Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:29703817-30313835

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Cpgi6265 14 29721340 to 29723204 1864 CpG island CpG island 6265
Tssr127824 14 29721783 to 29721801 18 - TSS region transcription start site region 127824
Tssr127825 14 29721835 to 29721886 51 - TSS region transcription start site region 127825
Tssr127826 14 29721890 to 29721912 22 - TSS region transcription start site region 127826
Tssr127827 14 29722579 to 29722598 19 - TSS region transcription start site region 127827
Gm48058 14 29732366 to 29733395 1029 - lincRNA gene predicted gene, 48058
Gm41118 14 29735344 to 29745625 10281 + lincRNA gene predicted gene, 41118
Gm35281 14 29786837 to 29796975 10138 - lincRNA gene predicted gene, 35281
1700052M09Rik 14 29840856 to 29841730 874 unclassified gene RIKEN cDNA 1700052M09 gene
Tssr127828 14 29852347 to 29852370 23 - TSS region transcription start site region 127828
Gm7633 14 29902950 to 29904390 1440 + pseudogene predicted gene 7633
Gm47414 14 29958071 to 29961381 3310 - lincRNA gene predicted gene, 47414
Cpgi6266 14 29968047 to 29968899 852 CpG island CpG island 6266
Tssr127829 14 29968158 to 29968240 82 - TSS region transcription start site region 127829
Tssr124803 14 29968317 to 29968334 17 + TSS region transcription start site region 124803
Tssr124804 14 29968350 to 29968361 11 + TSS region transcription start site region 124804
Tssr124805 14 29968369 to 29968462 93 + TSS region transcription start site region 124805
Selenok 14 29968380 to 29975074 6694 + protein coding gene selenoprotein K
Cpgi6267 14 29978286 to 29978785 499 CpG island CpG island 6267
Actr8 14 29978331 to 29993221 14890 + protein coding gene ARP8 actin-related protein 8
Tssr124806 14 29978346 to 29978357 11 + TSS region transcription start site region 124806
Tssr124807 14 29978373 to 29978418 45 + TSS region transcription start site region 124807
Tssr124808 14 29978423 to 29978434 11 + TSS region transcription start site region 124808
Mir6947 14 29988888 to 29988952 64 + miRNA gene microRNA 6947
Il17rb 14 29996168 to 30008896 12728 - protein coding gene interleukin 17 receptor B
Cpgi6268 14 30008633 to 30009284 651 CpG island CpG island 6268
Tssr127830 14 30008780 to 30008796 16 - TSS region transcription start site region 127830
Tssr127831 14 30008817 to 30008835 18 - TSS region transcription start site region 127831
Tssr127832 14 30008836 to 30008846 10 - TSS region transcription start site region 127832
Tssr127833 14 30008867 to 30008885 18 - TSS region transcription start site region 127833
Tssr124809 14 30008893 to 30008901 8 + TSS region transcription start site region 124809
Tssr124810 14 30008929 to 30008944 15 + TSS region transcription start site region 124810
Tssr124811 14 30008950 to 30008961 11 + TSS region transcription start site region 124811
Tssr127834 14 30008978 to 30008999 21 - TSS region transcription start site region 127834
Chdh 14 30009000 to 30040466 31466 + protein coding gene choline dehydrogenase
Tssr124812 14 30009018 to 30009030 12 + TSS region transcription start site region 124812
Tssr124813 14 30009036 to 30009057 21 + TSS region transcription start site region 124813
Tssr124814 14 30009076 to 30009092 16 + TSS region transcription start site region 124814
Tssr124815 14 30009095 to 30009110 15 + TSS region transcription start site region 124815
Tssr124816 14 30009115 to 30009146 31 + TSS region transcription start site region 124816
Tssr124817 14 30009162 to 30009174 12 + TSS region transcription start site region 124817
Tssr127835 14 30009283 to 30009293 10 - TSS region transcription start site region 127835
Tssr127836 14 30009301 to 30009340 39 - TSS region transcription start site region 127836
Tssr127837 14 30009358 to 30009367 9 - TSS region transcription start site region 127837
Tssr124818 14 30010085 to 30010099 14 + TSS region transcription start site region 124818
Tssr124819 14 30010323 to 30010343 20 + TSS region transcription start site region 124819
Tssr124820 14 30015477 to 30015496 19 + TSS region transcription start site region 124820
Gm35449 14 30017415 to 30021248 3833 - lncRNA gene predicted gene, 35449
Tssr127838 14 30019908 to 30019914 6 - TSS region transcription start site region 127838
Tssr124821 14 30022750 to 30022776 26 + TSS region transcription start site region 124821
Tssr127839 14 30024589 to 30024616 27 - TSS region transcription start site region 127839
Tssr124822 14 30024947 to 30024954 7 + TSS region transcription start site region 124822
Tssr124823 14 30025663 to 30025676 13 + TSS region transcription start site region 124823
Gm18760 14 30027687 to 30028351 664 - pseudogene predicted gene, 18760
Cacna1d 14 30039941 to 30491156 451215 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1D subunit
Tssr127840 14 30056325 to 30056339 14 - TSS region transcription start site region 127840
Tssr127841 14 30056350 to 30056359 9 - TSS region transcription start site region 127841
Tssr127842 14 30056379 to 30056384 5 - TSS region transcription start site region 127842
Tssr127843 14 30094880 to 30094884 4 - TSS region transcription start site region 127843
Tssr127844 14 30125091 to 30125140 49 - TSS region transcription start site region 127844
Tssr124824 14 30131549 to 30131557 8 + TSS region transcription start site region 124824
Tssr4360 14 30148352 to 30148356 4 - TSS region transcription start site region 4360
Tssr127845 14 30160782 to 30160788 6 - TSS region transcription start site region 127845
Tssr127846 14 30177415 to 30177420 5 - TSS region transcription start site region 127846
Tssr127847 14 30206127 to 30206131 4 - TSS region transcription start site region 127847
Gm47570 14 30207738 to 30208219 481 + pseudogene predicted gene, 47570
Tssr127848 14 30217005 to 30217009 4 - TSS region transcription start site region 127848
Tssr127849 14 30278027 to 30278030 3 - TSS region transcription start site region 127849
Tssr127850 14 30297299 to 30297306 7 - TSS region transcription start site region 127850