163435 to 31163450 15 - TSS region transcription start site region 127930
Tssr127931 14 31163850 to 31163861 11 - TSS region transcription start site region 127931
Tssr127932 14 31163922 to 31163938 16 - TSS region transcription start site region 127932
Tssr124928 14 31166517 to 31166530 13 + TSS region transcription start site region 124928
Tssr124929 14 31166538 to 31166553 15 + TSS region transcription start site region 124929
Tssr124930 14 31167950 to 31167958 8 + TSS region transcription start site region 124930
Tssr127933 14 31168557 to 31168568 11 - TSS region transcription start site region 127933
Tssr127934 14 31168587 to 31168606 19 - TSS region transcription start site region 127934
Nisch 14 31170928 to 31206826 35898 - protein coding gene nischarin
Cpgi6284 14 31176689 to 31177138 449 CpG island CpG island 6284
Tssr127935 14 31182768 to 31182778 10 - TSS region transcription start site region 127935
Tssr127936 14 31182787 to 31182835 48 - TSS region transcription start site region 127936
Acigg10 14 31183419 to 66978401 35794982 QTL anti COL7 IgG2b antibody 10
Tssr127937 14 31184974 to 31185010 36 - TSS region transcription start site region 127937
Tssr4365 14 31187125 to 31187145 20 - TSS region transcription start site region 4365
Tssr127938 14 31188733 to 31188759 26 - TSS region transcription start site region 127938
Tssr127939 14 31188765 to 31188777 12 - TSS region transcription start site region 127939
Tssr127940 14 31188837 to 31188848 11 - TSS region transcription start site region 127940
Cpgi6285 14 31205841 to 31207198 1357 CpG island CpG island 6285
Tssr127941 14 31206666 to 31206709 43 - TSS region transcription start site region 127941
Tssr127942 14 31206782 to 31206815 33 - TSS region transcription start site region 127942
D14Mit13 14 31207816 to 31207956 140 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 13
Tssr124931 14 31208309 to 31208325 16 + TSS region transcription start site region 124931
Tnnc1 14 31208312 to 31211711 3399 + protein coding gene troponin C, cardiac/slow skeletal
Tssr124932 14 31209415 to 31209426 11 + TSS region transcription start site region 124932
Tssr124933 14 31209431 to 31209442 11 + TSS region transcription start site region 124933
Tssr124934 14 31209461 to 31209486 25 + TSS region transcription start site region 124934
Tssr124935 14 31210677 to 31210685 8 + TSS region transcription start site region 124935
Tssr4366 14 31210748 to 31210759 11 + TSS region transcription start site region 4366
Tssr124936 14 31217850 to 31217866 16 + TSS region transcription start site region 124936
Sema3g 14 31217873 to 31230352 12479 + protein coding gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
Phf7 14 31237689 to 31251317 13628 - protein coding gene PHD finger protein 7
Tssr127943 14 31240373 to 31240386 13 - TSS region transcription start site region 127943
Cpgi6286 14 31250652 to 31251974 1322 CpG island CpG island 6286
Tssr127944 14 31251019 to 31251020 1 - TSS region transcription start site region 127944
Tssr127945 14 31251194 to 31251348 154 - TSS region transcription start site region 127945
Bap1 14 31251454 to 31259930 8476 + protein coding gene Brca1 associated protein 1
Tssr124937 14 31251454 to 31251530 76 + TSS region transcription start site region 124937
Tssr124938 14 31255580 to 31255628 48 + TSS region transcription start site region 124938
Dnah1 14 31260375 to 31323896 63521 - protein coding gene dynein, axonemal, heavy chain 1
Gm35823 14 31267869 to 31320011 52142 + antisense lncRNA gene predicted gene, 35823
Tssr4367 14 31267909 to 31267923 14 + TSS region transcription start site region 4367
Cpgi6287 14 31269444 to 31269896 452 CpG island CpG island 6287
Tssr127946 14 31269498 to 31269560 62 - TSS region transcription start site region 127946
Cpgi6288 14 31310822 to 31311019 197 CpG island CpG island 6288
Cpgi6289 14 31323755 to 31324077 322 CpG island CpG island 6289