Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30415095-30835105

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacna1d 14 30039941 to 30491156 451215 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1D subunit
Cpgi6271 14 30416879 to 30417083 204 CpG island CpG island 6271
Gm18681 14 30423265 to 30423873 608 + pseudogene predicted gene, 18681
Tssr127857 14 30434098 to 30434115 17 - TSS region transcription start site region 127857
4831407H17Rik 14 30458036 to 30463282 5246 + lncRNA gene RIKEN cDNA 4831407H17 gene
Tssr127858 14 30469872 to 30469883 11 - TSS region transcription start site region 127858
Tssr127859 14 30469886 to 30469895 9 - TSS region transcription start site region 127859
Tssr127860 14 30469899 to 30469911 12 - TSS region transcription start site region 127860
Cpgi6272 14 30479255 to 30480115 860 CpG island CpG island 6272
Dcp1a 14 30479535 to 30527063 47528 + protein coding gene decapping mRNA 1A
Tssr124825 14 30479620 to 30479685 65 + TSS region transcription start site region 124825
Gm35566 14 30484594 to 30488591 3997 + lncRNA gene predicted gene, 35566
Tssr124826 14 30485071 to 30485087 16 + TSS region transcription start site region 124826
Tssr4361 14 30485098 to 30485107 9 + TSS region transcription start site region 4361
Tssr127861 14 30491451 to 30491458 7 - TSS region transcription start site region 127861
Tssr127862 14 30491488 to 30491506 18 - TSS region transcription start site region 127862
Cpgi6273 14 30548980 to 30550090 1110 CpG island CpG island 6273
Tkt 14 30549131 to 30574724 25593 + protein coding gene transketolase
Tssr124827 14 30549139 to 30549159 20 + TSS region transcription start site region 124827
Tssr124828 14 30549163 to 30549188 25 + TSS region transcription start site region 124828
Tssr124829 14 30558711 to 30558728 17 + TSS region transcription start site region 124829
Tssr124830 14 30558787 to 30558805 18 + TSS region transcription start site region 124830
Tssr124831 14 30559780 to 30559799 19 + TSS region transcription start site region 124831
Tssr124832 14 30565509 to 30565561 52 + TSS region transcription start site region 124832
Tssr124833 14 30565606 to 30565635 29 + TSS region transcription start site region 124833
Tssr124834 14 30568176 to 30568209 33 + TSS region transcription start site region 124834
Tssr124835 14 30570958 to 30570975 17 + TSS region transcription start site region 124835
Mir3076 14 30572149 to 30572208 59 + miRNA gene microRNA 3076
Tssr127863 14 30573609 to 30573611 2 - TSS region transcription start site region 127863
Tssr124836 14 30593435 to 30593446 11 + TSS region transcription start site region 124836
Prkcd 14 30595354 to 30626210 30856 - protein coding gene protein kinase C, delta
Tssr127864 14 30595709 to 30595727 18 - TSS region transcription start site region 127864
Tssr127865 14 30595748 to 30595782 34 - TSS region transcription start site region 127865
Tssr124837 14 30595986 to 30596002 16 + TSS region transcription start site region 124837
Tssr127866 14 30596542 to 30596546 4 - TSS region transcription start site region 127866
Tssr124838 14 30596641 to 30596659 18 + TSS region transcription start site region 124838
Tssr127867 14 30599364 to 30599383 19 - TSS region transcription start site region 127867
Tssr127868 14 30599417 to 30599432 15 - TSS region transcription start site region 127868
Tssr127869 14 30599486 to 30599500 14 - TSS region transcription start site region 127869
Tssr127870 14 30604936 to 30604983 47 - TSS region transcription start site region 127870
Tssr127871 14 30605166 to 30605175 9 - TSS region transcription start site region 127871
Tssr4362 14 30605841 to 30605909 68 - TSS region transcription start site region 4362
Tssr127872 14 30606697 to 30606713 16 - TSS region transcription start site region 127872
Tssr4363 14 30607769 to 30607774 5 - TSS region transcription start site region 4363
Tssr127873 14 30607779 to 30607804 25 - TSS region transcription start site region 127873
Tssr127874 14 30607808 to 30607821 13 - TSS region transcription start site region 127874
Tssr127875 14 30607823 to 30607824 1 - TSS region transcription start site region 127875
Tssr124839 14 30607911 to 30607923 12 + TSS region transcription start site region 124839
