Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:28914435-30044437

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Tssr127818 14 28969374 to 28969381 7 - TSS region transcription start site region 127818
Tssr127819 14 28969466 to 28969476 10 - TSS region transcription start site region 127819
Gm23999 14 29009696 to 29009799 103 - rRNA gene predicted gene, 23999
Tssr124795 14 29018077 to 29018082 5 + TSS region transcription start site region 124795
Tssr124796 14 29018107 to 29018119 12 + TSS region transcription start site region 124796
Tssr124797 14 29018205 to 29018226 21 + TSS region transcription start site region 124797
Lrtm1 14 29018208 to 29033642 15434 + protein coding gene leucine-rich repeats and transmembrane domains 1
Tssr124798 14 29018236 to 29018243 7 + TSS region transcription start site region 124798
Tssr124799 14 29018245 to 29018278 33 + TSS region transcription start site region 124799
Tssr127820 14 29018317 to 29018321 4 - TSS region transcription start site region 127820
Tssr124800 14 29021403 to 29021413 10 + TSS region transcription start site region 124800
Tssr124801 14 29021434 to 29021444 10 + TSS region transcription start site region 124801
Gm48004 14 29081302 to 29083805 2503 + antisense lncRNA gene predicted gene, 48004
Gm6043 14 29217639 to 29218130 491 + pseudogene predicted gene 6043
Gm48006 14 29235227 to 29257521 22294 + antisense lncRNA gene predicted gene, 48006
Gm48005 14 29270287 to 29270467 180 + pseudogene predicted gene, 48005
Tssr4357 14 29309993 to 29309999 6 + TSS region transcription start site region 4357
D14Mit186 14 29429696 to 29429830 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 186
Tssr127821 14 29432274 to 29432276 2 - TSS region transcription start site region 127821
D14Mit173 14 29461839 to 29461988 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173
D14Mit173.1 14 29461966 to 29462132 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173.1
Tssr4358 14 29479435 to 29479437 2 + TSS region transcription start site region 4358
Tssr124802 14 29486595 to 29486597 2 + TSS region transcription start site region 124802
D14Mit133 14 29490914 to 29491050 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 133
Dyscalc4 14 29490914 to 29491050 136 QTL dystrophic cardiac calcinosis 4
Tssr127822 14 29501039 to 29501041 2 - TSS region transcription start site region 127822
Tssr127823 14 29529651 to 29529652 1 - TSS region transcription start site region 127823
Gm48003 14 29574697 to 29593304 18607 + antisense lncRNA gene predicted gene, 48003
D14Mit14 14 29668256 to 29668520 264 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 14
Tssr4359 14 29669434 to 29669436 2 + TSS region transcription start site region 4359
Cpgi6265 14 29721340 to 29723204 1864 CpG island CpG island 6265
Tssr127824 14 29721783 to 29721801 18 - TSS region transcription start site region 127824
Tssr127825 14 29721835 to 29721886 51 - TSS region transcription start site region 127825
Tssr127826 14 29721890 to 29721912 22 - TSS region transcription start site region 127826
Tssr127827 14 29722579 to 29722598 19 - TSS region transcription start site region 127827
Gm48058 14 29732366 to 29733395 1029 - lincRNA gene predicted gene, 48058
Gm41118 14 29735344 to 29745625 10281 + lincRNA gene predicted gene, 41118
Gm35281 14 29786837 to 29796975 10138 - lincRNA gene predicted gene, 35281
1700052M09Rik 14 29840856 to 29841730 874 unclassified gene RIKEN cDNA 1700052M09 gene
Tssr127828 14 29852347 to 29852370 23 - TSS region transcription start site region 127828
Gm7633 14 29902950 to 29904390 1440 + pseudogene predicted gene 7633
Gm47414 14 29958071 to 29961381 3310 - lincRNA gene predicted gene, 47414
Cpgi6266 14 29968047 to 29968899 852 CpG island CpG island 6266
Tssr127829 14 29968158 to 29968240 82 - TSS region transcription start site region 127829
Tssr124803 14 29968317 to 29968334 17 + TSS region transcription start site region 124803
Tssr124804 14 29968350 to 29968361 11 + TSS region transcription start site region 124804
Tssr124805 14 29968369 to 29968462 93 + TSS region transcription start site region 124805
Selenok 14 29968380 to 29975074 6694 + protein coding gene selenoprotein K
Cpgi6267 14 29978286 to 29978785 499 CpG island CpG island 6267
Actr8 14 29978331 to 29993221 14890 + protein coding gene ARP8 actin-related protein 8
Tssr124806 14 29978346 to 29978357 11 + TSS region transcription start site region 124806
Tssr124807 14 29978373 to 29978418 45 + TSS region transcription start site region 124807
Tssr124808 14 29978423 to 29978434 11 + TSS region transcription start site region 124808
Mir6947 14 29988888 to 29988952 64 + miRNA gene microRNA 6947
Il17rb 14 29996168 to 30008896 12728 - protein coding gene interleukin 17 receptor B
Cpgi6268 14 30008633 to 30009284 651 CpG island CpG island 6268
Tssr127830 14 30008780 to 30008796 16 - TSS region transcription start site region 127830
Tssr127831 14 30008817 to 30008835 18 - TSS region transcription start site region 127831
Tssr127832 14 30008836 to 30008846 10 - TSS region transcription start site region 127832
Tssr127833 14 30008867 to 30008885 18 - TSS region transcription start site region 127833
Tssr124809 14 30008893 to 30008901 8 + TSS region transcription start site region 124809
Tssr124810 14 30008929 to 30008944 15 + TSS region transcription start site region 124810
Tssr124811 14 30008950 to 30008961 11 + TSS region transcription start site region 124811
Tssr127834 14 30008978 to 30008999 21 - TSS region transcription start site region 127834
Chdh 14 30009000 to 30040466 31466 + protein coding gene choline dehydrogenase
Tssr124812 14 30009018 to 30009030 12 + TSS region transcription start site region 124812
Tssr124813 14 30009036 to 30009057 21 + TSS region transcription start site region 124813
Tssr124814 14 30009076 to 30009092 16 + TSS region transcription start site region 124814
Tssr124815 14 30009095 to 30009110 15 + TSS region transcription start site region 124815
Tssr124816 14 30009115 to 30009146 31 + TSS region transcription start site region 124816
Tssr124817 14 30009162 to 30009174 12 + TSS region transcription start site region 124817
Tssr127835 14 30009283 to 30009293 10 - TSS region transcription start site region 127835
Tssr127836 14 30009301 to 30009340 39 - TSS region transcription start site region 127836
Tssr127837 14 30009358 to 30009367 9 - TSS region transcription start site region 127837
Tssr124818 14 30010085 to 30010099 14 + TSS region transcription start site region 124818
Tssr124819 14 30010323 to 30010343 20 + TSS region transcription start site region 124819
Tssr124820 14 30015477 to 30015496 19 + TSS region transcription start site region 124820
Gm35449 14 30017415 to 30021248 3833 - lncRNA gene predicted gene, 35449
Tssr127838 14 30019908 to 30019914 6 - TSS region transcription start site region 127838
Tssr124821 14 30022750 to 30022776 26 + TSS region transcription start site region 124821
Tssr127839 14 30024589 to 30024616 27 - TSS region transcription start site region 127839
Tssr124822 14 30024947 to 30024954 7 + TSS region transcription start site region 124822
Tssr124823 14 30025663 to 30025676 13 + TSS region transcription start site region 124823
Gm18760 14 30027687 to 30028351 664 - pseudogene predicted gene, 18760
Cacna1d 14 30039941 to 30491156 451215 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1D subunit