Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:28969435-29989437

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Tssr127819 14 28969466 to 28969476 10 - TSS region transcription start site region 127819
Gm23999 14 29009696 to 29009799 103 - rRNA gene predicted gene, 23999
Tssr124795 14 29018077 to 29018082 5 + TSS region transcription start site region 124795
Tssr124796 14 29018107 to 29018119 12 + TSS region transcription start site region 124796
Tssr124797 14 29018205 to 29018226 21 + TSS region transcription start site region 124797
Lrtm1 14 29018208 to 29033642 15434 + protein coding gene leucine-rich repeats and transmembrane domains 1
Tssr124798 14 29018236 to 29018243 7 + TSS region transcription start site region 124798
Tssr124799 14 29018245 to 29018278 33 + TSS region transcription start site region 124799
Tssr127820 14 29018317 to 29018321 4 - TSS region transcription start site region 127820
Tssr124800 14 29021403 to 29021413 10 + TSS region transcription start site region 124800
Tssr124801 14 29021434 to 29021444 10 + TSS region transcription start site region 124801
Gm48004 14 29081302 to 29083805 2503 + antisense lncRNA gene predicted gene, 48004
Gm6043 14 29217639 to 29218130 491 + pseudogene predicted gene 6043
Gm48006 14 29235227 to 29257521 22294 + antisense lncRNA gene predicted gene, 48006
Gm48005 14 29270287 to 29270467 180 + pseudogene predicted gene, 48005
Tssr4357 14 29309993 to 29309999 6 + TSS region transcription start site region 4357
D14Mit186 14 29429696 to 29429830 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 186
Tssr127821 14 29432274 to 29432276 2 - TSS region transcription start site region 127821
D14Mit173 14 29461839 to 29461988 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173
D14Mit173.1 14 29461966 to 29462132 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173.1
Tssr4358 14 29479435 to 29479437 2 + TSS region transcription start site region 4358
Tssr124802 14 29486595 to 29486597 2 + TSS region transcription start site region 124802
Dyscalc4 14 29490914 to 29491050 136 QTL dystrophic cardiac calcinosis 4
D14Mit133 14 29490914 to 29491050 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 133
Tssr127822 14 29501039 to 29501041 2 - TSS region transcription start site region 127822
Tssr127823 14 29529651 to 29529652 1 - TSS region transcription start site region 127823
Gm48003 14 29574697 to 29593304 18607 + antisense lncRNA gene predicted gene, 48003
D14Mit14 14 29668256 to 29668520 264 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 14
Tssr4359 14 29669434 to 29669436 2 + TSS region transcription start site region 4359
Cpgi6265 14 29721340 to 29723204 1864 CpG island CpG island 6265
Tssr127824 14 29721783 to 29721801 18 - TSS region transcription start site region 127824
Tssr127825 14 29721835 to 29721886 51 - TSS region transcription start site region 127825
Tssr127826 14 29721890 to 29721912 22 - TSS region transcription start site region 127826
Tssr127827 14 29722579 to 29722598 19 - TSS region transcription start site region 127827
Gm48058 14 29732366 to 29733395 1029 - lincRNA gene predicted gene, 48058
Gm41118 14 29735344 to 29745625 10281 + lincRNA gene predicted gene, 41118
Gm35281 14 29786837 to 29796975 10138 - lincRNA gene predicted gene, 35281
1700052M09Rik 14 29840856 to 29841730 874 unclassified gene RIKEN cDNA 1700052M09 gene
Tssr127828 14 29852347 to 29852370 23 - TSS region transcription start site region 127828
Gm7633 14 29902950 to 29904390 1440 + pseudogene predicted gene 7633
Gm47414 14 29958071 to 29961381 3310 - lincRNA gene predicted gene, 47414
Cpgi6266 14 29968047 to 29968899 852 CpG island CpG island 6266
Tssr127829 14 29968158 to 29968240 82 - TSS region transcription start site region 127829
Tssr124803 14 29968317 to 29968334 17 + TSS region transcription start site region 124803
Tssr124804 14 29968350 to 29968361 11 + TSS region transcription start site region 124804
Tssr124805 14 29968369 to 29968462 93 + TSS region transcription start site region 124805
Selenok 14 29968380 to 29975074 6694 + protein coding gene selenoprotein K
Cpgi6267 14 29978286 to 29978785 499 CpG island CpG island 6267
Actr8 14 29978331 to 29993221 14890 + protein coding gene ARP8 actin-related protein 8
Tssr124806 14 29978346 to 29978357 11 + TSS region transcription start site region 124806
Tssr124807 14 29978373 to 29978418 45 + TSS region transcription start site region 124807
Tssr124808 14 29978423 to 29978434 11 + TSS region transcription start site region 124808
Mir6947 14 29988888 to 29988952 64 + miRNA gene microRNA 6947