Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:27401669-28359501

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgef3 14 27114899 to 27403911 289012 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 3
Tssr124751 14 27403136 to 27403150 14 + TSS region transcription start site region 124751
Tssr124752 14 27403340 to 27403343 3 + TSS region transcription start site region 124752
Cpgi6255 14 27428428 to 27429824 1396 CpG island CpG island 6255
Tssr127812 14 27428655 to 27428682 27 - TSS region transcription start site region 127812
Tssr124753 14 27428790 to 27428874 84 + TSS region transcription start site region 124753
Tasor 14 27428840 to 27483555 54715 + protein coding gene transcription activation suppressor
Tssr124754 14 27428878 to 27428890 12 + TSS region transcription start site region 124754
Tssr127813 14 27429301 to 27429346 45 - TSS region transcription start site region 127813
Tssr124755 14 27429971 to 27429975 4 + TSS region transcription start site region 124755
Tssr124756 14 27431341 to 27431346 5 + TSS region transcription start site region 124756
Tssr124757 14 27438832 to 27438836 4 + TSS region transcription start site region 124757
Ccdc66 14 27481090 to 27508460 27370 - protein coding gene coiled-coil domain containing 66
Gm22485 14 27489269 to 27489377 108 + snRNA gene predicted gene, 22485
Cpgi6256 14 27508072 to 27508655 583 CpG island CpG island 6256
Tssr127814 14 27508463 to 27508503 40 - TSS region transcription start site region 127814
Gm25697 14 27527751 to 27527848 97 - snoRNA gene predicted gene, 25697
Gm7604 14 27551188 to 27552152 964 - pseudogene predicted gene 7604
Tssr4355 14 27555375 to 27555381 6 - TSS region transcription start site region 4355
Cpgi6257 14 27621791 to 27623006 1215 CpG island CpG island 6257
Tssr124758 14 27622326 to 27622368 42 + TSS region transcription start site region 124758
Tssr124759 14 27622386 to 27622412 26 + TSS region transcription start site region 124759
Erc2 14 27622428 to 28478537 856109 + protein coding gene ELKS/RAB6-interacting/CAST family member 2
Tssr124760 14 27622433 to 27622543 110 + TSS region transcription start site region 124760
Tssr124761 14 27623640 to 27623698 58 + TSS region transcription start site region 124761
Gm18398 14 27714377 to 27715877 1500 + pseudogene predicted gene, 18398
Tssr4356 14 27745648 to 27745650 2 + TSS region transcription start site region 4356
Tssr124762 14 27768561 to 27768563 2 + TSS region transcription start site region 124762
Gm45645 14 27838165 to 27876217 38052 - antisense lncRNA gene predicted gene 45645
Tssr124763 14 27876065 to 27876104 39 + TSS region transcription start site region 124763
Tssr124764 14 27876142 to 27876153 11 + TSS region transcription start site region 124764
Tssr124765 14 27876159 to 27876172 13 + TSS region transcription start site region 124765
Tssr124766 14 27876393 to 27876420 27 + TSS region transcription start site region 124766
Tssr124767 14 27876521 to 27876541 20 + TSS region transcription start site region 124767
Gm34996 14 27876669 to 27884501 7832 + lncRNA gene predicted gene, 34996
Tssr124768 14 28008239 to 28008242 3 + TSS region transcription start site region 124768
Tssr124769 14 28029318 to 28029322 4 + TSS region transcription start site region 124769
Tssr124770 14 28030385 to 28030393 8 + TSS region transcription start site region 124770
Tssr124771 14 28031475 to 28031479 4 + TSS region transcription start site region 124771
Tssr124772 14 28057390 to 28057393 3 + TSS region transcription start site region 124772
Tssr124773 14 28152336 to 28152338 2 + TSS region transcription start site region 124773
Recrq10 14 28200000 to 60900000 32700000 QTL recombination rate in male meiosis QTL 10
D14Mit44 14 28240651 to 28240799 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 44
Tssr124774 14 28284567 to 28284570 3 + TSS region transcription start site region 124774
Tssr127815 14 28308720 to 28308731 11 - TSS region transcription start site region 127815