Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:28563208-29488642

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm35164 14 28649662 to 28698049 48387 + lincRNA gene predicted gene, 35164
Tssr124794 14 28649697 to 28649717 20 + TSS region transcription start site region 124794
Tssr127816 14 28674814 to 28674819 5 - TSS region transcription start site region 127816
Gm18079 14 28724375 to 28725259 884 + pseudogene predicted gene, 18079
Gm35217 14 28777427 to 28798421 20994 - lincRNA gene predicted gene, 35217
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Tssr127817 14 28909052 to 28909056 4 - TSS region transcription start site region 127817
Tssr127818 14 28969374 to 28969381 7 - TSS region transcription start site region 127818
Tssr127819 14 28969466 to 28969476 10 - TSS region transcription start site region 127819
Gm23999 14 29009696 to 29009799 103 - rRNA gene predicted gene, 23999
Tssr124795 14 29018077 to 29018082 5 + TSS region transcription start site region 124795
Tssr124796 14 29018107 to 29018119 12 + TSS region transcription start site region 124796
Tssr124797 14 29018205 to 29018226 21 + TSS region transcription start site region 124797
Lrtm1 14 29018208 to 29033642 15434 + protein coding gene leucine-rich repeats and transmembrane domains 1
Tssr124798 14 29018236 to 29018243 7 + TSS region transcription start site region 124798
Tssr124799 14 29018245 to 29018278 33 + TSS region transcription start site region 124799
Tssr127820 14 29018317 to 29018321 4 - TSS region transcription start site region 127820
Tssr124800 14 29021403 to 29021413 10 + TSS region transcription start site region 124800
Tssr124801 14 29021434 to 29021444 10 + TSS region transcription start site region 124801
Gm48004 14 29081302 to 29083805 2503 + antisense lncRNA gene predicted gene, 48004
Gm6043 14 29217639 to 29218130 491 + pseudogene predicted gene 6043
Gm48006 14 29235227 to 29257521 22294 + antisense lncRNA gene predicted gene, 48006
Gm48005 14 29270287 to 29270467 180 + pseudogene predicted gene, 48005
Tssr4357 14 29309993 to 29309999 6 + TSS region transcription start site region 4357
D14Mit186 14 29429696 to 29429830 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 186
Tssr127821 14 29432274 to 29432276 2 - TSS region transcription start site region 127821
D14Mit173 14 29461839 to 29461988 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173
D14Mit173.1 14 29461966 to 29462132 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173.1
Tssr4358 14 29479435 to 29479437 2 + TSS region transcription start site region 4358
Tssr124802 14 29486595 to 29486597 2 + TSS region transcription start site region 124802