Tssr127876 14 30609145 to 30609177 32 - TSS region transcription start site region 127876
Tssr127877 14 30616851 to 30616861 10 - TSS region transcription start site region 127877
Tssr127878 14 30618133 to 30618135 2 - TSS region transcription start site region 127878
Tssr127879 14 30622161 to 30622168 7 - TSS region transcription start site region 127879
Tssr127880 14 30625033 to 30625062 29 - TSS region transcription start site region 127880
Tssr127881 14 30625095 to 30625105 10 - TSS region transcription start site region 127881
Tssr127882 14 30625126 to 30625137 11 - TSS region transcription start site region 127882
Tssr127883 14 30625143 to 30625158 15 - TSS region transcription start site region 127883
Cpgi6274 14 30625252 to 30626698 1446 CpG island CpG island 6274
Tssr127884 14 30625318 to 30625339 21 - TSS region transcription start site region 127884
Tssr127885 14 30625450 to 30625482 32 - TSS region transcription start site region 127885
Tssr127886 14 30625895 to 30625937 42 - TSS region transcription start site region 127886
Tssr127887 14 30626196 to 30626220 24 - TSS region transcription start site region 127887
Tssr124840 14 30626334 to 30626359 25 + TSS region transcription start site region 124840
Tssr127888 14 30626410 to 30626427 17 - TSS region transcription start site region 127888
Tssr124841 14 30626597 to 30626603 6 + TSS region transcription start site region 124841
Tssr124842 14 30626646 to 30626653 7 + TSS region transcription start site region 124842
Gm46446 14 30628609 to 30639241 10632 + lncRNA gene predicted gene, 46446
Tssr124843 14 30631412 to 30631424 12 + TSS region transcription start site region 124843
Tssr124844 14 30635448 to 30635466 18 + TSS region transcription start site region 124844
Tssr124845 14 30635499 to 30635549 50 + TSS region transcription start site region 124845
Gm7644 14 30636160 to 30654077 17917 + lincRNA gene predicted gene 7644
Cpgi6275 14 30654256 to 30654683 427 CpG island CpG island 6275
Tssr124846 14 30654342 to 30654364 22 + TSS region transcription start site region 124846
Rft1 14 30654360 to 30691317 36957 + protein coding gene RFT1 homolog
Tssr124847 14 30654367 to 30654424 57 + TSS region transcription start site region 124847
Tssr124848 14 30677273 to 30677278 5 + TSS region transcription start site region 124848
Cpgi6276 14 30714793 to 30716865 2072 CpG island CpG island 6276
Sfmbt1 14 30714849 to 30822721 107872 + protein coding gene Scm-like with four mbt domains 1
Tssr124849 14 30715599 to 30715641 42 + TSS region transcription start site region 124849
Tssr124850 14 30715646 to 30715664 18 + TSS region transcription start site region 124850
Tssr124851 14 30715688 to 30715741 53 + TSS region transcription start site region 124851
Tssr124852 14 30715782 to 30715794 12 + TSS region transcription start site region 124852
Tssr124853 14 30716377 to 30716415 38 + TSS region transcription start site region 124853
Tssr124854 14 30716878 to 30716882 4 + TSS region transcription start site region 124854
Tssr127889 14 30716923 to 30716955 32 - TSS region transcription start site region 127889
Tssr124855 14 30719828 to 30719832 4 + TSS region transcription start site region 124855
Tssr124856 14 30732877 to 30732882 5 + TSS region transcription start site region 124856
Tssr124857 14 30743803 to 30743808 5 + TSS region transcription start site region 124857
1700087M22Rik 14 30770681 to 30778004 7323 - antisense lncRNA gene RIKEN cDNA 1700087M22 gene
Gm15667 14 30804379 to 30805160 781 + pseudogene predicted gene 15667
Tssr124858 14 30819172 to 30819197 25 + TSS region transcription start site region 124858
Cpgi6277 14 30825285 to 30826323 1038 CpG island CpG island 6277
Tssr124859 14 30825568 to 30825574 6 + TSS region transcription start site region 124859
Tssr124860 14 30825580 to 30825640 60 + TSS region transcription start site region 124860
Stimate 14 30825594 to 30877210 51616 + protein coding gene STIM activating enhancer
Tssr124861 14 30825657 to 30825665 8 + TSS region transcription start site region 124861
Tssr124862 14 30825667 to 30825677 10 + TSS region transcription start site region 124862
Tssr124863 14 30825825 to 30825857 32 + TSS region transcription start site region 124863