Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:28438236-29598243

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Erc2 14 27622428 to 28478537 856109 + protein coding gene ELKS/RAB6-interacting/CAST family member 2
Tssr124777 14 28443392 to 28443402 10 + TSS region transcription start site region 124777
Tssr124778 14 28504565 to 28504605 40 + TSS region transcription start site region 124778
Tssr124779 14 28504634 to 28504656 22 + TSS region transcription start site region 124779
Cpgi6258 14 28504656 to 28506883 2227 CpG island CpG island 6258
Tssr124780 14 28504678 to 28504689 11 + TSS region transcription start site region 124780
Tssr124781 14 28504736 to 28504762 26 + TSS region transcription start site region 124781
Tssr124782 14 28504796 to 28504826 30 + TSS region transcription start site region 124782
Tssr124783 14 28505463 to 28505491 28 + TSS region transcription start site region 124783
Wnt5a 14 28505473 to 28527448 21975 + protein coding gene wingless-type MMTV integration site family, member 5A
Tssr124784 14 28505495 to 28505509 14 + TSS region transcription start site region 124784
Tssr124785 14 28505542 to 28505569 27 + TSS region transcription start site region 124785
Tssr124786 14 28505606 to 28505617 11 + TSS region transcription start site region 124786
Tssr124787 14 28505759 to 28505772 13 + TSS region transcription start site region 124787
Tssr124788 14 28505781 to 28505797 16 + TSS region transcription start site region 124788
Tssr124789 14 28505817 to 28505835 18 + TSS region transcription start site region 124789
Cpgi6259 14 28507592 to 28507811 219 CpG island CpG island 6259
Gm2670 14 28508074 to 28511392 3318 - antisense lncRNA gene predicted gene 2670
Cpgi6260 14 28509070 to 28509850 780 CpG island CpG island 6260
Tssr124790 14 28509790 to 28509820 30 + TSS region transcription start site region 124790
Tssr124791 14 28510098 to 28510119 21 + TSS region transcription start site region 124791
Cpgi6261 14 28510463 to 28510834 371 CpG island CpG island 6261
Cpgi6262 14 28511313 to 28511639 326 CpG island CpG island 6262
Tssr124792 14 28511344 to 28511381 37 + TSS region transcription start site region 124792
Cpgi6263 14 28518127 to 28518616 489 CpG island CpG island 6263
Cpgi6264 14 28522454 to 28522931 477 CpG island CpG island 6264
Tssr124793 14 28526179 to 28526195 16 + TSS region transcription start site region 124793
Gm35164 14 28649662 to 28698049 48387 + lincRNA gene predicted gene, 35164
Tssr124794 14 28649697 to 28649717 20 + TSS region transcription start site region 124794
Tssr127816 14 28674814 to 28674819 5 - TSS region transcription start site region 127816
Gm18079 14 28724375 to 28725259 884 + pseudogene predicted gene, 18079
Gm35217 14 28777427 to 28798421 20994 - lincRNA gene predicted gene, 35217
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Tssr127817 14 28909052 to 28909056 4 - TSS region transcription start site region 127817
Tssr127818 14 28969374 to 28969381 7 - TSS region transcription start site region 127818
Tssr127819 14 28969466 to 28969476 10 - TSS region transcription start site region 127819
Gm23999 14 29009696 to 29009799 103 - rRNA gene predicted gene, 23999
Tssr124795 14 29018077 to 29018082 5 + TSS region transcription start site region 124795
Tssr124796 14 29018107 to 29018119 12 + TSS region transcription start site region 124796
Tssr124797 14 29018205 to 29018226 21 + TSS region transcription start site region 124797
Lrtm1 14 29018208 to 29033642 15434 + protein coding gene leucine-rich repeats and transmembrane domains 1
Tssr124798 14 29018236 to 29018243 7 + TSS region transcription start site region 124798
Tssr124799 14 29018245 to 29018278 33 + TSS region transcription start site region 124799
Tssr127820 14 29018317 to 29018321 4 - TSS region transcription start site region 127820
Tssr124800 14 29021403 to 29021413 10 + TSS region transcription start site region 124800
Tssr124801 14 29021434 to 29021444 10 + TSS region transcription start site region 124801
Gm48004 14 29081302 to 29083805 2503 + antisense lncRNA gene predicted gene, 48004
Gm6043 14 29217639 to 29218130 491 + pseudogene predicted gene 6043
Gm48006 14 29235227 to 29257521 22294 + antisense lncRNA gene predicted gene, 48006
Gm48005 14 29270287 to 29270467 180 + pseudogene predicted gene, 48005
Tssr4357 14 29309993 to 29309999 6 + TSS region transcription start site region 4357
D14Mit186 14 29429696 to 29429830 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 186
Tssr127821 14 29432274 to 29432276 2 - TSS region transcription start site region 127821
D14Mit173 14 29461839 to 29461988 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173
D14Mit173.1 14 29461966 to 29462132 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 173.1
Tssr4358 14 29479435 to 29479437 2 + TSS region transcription start site region 4358
Tssr124802 14 29486595 to 29486597 2 + TSS region transcription start site region 124802
Dyscalc4 14 29490914 to 29491050 136 QTL dystrophic cardiac calcinosis 4
D14Mit133 14 29490914 to 29491050 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 133
Tssr127822 14 29501039 to 29501041 2 - TSS region transcription start site region 127822
Tssr127823 14 29529651 to 29529652 1 - TSS region transcription start site region 127823
Gm48003 14 29574697 to 29593304 18607 + antisense lncRNA gene predicted gene, 48003