Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30349872-30589883

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Appd2 14 16523711 to 30392905 13869194 QTL APP associated premature death 2
Cacna1d 14 30039941 to 30491156 451215 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1D subunit
Cpgi6269 14 30352212 to 30352468 256 CpG island CpG island 6269
Cpgi6270 14 30352778 to 30354247 1469 CpG island CpG island 6270
Tssr127853 14 30353468 to 30353535 67 - TSS region transcription start site region 127853
Tssr127854 14 30353574 to 30353603 29 - TSS region transcription start site region 127854
Tssr127855 14 30363896 to 30363897 1 - TSS region transcription start site region 127855
Tssr127856 14 30378412 to 30378417 5 - TSS region transcription start site region 127856
Gm18072 14 30383806 to 30384354 548 - pseudogene predicted gene, 18072
D14Mit127 14 30392757 to 30392905 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 127
Gm47576 14 30397994 to 30398443 449 + pseudogene predicted gene, 47576
Gm7621 14 30402002 to 30402988 986 + pseudogene predicted gene 7621
Cpgi6271 14 30416879 to 30417083 204 CpG island CpG island 6271
Gm18681 14 30423265 to 30423873 608 + pseudogene predicted gene, 18681
Tssr127857 14 30434098 to 30434115 17 - TSS region transcription start site region 127857
4831407H17Rik 14 30458036 to 30463282 5246 + lncRNA gene RIKEN cDNA 4831407H17 gene
Tssr127858 14 30469872 to 30469883 11 - TSS region transcription start site region 127858
Tssr127859 14 30469886 to 30469895 9 - TSS region transcription start site region 127859
Tssr127860 14 30469899 to 30469911 12 - TSS region transcription start site region 127860
Cpgi6272 14 30479255 to 30480115 860 CpG island CpG island 6272
Dcp1a 14 30479535 to 30527063 47528 + protein coding gene decapping mRNA 1A
Tssr124825 14 30479620 to 30479685 65 + TSS region transcription start site region 124825
Gm35566 14 30484594 to 30488591 3997 + lncRNA gene predicted gene, 35566
Tssr124826 14 30485071 to 30485087 16 + TSS region transcription start site region 124826
Tssr4361 14 30485098 to 30485107 9 + TSS region transcription start site region 4361
Tssr127861 14 30491451 to 30491458 7 - TSS region transcription start site region 127861
Tssr127862 14 30491488 to 30491506 18 - TSS region transcription start site region 127862
Cpgi6273 14 30548980 to 30550090 1110 CpG island CpG island 6273
Tkt 14 30549131 to 30574724 25593 + protein coding gene transketolase
Tssr124827 14 30549139 to 30549159 20 + TSS region transcription start site region 124827
Tssr124828 14 30549163 to 30549188 25 + TSS region transcription start site region 124828
Tssr124829 14 30558711 to 30558728 17 + TSS region transcription start site region 124829
Tssr124830 14 30558787 to 30558805 18 + TSS region transcription start site region 124830
Tssr124831 14 30559780 to 30559799 19 + TSS region transcription start site region 124831
Tssr124832 14 30565509 to 30565561 52 + TSS region transcription start site region 124832
Tssr124833 14 30565606 to 30565635 29 + TSS region transcription start site region 124833
Tssr124834 14 30568176 to 30568209 33 + TSS region transcription start site region 124834
Tssr124835 14 30570958 to 30570975 17 + TSS region transcription start site region 124835
Mir3076 14 30572149 to 30572208 59 + miRNA gene microRNA 3076
Tssr127863 14 30573609 to 30573611 2 - TSS region transcription start site region 127863